RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 GNL3LQ9NVN8 582 aaKnown RBP19.26■□□□□ 0.67
CAPN1-213ENST00000527897 PHKA1P46020 1223 aa19.25■□□□□ 0.67
CAPN1-213ENST00000527897 TIMM10P62072 90 aa19.25■□□□□ 0.67
CAPN1-213ENST00000527897 FZD1Q9UP38 647 aa19.25■□□□□ 0.67
CAPN1-213ENST00000527897 FAM155AB1AL88 458 aaPredicted RBP19.24■□□□□ 0.67
CAPN1-213ENST00000527897 HSPA8P11142 646 aaKnown RBP19.24■□□□□ 0.67
CAPN1-213ENST00000527897 G3BP1Q13283 466 aaKnown RBP eCLIP19.24■□□□□ 0.677e-8■■■□□ 15.6
CAPN1-213ENST00000527897 IFFO2Q5TF58 517 aa19.24■□□□□ 0.67
CAPN1-213ENST00000527897 WDR66Q8TBY9 1149 aa19.24■□□□□ 0.67
CAPN1-213ENST00000527897 PANK1Q8TE04 598 aa19.24■□□□□ 0.67
CAPN1-213ENST00000527897 TEKT1Q969V4 418 aa19.24■□□□□ 0.67
CAPN1-213ENST00000527897 NEUROD6Q96NK8 337 aa19.24■□□□□ 0.67
CAPN1-213ENST00000527897 ZNF70Q9UC06 446 aaPredicted RBP19.24■□□□□ 0.67
CAPN1-213ENST00000527897 ANGEL1Q9UNK9 670 aaKnown RBP19.24■□□□□ 0.67
CAPN1-213ENST00000527897 COL1A1P02452 1464 aaPredicted RBP19.23■□□□□ 0.67
CAPN1-213ENST00000527897 A0A1B0GUL7 405 aa19.23■□□□□ 0.67
CAPN1-213ENST00000527897 TCP10L2B9ZVM9 353 aa19.23■□□□□ 0.67
CAPN1-213ENST00000527897 SLC10A3P09131 477 aa19.23■□□□□ 0.67
CAPN1-213ENST00000527897 KIF23Q02241 960 aaPredicted RBP19.23■□□□□ 0.67
CAPN1-213ENST00000527897 ARMC9Q7Z3E5 817 aa19.23■□□□□ 0.67
CAPN1-213ENST00000527897 AKAP2Q9Y2D5 859 aa19.23■□□□□ 0.67
CAPN1-213ENST00000527897 MAST3O60307 1309 aa19.23■□□□□ 0.67
CAPN1-213ENST00000527897 MKRN3Q13064 507 aaKnown RBP19.22■□□□□ 0.67
CAPN1-213ENST00000527897 OS9Q13438 667 aaPredicted RBP19.22■□□□□ 0.67
CAPN1-213ENST00000527897 RASA3Q14644 834 aa19.22■□□□□ 0.67
CAPN1-213ENST00000527897 SPDYE2Q495Y8 402 aa19.22■□□□□ 0.67
CAPN1-213ENST00000527897 RASAL3Q86YV0 1011 aa19.22■□□□□ 0.67
CAPN1-213ENST00000527897 PRDM10Q9NQV6 1147 aa19.22■□□□□ 0.67
CAPN1-213ENST00000527897 PPP2R3BQ9Y5P8 575 aa19.22■□□□□ 0.67
CAPN1-213ENST00000527897 CACNB3P54284 484 aa19.21■□□□□ 0.67
CAPN1-213ENST00000527897 TNFAIP1Q13829 316 aa19.21■□□□□ 0.67
CAPN1-213ENST00000527897 GORABQ5T7V8 394 aa19.21■□□□□ 0.67
CAPN1-213ENST00000527897 NBPF12Q5TAG4 269 aaPredicted RBP19.21■□□□□ 0.67
CAPN1-213ENST00000527897 CCDC102BQ68D86 513 aa19.21■□□□□ 0.67
CAPN1-213ENST00000527897 XAGE2Q96GT9 111 aa19.21■□□□□ 0.67
CAPN1-213ENST00000527897 DENND2AQ9ULE3 1009 aa19.21■□□□□ 0.67
CAPN1-213ENST00000527897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.21■□□□□ 0.67
CAPN1-213ENST00000527897 ZBTB7BO15156 539 aaPredicted RBP19.2■□□□□ 0.66
CAPN1-213ENST00000527897 HDLBPQ00341 1268 aaKnown RBP19.2■□□□□ 0.66
CAPN1-213ENST00000527897 SUPT20HL1Q3ZLR7 823 aa19.2■□□□□ 0.66
CAPN1-213ENST00000527897 RCAN3Q9UKA8 241 aa19.2■□□□□ 0.66
CAPN1-213ENST00000527897 SUGT1Q9Y2Z0 365 aa19.2■□□□□ 0.66
CAPN1-213ENST00000527897 PPP1R12BO60237 982 aaPredicted RBP19.19■□□□□ 0.66
CAPN1-213ENST00000527897 LDHBP07195 334 aaKnown RBP19.19■□□□□ 0.66
CAPN1-213ENST00000527897 PRDX5P30044 214 aa19.19■□□□□ 0.66
CAPN1-213ENST00000527897 TNNI2P48788 182 aa19.19■□□□□ 0.66
CAPN1-213ENST00000527897 ATP8B2P98198 1209 aa19.19■□□□□ 0.66
CAPN1-213ENST00000527897 MVPQ14764 893 aaKnown RBP19.19■□□□□ 0.66
CAPN1-213ENST00000527897 TMOD2Q9NZR1 351 aa19.19■□□□□ 0.66
CAPN1-213ENST00000527897 AKAP11Q9UKA4 1901 aa19.18■□□□□ 0.66
CAPN1-213ENST00000527897 SEMA3EO15041 775 aa19.18■□□□□ 0.66
CAPN1-213ENST00000527897 CA12O43570 354 aa19.18■□□□□ 0.66
CAPN1-213ENST00000527897 SURF6O75683 361 aaKnown RBP19.18■□□□□ 0.66
CAPN1-213ENST00000527897 CAPN15O75808 1086 aa19.18■□□□□ 0.66
CAPN1-213ENST00000527897 MS4A1P11836 297 aa19.18■□□□□ 0.66
CAPN1-213ENST00000527897 RASGRF1Q13972 1273 aa19.18■□□□□ 0.66
CAPN1-213ENST00000527897 DIXDC1Q155Q3 683 aa19.18■□□□□ 0.66
CAPN1-213ENST00000527897 ZDHHC15Q96MV8 337 aa19.18■□□□□ 0.66
CAPN1-213ENST00000527897 TMEM39BQ9GZU3 492 aa19.18■□□□□ 0.66
CAPN1-213ENST00000527897 ABCF2Q9UG63 623 aa19.18■□□□□ 0.66
CAPN1-213ENST00000527897 SSC5DA1L4H1 1573 aa19.18■□□□□ 0.66
CAPN1-213ENST00000527897 POLA2Q14181 598 aa19.17■□□□□ 0.66
CAPN1-213ENST00000527897 SSH3Q8TE77 659 aa19.17■□□□□ 0.66
CAPN1-213ENST00000527897 CSRNP1Q96S65 589 aa19.17■□□□□ 0.66
CAPN1-213ENST00000527897 TRPA1O75762 1119 aa19.16■□□□□ 0.66
CAPN1-213ENST00000527897 APOBEC3HQ6NTF7 200 aaKnown RBP19.16■□□□□ 0.66
CAPN1-213ENST00000527897 HHIPL2Q6UWX4 724 aa19.16■□□□□ 0.66
CAPN1-213ENST00000527897 CDAN1Q8IWY9 1227 aa19.16■□□□□ 0.66
CAPN1-213ENST00000527897 SLC10A4Q96EP9 437 aa19.16■□□□□ 0.66
CAPN1-213ENST00000527897 COG6Q9Y2V7 657 aa19.16■□□□□ 0.66
CAPN1-213ENST00000527897 IREB2P48200 963 aaKnown RBP19.15■□□□□ 0.66
CAPN1-213ENST00000527897 LDLRAD1Q5T700 205 aa19.15■□□□□ 0.66
CAPN1-213ENST00000527897 DZIP1Q86YF9 867 aaKnown RBP19.15■□□□□ 0.66
CAPN1-213ENST00000527897 ZGPATQ8N5A5 531 aaKnown RBP19.15■□□□□ 0.66
CAPN1-213ENST00000527897 CLMNQ96JQ2 1002 aa19.15■□□□□ 0.66
CAPN1-213ENST00000527897 MRIQ9BWK5 157 aa19.15■□□□□ 0.66
CAPN1-213ENST00000527897 CASP8AP2Q9UKL3 1982 aa19.15■□□□□ 0.66
CAPN1-213ENST00000527897 CEP85Q6P2H3 762 aa19.14■□□□□ 0.65
CAPN1-213ENST00000527897 RNF186Q9NXI6 227 aa19.14■□□□□ 0.65
CAPN1-213ENST00000527897 DAGLAQ9Y4D2 1042 aa19.14■□□□□ 0.65
CAPN1-213ENST00000527897 SALL1Q9NSC2 1324 aa19.14■□□□□ 0.65
CAPN1-213ENST00000527897 AK9Q5TCS8 1911 aa19.13■□□□□ 0.65
CAPN1-213ENST00000527897 MYH2Q9UKX2 1941 aa19.13■□□□□ 0.65
CAPN1-213ENST00000527897 USP2O75604 605 aaPredicted RBP19.13■□□□□ 0.65
CAPN1-213ENST00000527897 PI16Q6UXB8 463 aa19.13■□□□□ 0.65
CAPN1-213ENST00000527897 TEPSINQ96N21 525 aa19.13■□□□□ 0.65
CAPN1-213ENST00000527897 MAP3K11Q16584 847 aa19.12■□□□□ 0.65
CAPN1-213ENST00000527897 TNNI3KQ59H18 835 aa19.12■□□□□ 0.65
CAPN1-213ENST00000527897 REM2Q8IYK8 340 aaPredicted RBP19.12■□□□□ 0.65
CAPN1-213ENST00000527897 USP40Q9NVE5 1235 aa19.12■□□□□ 0.65
CAPN1-213ENST00000527897 FPGT-TNNI3KV9GXZ4 949 aa19.12■□□□□ 0.65
CAPN1-213ENST00000527897 TCP10Q12799 353 aa19.11■□□□□ 0.65
CAPN1-213ENST00000527897 TTC39AQ5SRH9 613 aa19.11■□□□□ 0.65
CAPN1-213ENST00000527897 SPRYD7Q5W111 196 aa19.11■□□□□ 0.65
CAPN1-213ENST00000527897 SPTY2D1Q68D10 685 aaPredicted RBP19.11■□□□□ 0.65
CAPN1-213ENST00000527897 CDC42EP5Q6NZY7 148 aa19.11■□□□□ 0.65
CAPN1-213ENST00000527897 ERICH6Q7L0X2 663 aa19.11■□□□□ 0.65
CAPN1-213ENST00000527897 ANKRD13AQ8IZ07 590 aa19.11■□□□□ 0.65
CAPN1-213ENST00000527897 SPATA5Q8NB90 893 aa19.11■□□□□ 0.65
CAPN1-213ENST00000527897 BCL11AQ9H165 835 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms