RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 H0YIN7 160 aa7.56□□□□□ -1.2
LINC01001-202ENST00000527683 APBB1O00213 710 aa7.56□□□□□ -1.2
LINC01001-202ENST00000527683 NFKBIEO00221 500 aa7.56□□□□□ -1.2
LINC01001-202ENST00000527683 PIK3CDO00329 1044 aa7.56□□□□□ -1.2
LINC01001-202ENST00000527683 GMPRP36959 345 aa7.56□□□□□ -1.2
LINC01001-202ENST00000527683 EIF5P55010 431 aaKnown RBP7.56□□□□□ -1.2
LINC01001-202ENST00000527683 MCCD1P59942 119 aaPredicted RBP7.56□□□□□ -1.2
LINC01001-202ENST00000527683 PTSQ03393 145 aa7.56□□□□□ -1.2
LINC01001-202ENST00000527683 MTHFSDQ2M296 383 aaKnown RBP7.56□□□□□ -1.2
LINC01001-202ENST00000527683 CC2D2BQ6DHV5 1058 aa7.56□□□□□ -1.2
LINC01001-202ENST00000527683 TNS4Q8IZW8 715 aa7.56□□□□□ -1.2
LINC01001-202ENST00000527683 GPR161Q8N6U8 529 aaKnown RBP7.56□□□□□ -1.2
LINC01001-202ENST00000527683 ADAMTS19Q8TE59 1207 aa7.56□□□□□ -1.2
LINC01001-202ENST00000527683 KCPQ6ZWJ8 1503 aa7.56□□□□□ -1.2
LINC01001-202ENST00000527683 UBR3Q6ZT12 1888 aa7.55□□□□□ -1.2
LINC01001-202ENST00000527683 A0A1W2PRU2 124 aa7.55□□□□□ -1.2
LINC01001-202ENST00000527683 WIPF1O43516 503 aa7.55□□□□□ -1.2
LINC01001-202ENST00000527683 CANXP27824 592 aaKnown RBP7.55□□□□□ -1.2
LINC01001-202ENST00000527683 BICDL1Q6ZP65 573 aa7.55□□□□□ -1.2
LINC01001-202ENST00000527683 TAF1LQ8IZX4 1826 aa7.55□□□□□ -1.2
LINC01001-202ENST00000527683 SLC35F4A4IF30 521 aa7.54□□□□□ -1.2
LINC01001-202ENST00000527683 ATP5J2-PTCD1G3V325 749 aa7.54□□□□□ -1.2
LINC01001-202ENST00000527683 STARD3NLO95772 234 aa7.54□□□□□ -1.2
LINC01001-202ENST00000527683 HMOX1P09601 288 aa7.54□□□□□ -1.2
LINC01001-202ENST00000527683 HSPA1AP0DMV8 641 aaKnown RBP7.54□□□□□ -1.2
LINC01001-202ENST00000527683 HSPA1BP0DMV9 641 aaKnown RBP7.54□□□□□ -1.2
LINC01001-202ENST00000527683 TBC1D9BQ66K14 1250 aa7.54□□□□□ -1.2
LINC01001-202ENST00000527683 NPAS3Q8IXF0 933 aa7.54□□□□□ -1.2
LINC01001-202ENST00000527683 IL17REQ8NFR9 667 aa7.54□□□□□ -1.2
LINC01001-202ENST00000527683 ZNF622Q969S3 477 aaKnown RBP eCLIP7.54□□□□□ -1.2
LINC01001-202ENST00000527683 BRIP1Q9BX63 1249 aa7.54□□□□□ -1.2
LINC01001-202ENST00000527683 ALG2Q9H553 416 aa7.54□□□□□ -1.2
LINC01001-202ENST00000527683 POLMQ9NP87 494 aaPredicted RBP7.54□□□□□ -1.2
LINC01001-202ENST00000527683 ADAMTS8Q9UP79 889 aa7.54□□□□□ -1.2
LINC01001-202ENST00000527683 COL3A1P02461 1466 aaPredicted RBP7.54□□□□□ -1.2
LINC01001-202ENST00000527683 PKD1L3Q7Z443 1732 aa7.53□□□□□ -1.2
LINC01001-202ENST00000527683 A0A087WZG4 1122 aa7.53□□□□□ -1.2
LINC01001-202ENST00000527683 C21orf2O43822 256 aa7.53□□□□□ -1.2
LINC01001-202ENST00000527683 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.53□□□□□ -1.2
LINC01001-202ENST00000527683 RNF20Q5VTR2 975 aa7.53□□□□□ -1.2
LINC01001-202ENST00000527683 CLUAP1Q96AJ1 413 aa7.53□□□□□ -1.2
LINC01001-202ENST00000527683 ZNF496Q96IT1 587 aaPredicted RBP7.53□□□□□ -1.2
LINC01001-202ENST00000527683 RAB6BQ9NRW1 208 aa7.53□□□□□ -1.2
LINC01001-202ENST00000527683 CUEDC1Q9NWM3 386 aaPredicted RBP7.53□□□□□ -1.2
LINC01001-202ENST00000527683 HRH3Q9Y5N1 445 aa7.53□□□□□ -1.2
LINC01001-202ENST00000527683 RNF123Q5XPI4 1314 aa7.52□□□□□ -1.2
LINC01001-202ENST00000527683 ITGB4P16144 1822 aa7.52□□□□□ -1.2
LINC01001-202ENST00000527683 DDNO94850 711 aaPredicted RBP7.52□□□□□ -1.21
LINC01001-202ENST00000527683 A1BGP04217 495 aa7.52□□□□□ -1.21
LINC01001-202ENST00000527683 VSIG8P0DPA2 414 aa7.52□□□□□ -1.21
LINC01001-202ENST00000527683 PDE6BP35913 854 aa7.52□□□□□ -1.21
LINC01001-202ENST00000527683 RNF144AP50876 292 aaPredicted RBP7.52□□□□□ -1.21
LINC01001-202ENST00000527683 PRR5LQ6MZQ0 368 aa7.52□□□□□ -1.21
LINC01001-202ENST00000527683 C7orf43Q8WVR3 580 aa7.52□□□□□ -1.21
LINC01001-202ENST00000527683 TEX13AQ9BXU3 409 aaPredicted RBP7.52□□□□□ -1.21
LINC01001-202ENST00000527683 ZNF330Q9Y3S2 320 aaPredicted RBP7.52□□□□□ -1.21
LINC01001-202ENST00000527683 COL15A1P39059 1388 aa7.51□□□□□ -1.21
LINC01001-202ENST00000527683 KCNQ3O43525 872 aa7.51□□□□□ -1.21
LINC01001-202ENST00000527683 DIAPH1O60610 1272 aaKnown RBP7.51□□□□□ -1.21
LINC01001-202ENST00000527683 CAMTA2O94983 1202 aa7.51□□□□□ -1.21
LINC01001-202ENST00000527683 IL2RAP01589 272 aa7.51□□□□□ -1.21
LINC01001-202ENST00000527683 KRT76Q01546 638 aa7.51□□□□□ -1.21
LINC01001-202ENST00000527683 WASHC4Q2M389 1173 aa7.51□□□□□ -1.21
LINC01001-202ENST00000527683 ZNF790Q6PG37 636 aa7.51□□□□□ -1.21
LINC01001-202ENST00000527683 PRICKLE2Q7Z3G6 844 aa7.51□□□□□ -1.21
LINC01001-202ENST00000527683 CCDC155Q8N6L0 562 aa7.51□□□□□ -1.21
LINC01001-202ENST00000527683 ARHGEF10LQ9HCE6 1279 aa7.51□□□□□ -1.21
LINC01001-202ENST00000527683 C4AP0C0L4 1744 aa7.51□□□□□ -1.21
LINC01001-202ENST00000527683 ZNF521Q96K83 1311 aa7.51□□□□□ -1.21
LINC01001-202ENST00000527683 KIAA1551Q9HCM1 1747 aa7.5□□□□□ -1.21
LINC01001-202ENST00000527683 CARMIL3Q8ND23 1372 aa7.5□□□□□ -1.21
LINC01001-202ENST00000527683 MYH14Q7Z406 1995 aaKnown RBP7.5□□□□□ -1.21
LINC01001-202ENST00000527683 MEN1O00255 615 aa7.5□□□□□ -1.21
LINC01001-202ENST00000527683 SRGNP10124 158 aa7.5□□□□□ -1.21
LINC01001-202ENST00000527683 RHOQP17081 205 aa7.5□□□□□ -1.21
LINC01001-202ENST00000527683 IL6STP40189 918 aaPredicted RBP7.5□□□□□ -1.21
LINC01001-202ENST00000527683 STYK1Q6J9G0 422 aa7.5□□□□□ -1.21
LINC01001-202ENST00000527683 TTC5Q8N0Z6 440 aa7.5□□□□□ -1.21
LINC01001-202ENST00000527683 CNKSR1Q969H4 720 aa7.5□□□□□ -1.21
LINC01001-202ENST00000527683 SETDB2Q96T68 719 aa7.5□□□□□ -1.21
LINC01001-202ENST00000527683 GRIP2Q9C0E4 1043 aa7.5□□□□□ -1.21
LINC01001-202ENST00000527683 PNNQ9H307 717 aaKnown RBP7.5□□□□□ -1.21
LINC01001-202ENST00000527683 MKRN1Q9UHC7 482 aaKnown RBP7.5□□□□□ -1.21
LINC01001-202ENST00000527683 USP16Q9Y5T5 823 aa7.5□□□□□ -1.21
LINC01001-202ENST00000527683 KIF13BQ9NQT8 1826 aa7.5□□□□□ -1.21
LINC01001-202ENST00000527683 LTBP3Q9NS15 1303 aa7.5□□□□□ -1.21
LINC01001-202ENST00000527683 N4BP2Q86UW6 1770 aaPredicted RBP7.49□□□□□ -1.21
LINC01001-202ENST00000527683 KLRG2A4D1S0 409 aaPredicted RBP7.49□□□□□ -1.21
LINC01001-202ENST00000527683 GNAT3A8MTJ3 354 aa7.49□□□□□ -1.21
LINC01001-202ENST00000527683 FLIIQ13045 1269 aa7.49□□□□□ -1.21
LINC01001-202ENST00000527683 CLN3Q13286 438 aa7.49□□□□□ -1.21
LINC01001-202ENST00000527683 RNF135Q8IUD6 432 aa7.49□□□□□ -1.21
LINC01001-202ENST00000527683 RUNDC1Q96C34 613 aa7.49□□□□□ -1.21
LINC01001-202ENST00000527683 MASTLQ96GX5 879 aa7.49□□□□□ -1.21
LINC01001-202ENST00000527683 PHACTR3Q96KR7 559 aa7.49□□□□□ -1.21
LINC01001-202ENST00000527683 TAOK3Q9H2K8 898 aa7.49□□□□□ -1.21
LINC01001-202ENST00000527683 PRM3Q9NNZ6 103 aa7.49□□□□□ -1.21
LINC01001-202ENST00000527683 PASKQ96RG2 1323 aa7.49□□□□□ -1.21
LINC01001-202ENST00000527683 HEG1Q9ULI3 1381 aa7.48□□□□□ -1.21
LINC01001-202ENST00000527683 FOXN1O15353 648 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms