RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 WBP1LQ9NX94 342 aa32.58■■■□□ 2.81
TSPAN4-217ENST00000527644 PPP2R3BQ9Y5P8 575 aa32.58■■■□□ 2.81
TSPAN4-217ENST00000527644 MYH13Q9UKX3 1938 aa32.57■■■□□ 2.81
TSPAN4-217ENST00000527644 TEKT1Q969V4 418 aa32.57■■■□□ 2.8
TSPAN4-217ENST00000527644 VEZTQ9HBM0 779 aa32.57■■■□□ 2.8
TSPAN4-217ENST00000527644 DDX19BQ9UMR2 479 aa32.57■■■□□ 2.8
TSPAN4-217ENST00000527644 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP32.57■■■□□ 2.8
TSPAN4-217ENST00000527644 AOX1Q06278 1338 aa32.56■■■□□ 2.8
TSPAN4-217ENST00000527644 THSD7BQ9C0I4 1608 aa32.56■■■□□ 2.8
TSPAN4-217ENST00000527644 NEUROD6Q96NK8 337 aa32.56■■■□□ 2.8
TSPAN4-217ENST00000527644 PAPPA2Q9BXP8 1791 aa32.55■■■□□ 2.8
TSPAN4-217ENST00000527644 AOC2O75106 756 aa32.55■■■□□ 2.8
TSPAN4-217ENST00000527644 SURF6O75683 361 aaKnown RBP32.55■■■□□ 2.8
TSPAN4-217ENST00000527644 SPDYE2Q495Y8 402 aa32.55■■■□□ 2.8
TSPAN4-217ENST00000527644 CEP85Q6P2H3 762 aa32.55■■■□□ 2.8
TSPAN4-217ENST00000527644 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.55■■■□□ 2.8
TSPAN4-217ENST00000527644 CCDC102AQ96A19 550 aa32.55■■■□□ 2.8
TSPAN4-217ENST00000527644 AIDAQ96BJ3 306 aa32.55■■■□□ 2.8
TSPAN4-217ENST00000527644 ZNF70Q9UC06 446 aaPredicted RBP32.55■■■□□ 2.8
TSPAN4-217ENST00000527644 COG6Q9Y2V7 657 aa32.55■■■□□ 2.8
TSPAN4-217ENST00000527644 NOP58Q9Y2X3 529 aaKnown RBP32.55■■■□□ 2.8
TSPAN4-217ENST00000527644 ZNF157P51786 506 aaPredicted RBP32.54■■■□□ 2.8
TSPAN4-217ENST00000527644 OS9Q13438 667 aaPredicted RBP32.54■■■□□ 2.8
TSPAN4-217ENST00000527644 TDRD3Q9H7E2 651 aaKnown RBP32.54■■■□□ 2.8
TSPAN4-217ENST00000527644 SALL1Q9NSC2 1324 aa32.53■■■□□ 2.8
TSPAN4-217ENST00000527644 NOGQ13253 232 aa32.53■■■□□ 2.8
TSPAN4-217ENST00000527644 ZDHHC15Q96MV8 337 aa32.53■■■□□ 2.8
TSPAN4-217ENST00000527644 CHMP4BQ9H444 224 aaKnown RBP32.53■■■□□ 2.8
TSPAN4-217ENST00000527644 TNFAIP1Q13829 316 aa32.52■■■□□ 2.8
TSPAN4-217ENST00000527644 TTLL12Q14166 644 aaPredicted RBP32.52■■■□□ 2.8
TSPAN4-217ENST00000527644 HHIPL2Q6UWX4 724 aa32.52■■■□□ 2.8
TSPAN4-217ENST00000527644 GPR108Q9NPR9 543 aa32.52■■■□□ 2.8
TSPAN4-217ENST00000527644 PDS5AQ29RF7 1337 aaKnown RBP32.51■■■□□ 2.8
TSPAN4-217ENST00000527644 PDE3AQ14432 1141 aa32.51■■■□□ 2.79
TSPAN4-217ENST00000527644 GORABQ5T7V8 394 aa32.51■■■□□ 2.79
TSPAN4-217ENST00000527644 MOB2Q70IA6 237 aa32.51■■■□□ 2.79
TSPAN4-217ENST00000527644 FAM155AB1AL88 458 aaPredicted RBP32.5■■■□□ 2.79
TSPAN4-217ENST00000527644 RASGRF1Q13972 1273 aa32.5■■■□□ 2.79
TSPAN4-217ENST00000527644 IFFO2Q5TF58 517 aa32.5■■■□□ 2.79
TSPAN4-217ENST00000527644 ZGPATQ8N5A5 531 aaKnown RBP32.5■■■□□ 2.79
TSPAN4-217ENST00000527644 UBE2Q2LH0YL09 131 aa32.49■■■□□ 2.79
TSPAN4-217ENST00000527644 FOXN1O15353 648 aa32.49■■■□□ 2.79
TSPAN4-217ENST00000527644 LDHBP07195 334 aaKnown RBP32.49■■■□□ 2.79
TSPAN4-217ENST00000527644 RASA3Q14644 834 aa32.49■■■□□ 2.79
TSPAN4-217ENST00000527644 SUPT20HL1Q3ZLR7 823 aa32.49■■■□□ 2.79
TSPAN4-217ENST00000527644 ARMC9Q7Z3E5 817 aa32.49■■■□□ 2.79
TSPAN4-217ENST00000527644 ZBTB40Q9NUA8 1239 aa32.49■■■□□ 2.79
TSPAN4-217ENST00000527644 PRDX5P30044 214 aa32.48■■■□□ 2.79
TSPAN4-217ENST00000527644 APOBEC3HQ6NTF7 200 aaKnown RBP32.48■■■□□ 2.79
TSPAN4-217ENST00000527644 BEGAINQ9BUH8 593 aa32.48■■■□□ 2.79
TSPAN4-217ENST00000527644 SLC10A3P09131 477 aa32.47■■■□□ 2.79
TSPAN4-217ENST00000527644 TNNI3KQ59H18 835 aa32.47■■■□□ 2.79
TSPAN4-217ENST00000527644 RPAP2Q8IXW5 612 aaPredicted RBP32.47■■■□□ 2.79
TSPAN4-217ENST00000527644 FPGT-TNNI3KV9GXZ4 949 aa32.47■■■□□ 2.79
TSPAN4-217ENST00000527644 TNNI2P48788 182 aa32.46■■■□□ 2.79
TSPAN4-217ENST00000527644 CTCFP49711 727 aaPredicted RBP32.46■■■□□ 2.79
TSPAN4-217ENST00000527644 PRKG1Q13976 671 aa32.45■■■□□ 2.79
TSPAN4-217ENST00000527644 TMOD2Q9NZR1 351 aa32.45■■■□□ 2.79
TSPAN4-217ENST00000527644 TCP10L2B9ZVM9 353 aa32.44■■■□□ 2.78
TSPAN4-217ENST00000527644 PPP1R12BO60237 982 aaPredicted RBP32.44■■■□□ 2.78
TSPAN4-217ENST00000527644 ARID4AP29374 1257 aaPredicted RBP32.44■■■□□ 2.78
TSPAN4-217ENST00000527644 NBPF12Q5TAG4 269 aaPredicted RBP32.44■■■□□ 2.78
TSPAN4-217ENST00000527644 C20orf194Q5TEA3 1177 aa32.44■■■□□ 2.78
TSPAN4-217ENST00000527644 RASAL3Q86YV0 1011 aa32.44■■■□□ 2.78
TSPAN4-217ENST00000527644 ZIC5Q96T25 663 aa32.44■■■□□ 2.78
TSPAN4-217ENST00000527644 ANGEL1Q9UNK9 670 aaKnown RBP32.44■■■□□ 2.78
TSPAN4-217ENST00000527644 UQCRFS1P1P0C7P4 283 aa32.43■■■□□ 2.78
TSPAN4-217ENST00000527644 SPTY2D1Q68D10 685 aaPredicted RBP32.43■■■□□ 2.78
TSPAN4-217ENST00000527644 HMG20BQ9P0W2 317 aa32.43■■■□□ 2.78
TSPAN4-217ENST00000527644 DIXDC1Q155Q3 683 aa32.42■■■□□ 2.78
TSPAN4-217ENST00000527644 MAP3K11Q16584 847 aa32.42■■■□□ 2.78
TSPAN4-217ENST00000527644 LDLRAD1Q5T700 205 aa32.42■■■□□ 2.78
TSPAN4-217ENST00000527644 FKBP1CQ5VVH2 108 aa32.42■■■□□ 2.78
TSPAN4-217ENST00000527644 ERC1Q8IUD2 1116 aa32.42■■■□□ 2.78
TSPAN4-217ENST00000527644 SPATA5Q8NB90 893 aa32.42■■■□□ 2.78
TSPAN4-217ENST00000527644 ABCF2Q9UG63 623 aa32.42■■■□□ 2.78
TSPAN4-217ENST00000527644 DAGLAQ9Y4D2 1042 aa32.42■■■□□ 2.78
TSPAN4-217ENST00000527644 SSC5DA1L4H1 1573 aa32.41■■■□□ 2.78
TSPAN4-217ENST00000527644 HMMRO75330 724 aa32.41■■■□□ 2.78
TSPAN4-217ENST00000527644 KIF23Q02241 960 aaPredicted RBP32.41■■■□□ 2.78
TSPAN4-217ENST00000527644 HSP90AB4PQ58FF6 505 aa32.41■■■□□ 2.78
TSPAN4-217ENST00000527644 YTHDC1Q96MU7 727 aaKnown RBP32.41■■■□□ 2.78
TSPAN4-217ENST00000527644 TEPSINQ96N21 525 aa32.41■■■□□ 2.78
TSPAN4-217ENST00000527644 CA12O43570 354 aa32.4■■■□□ 2.78
TSPAN4-217ENST00000527644 CCDC158Q5M9N0 1113 aa32.4■■■□□ 2.78
TSPAN4-217ENST00000527644 COL13A1Q5TAT6 717 aaPredicted RBP32.4■■■□□ 2.78
TSPAN4-217ENST00000527644 DBNDD2Q9BQY9 259 aa32.4■■■□□ 2.78
TSPAN4-217ENST00000527644 EXOC6BQ9Y2D4 811 aa32.4■■■□□ 2.78
TSPAN4-217ENST00000527644 CACNB3P54284 484 aa32.39■■■□□ 2.78
TSPAN4-217ENST00000527644 FAM83AQ86UY5 434 aa32.39■■■□□ 2.78
TSPAN4-217ENST00000527644 DZIP1Q86YF9 867 aaKnown RBP32.39■■■□□ 2.78
TSPAN4-217ENST00000527644 TMEM39BQ9GZU3 492 aa32.39■■■□□ 2.78
TSPAN4-217ENST00000527644 PRDM10Q9NQV6 1147 aa32.39■■■□□ 2.78
TSPAN4-217ENST00000527644 UNCXA6NJT0 531 aa32.38■■■□□ 2.77
TSPAN4-217ENST00000527644 TTC39AQ5SRH9 613 aa32.38■■■□□ 2.77
TSPAN4-217ENST00000527644 ERICH6Q7L0X2 663 aa32.38■■■□□ 2.77
TSPAN4-217ENST00000527644 SLF2Q8IX21 1173 aa32.38■■■□□ 2.77
TSPAN4-217ENST00000527644 REM2Q8IYK8 340 aaPredicted RBP32.38■■■□□ 2.77
TSPAN4-217ENST00000527644 FZD1Q9UP38 647 aa32.38■■■□□ 2.77
TSPAN4-217ENST00000527644 HSPA8P11142 646 aaKnown RBP32.37■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms