RNA–Protein interactions for RNA: ENST00000527649.1

SORL1-205, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 1,765 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-205ENST00000527649 RAD50Q92878 1312 aa16.31■□□□□ 0.2
SORL1-205ENST00000527649 LDHBP07195 334 aaKnown RBP16.3■□□□□ 0.2
SORL1-205ENST00000527649 PRKCSHP14314 528 aaPredicted RBP16.3■□□□□ 0.2
SORL1-205ENST00000527649 YBX3P16989 372 aaKnown RBP eCLIP16.3■□□□□ 0.27e-12■■□□□ 13
SORL1-205ENST00000527649 PTH1RQ03431 593 aa16.3■□□□□ 0.2
SORL1-205ENST00000527649 ZGPATQ8N5A5 531 aaKnown RBP16.3■□□□□ 0.2
SORL1-205ENST00000527649 CCDC171Q6TFL3 1326 aa16.29■□□□□ 0.2
SORL1-205ENST00000527649 CYP7A1P22680 504 aa16.29■□□□□ 0.2
SORL1-205ENST00000527649 VPS53Q5VIR6 699 aa16.29■□□□□ 0.2
SORL1-205ENST00000527649 MIGA1Q8NAN2 632 aa16.29■□□□□ 0.2
SORL1-205ENST00000527649 VPS33BQ9H267 617 aa16.29■□□□□ 0.2
SORL1-205ENST00000527649 UPF2Q9HAU5 1272 aaKnown RBP16.29■□□□□ 0.2
SORL1-205ENST00000527649 ZNF646O15015 1829 aaPredicted RBP16.29■□□□□ 0.2
SORL1-205ENST00000527649 LTBP3Q9NS15 1303 aa16.28■□□□□ 0.2
SORL1-205ENST00000527649 DIXDC1Q155Q3 683 aa16.28■□□□□ 0.2
SORL1-205ENST00000527649 SPTY2D1Q68D10 685 aaPredicted RBP16.28■□□□□ 0.2
SORL1-205ENST00000527649 NAA16Q6N069 864 aaPredicted RBP16.28■□□□□ 0.2
SORL1-205ENST00000527649 TBC1D22AQ8WUA7 517 aa16.28■□□□□ 0.2
SORL1-205ENST00000527649 TBC1D32Q96NH3 1257 aa16.28■□□□□ 0.2
SORL1-205ENST00000527649 C22orf23Q9BZE7 217 aa16.28■□□□□ 0.2
SORL1-205ENST00000527649 MAST2Q6P0Q8 1798 aa16.28■□□□□ 0.2
SORL1-205ENST00000527649 USP17L3A6NCW0 530 aa16.28■□□□□ 0.2
SORL1-205ENST00000527649 USP17L4A6NCW7 530 aa16.28■□□□□ 0.2
SORL1-205ENST00000527649 GPAA1O43292 621 aa16.28■□□□□ 0.2
SORL1-205ENST00000527649 DACT2Q5SW24 774 aa16.28■□□□□ 0.2
SORL1-205ENST00000527649 STRIP1Q5VSL9 837 aa16.28■□□□□ 0.2
SORL1-205ENST00000527649 KIAA1211Q6ZU35 1233 aa16.28■□□□□ 0.2
SORL1-205ENST00000527649 USP17L1Q7RTZ2 530 aa16.28■□□□□ 0.2
SORL1-205ENST00000527649 DZIP1Q86YF9 867 aaKnown RBP16.28■□□□□ 0.2
SORL1-205ENST00000527649 RBM19Q9Y4C8 960 aaKnown RBP16.28■□□□□ 0.2
SORL1-205ENST00000527649 CCDC88AQ3V6T2 1871 aa16.28■□□□□ 0.2
SORL1-205ENST00000527649 FOXP2O15409 715 aa16.27■□□□□ 0.2
SORL1-205ENST00000527649 RAD17O75943 681 aa16.27■□□□□ 0.2
SORL1-205ENST00000527649 ARHGAP27Q6ZUM4 889 aa16.27■□□□□ 0.2
SORL1-205ENST00000527649 NIM1KQ8IY84 436 aa16.27■□□□□ 0.2
SORL1-205ENST00000527649 F8W031 263 aaPredicted RBP16.26■□□□□ 0.19
SORL1-205ENST00000527649 MBD4O95243 580 aa16.26■□□□□ 0.19
SORL1-205ENST00000527649 ARMT1Q9H993 441 aa16.26■□□□□ 0.19
SORL1-205ENST00000527649 EIF5BO60841 1220 aaKnown RBP16.26■□□□□ 0.19
SORL1-205ENST00000527649 LCORLQ8N3X6 602 aa16.26■□□□□ 0.19
SORL1-205ENST00000527649 AIDAQ96BJ3 306 aa16.26■□□□□ 0.19
SORL1-205ENST00000527649 ZNRF3Q9ULT6 936 aa16.26■□□□□ 0.19
SORL1-205ENST00000527649 PSMD14O00487 310 aa16.25■□□□□ 0.19
SORL1-205ENST00000527649 DYNLL1P63167 89 aaKnown RBP16.25■□□□□ 0.19
SORL1-205ENST00000527649 JDP2Q8WYK2 163 aa16.25■□□□□ 0.19
SORL1-205ENST00000527649 MAP4K1Q92918 833 aa16.25■□□□□ 0.19
SORL1-205ENST00000527649 STRBPQ96SI9 672 aaKnown RBP16.25■□□□□ 0.19
SORL1-205ENST00000527649 RIOK1Q9BRS2 568 aaKnown RBP16.25■□□□□ 0.19
SORL1-205ENST00000527649 PSME4Q14997 1843 aa16.24■□□□□ 0.19
SORL1-205ENST00000527649 MYH2Q9UKX2 1941 aa16.24■□□□□ 0.19
SORL1-205ENST00000527649 HSPD1P10809 573 aaKnown RBP16.24■□□□□ 0.19
SORL1-205ENST00000527649 RBM25P49756 843 aaKnown RBP16.24■□□□□ 0.19
SORL1-205ENST00000527649 KIAA0825Q8IV33 1275 aa16.24■□□□□ 0.19
SORL1-205ENST00000527649 AATFQ9NY61 560 aaKnown RBP eCLIP16.24■□□□□ 0.19
SORL1-205ENST00000527649 PALD1Q9ULE6 856 aa16.24■□□□□ 0.19
SORL1-205ENST00000527649 TTF2Q9UNY4 1162 aaKnown RBP16.24■□□□□ 0.19
SORL1-205ENST00000527649 MAGEB6P1A0A0J9YX57 407 aa16.23■□□□□ 0.19
SORL1-205ENST00000527649 PRKAB2O43741 272 aa16.23■□□□□ 0.19
SORL1-205ENST00000527649 SCNN1DP51172 638 aa16.23■□□□□ 0.19
SORL1-205ENST00000527649 SUGT1Q9Y2Z0 365 aa16.23■□□□□ 0.19
SORL1-205ENST00000527649 RBM8AQ9Y5S9 174 aaKnown RBP16.23■□□□□ 0.19
SORL1-205ENST00000527649 FKBP1AP62942 108 aaKnown RBP16.23■□□□□ 0.19
SORL1-205ENST00000527649 CXCL9Q07325 125 aa16.23■□□□□ 0.19
SORL1-205ENST00000527649 KIF2CQ99661 725 aa16.23■□□□□ 0.19
SORL1-205ENST00000527649 MROH7-TTC4A0A0A0MT08 1334 aa16.22■□□□□ 0.19
SORL1-205ENST00000527649 ADAMTSL1Q8N6G6 1762 aa16.22■□□□□ 0.19
SORL1-205ENST00000527649 VIL1P09327 827 aaKnown RBP16.22■□□□□ 0.19
SORL1-205ENST00000527649 HSPA4P34932 840 aa16.22■□□□□ 0.19
SORL1-205ENST00000527649 GSTO1P78417 241 aa16.22■□□□□ 0.19
SORL1-205ENST00000527649 RSBN1LQ6PCB5 846 aaPredicted RBP16.22■□□□□ 0.19
SORL1-205ENST00000527649 DSCC1Q9BVC3 393 aa16.22■□□□□ 0.19
SORL1-205ENST00000527649 ZBTB12Q9Y330 459 aaPredicted RBP16.22■□□□□ 0.19
SORL1-205ENST00000527649 EPB41L2O43491 1005 aaKnown RBP16.21■□□□□ 0.19
SORL1-205ENST00000527649 IGSF3O75054 1194 aa16.21■□□□□ 0.19
SORL1-205ENST00000527649 LMNB1P20700 586 aa16.21■□□□□ 0.19
SORL1-205ENST00000527649 NECTIN1Q15223 517 aa16.21■□□□□ 0.19
SORL1-205ENST00000527649 TMED8Q6PL24 325 aaPredicted RBP16.21■□□□□ 0.19
SORL1-205ENST00000527649 GAKO14976 1311 aa16.21■□□□□ 0.19
SORL1-205ENST00000527649 SBF1O95248 1867 aa16.21■□□□□ 0.18
SORL1-205ENST00000527649 RASEFQ8IZ41 740 aa16.21■□□□□ 0.18
SORL1-205ENST00000527649 SDR42E1Q8WUS8 393 aa16.21■□□□□ 0.18
SORL1-205ENST00000527649 EPB41L4AQ9HCS5 686 aaPredicted RBP16.21■□□□□ 0.18
SORL1-205ENST00000527649 DAGLAQ9Y4D2 1042 aa16.21■□□□□ 0.18
SORL1-205ENST00000527649 PCDHAC2Q9Y5I4 1007 aa16.21■□□□□ 0.18
SORL1-205ENST00000527649 TAF6LQ9Y6J9 622 aa16.21■□□□□ 0.18
SORL1-205ENST00000527649 SLC4A4Q9Y6R1 1079 aa16.21■□□□□ 0.18
SORL1-205ENST00000527649 GSG1L2A8MUP6 293 aa16.2■□□□□ 0.18
SORL1-205ENST00000527649 FZD9O00144 591 aa16.2■□□□□ 0.18
SORL1-205ENST00000527649 FGAP02671 866 aa16.2■□□□□ 0.18
SORL1-205ENST00000527649 APPP05067 770 aa16.2■□□□□ 0.18
SORL1-205ENST00000527649 BTDP43251 543 aa16.2■□□□□ 0.18
SORL1-205ENST00000527649 CIAPIN1Q6FI81 312 aa16.2■□□□□ 0.18
SORL1-205ENST00000527649 GMLQ99445 158 aa16.2■□□□□ 0.18
SORL1-205ENST00000527649 GPR75-ASB3A0A0A6YYF3 556 aa16.19■□□□□ 0.18
SORL1-205ENST00000527649 SLC27A2O14975 620 aa16.19■□□□□ 0.18
SORL1-205ENST00000527649 LDHCP07864 332 aa16.19■□□□□ 0.18
SORL1-205ENST00000527649 GPR162Q16538 588 aa16.19■□□□□ 0.18
SORL1-205ENST00000527649 CREB3L3Q68CJ9 461 aa16.19■□□□□ 0.18
SORL1-205ENST00000527649 SH3RF3Q8TEJ3 882 aaPredicted RBP16.19■□□□□ 0.18
SORL1-205ENST00000527649 FAM163AQ96GL9 167 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms