RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 STARD3NLO95772 234 aa14.53□□□□□ -0.08
CAPN1-208ENST00000527323 CYP19A1P11511 503 aaPredicted RBP14.53□□□□□ -0.08
CAPN1-208ENST00000527323 CRKLP46109 303 aaKnown RBP14.53□□□□□ -0.08
CAPN1-208ENST00000527323 GABPB1Q06547 395 aaPredicted RBP14.53□□□□□ -0.08
CAPN1-208ENST00000527323 ATL3Q6DD88 541 aa14.53□□□□□ -0.08
CAPN1-208ENST00000527323 NRDCO43847 1150 aa14.52□□□□□ -0.08
CAPN1-208ENST00000527323 IFNKQ9P0W0 207 aa14.52□□□□□ -0.08
CAPN1-208ENST00000527323 A0A0G2JLW4 131 aa14.52□□□□□ -0.08
CAPN1-208ENST00000527323 E7EWF7 191 aa14.52□□□□□ -0.08
CAPN1-208ENST00000527323 PDIA3P30101 505 aaKnown RBP14.52□□□□□ -0.08
CAPN1-208ENST00000527323 RFX5P48382 616 aaPredicted RBP14.52□□□□□ -0.08
CAPN1-208ENST00000527323 TIMM10P62072 90 aa14.52□□□□□ -0.08
CAPN1-208ENST00000527323 LMBR1LQ6UX01 489 aa14.52□□□□□ -0.08
CAPN1-208ENST00000527323 SHANK3Q9BYB0 1731 aa14.52□□□□□ -0.09
CAPN1-208ENST00000527323 BCL9O00512 1426 aa14.52□□□□□ -0.09
CAPN1-208ENST00000527323 TPM4P67936 248 aa14.52□□□□□ -0.09
CAPN1-208ENST00000527323 PAG1Q9NWQ8 432 aa14.52□□□□□ -0.09
CAPN1-208ENST00000527323 KIF2AO00139 706 aaPredicted RBP14.51□□□□□ -0.09
CAPN1-208ENST00000527323 NDUFA8P51970 172 aa14.51□□□□□ -0.09
CAPN1-208ENST00000527323 FBXO38Q6PIJ6 1188 aa14.51□□□□□ -0.09
CAPN1-208ENST00000527323 HOMER1Q86YM7 354 aa14.51□□□□□ -0.09
CAPN1-208ENST00000527323 SFPQP23246 707 aaKnown RBP eCLIP14.51□□□□□ -0.09
CAPN1-208ENST00000527323 EXOSC10Q01780 885 aaKnown RBP14.51□□□□□ -0.09
CAPN1-208ENST00000527323 DPCR1Q3MIW9 517 aa14.51□□□□□ -0.09
CAPN1-208ENST00000527323 ADALQ6DHV7 355 aa14.51□□□□□ -0.09
CAPN1-208ENST00000527323 ISM2Q6H9L7 571 aa14.51□□□□□ -0.09
CAPN1-208ENST00000527323 SYT10Q6XYQ8 523 aa14.51□□□□□ -0.09
CAPN1-208ENST00000527323 FMR1NBQ8N0W7 255 aaPredicted RBP14.51□□□□□ -0.09
CAPN1-208ENST00000527323 XPO4Q9C0E2 1151 aaKnown RBP14.51□□□□□ -0.09
CAPN1-208ENST00000527323 SRP68Q9UHB9 627 aaKnown RBP14.51□□□□□ -0.09
CAPN1-208ENST00000527323 PALLDQ8WX93 1383 aa14.51□□□□□ -0.09
CAPN1-208ENST00000527323 GORABQ5T7V8 394 aa14.5□□□□□ -0.09
CAPN1-208ENST00000527323 DZIP3Q86Y13 1208 aaKnown RBP14.5□□□□□ -0.09
CAPN1-208ENST00000527323 CHMP4CQ96CF2 233 aa14.5□□□□□ -0.09
CAPN1-208ENST00000527323 HELLSQ9NRZ9 838 aa14.5□□□□□ -0.09
CAPN1-208ENST00000527323 KIAA1468Q9P260 1216 aa14.5□□□□□ -0.09
CAPN1-208ENST00000527323 PKD1L3Q7Z443 1732 aa14.5□□□□□ -0.09
CAPN1-208ENST00000527323 SLC3A2P08195 630 aaKnown RBP14.5□□□□□ -0.09
CAPN1-208ENST00000527323 HSPD1P10809 573 aaKnown RBP14.5□□□□□ -0.09
CAPN1-208ENST00000527323 SYNE3Q6ZMZ3 975 aa14.5□□□□□ -0.09
CAPN1-208ENST00000527323 LINC00116Q8NCU8 138 aa14.5□□□□□ -0.09
CAPN1-208ENST00000527323 C8orf76Q96K31 380 aa14.5□□□□□ -0.09
CAPN1-208ENST00000527323 DSCC1Q9BVC3 393 aa14.5□□□□□ -0.09
CAPN1-208ENST00000527323 PARP4Q9UKK3 1724 aaKnown RBP14.5□□□□□ -0.09
CAPN1-208ENST00000527323 SNAP23O00161 211 aa14.5□□□□□ -0.09
CAPN1-208ENST00000527323 TTLL5Q6EMB2 1281 aa14.5□□□□□ -0.09
CAPN1-208ENST00000527323 RAB11FIP4Q86YS3 637 aa14.5□□□□□ -0.09
CAPN1-208ENST00000527323 IMPACTQ9P2X3 320 aa14.5□□□□□ -0.09
CAPN1-208ENST00000527323 CLIC4Q9Y696 253 aa14.5□□□□□ -0.09
CAPN1-208ENST00000527323 ILDR1Q86SU0 546 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-208ENST00000527323 NBPF11Q86T75 865 aa14.49□□□□□ -0.09
CAPN1-208ENST00000527323 SLC51AQ86UW1 340 aa14.49□□□□□ -0.09
CAPN1-208ENST00000527323 PLBD2Q8NHP8 589 aa14.49□□□□□ -0.09
CAPN1-208ENST00000527323 ZNF274Q96GC6 653 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-208ENST00000527323 GPHNQ9NQX3 736 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-208ENST00000527323 RTEL1Q9NZ71 1219 aa14.49□□□□□ -0.09
CAPN1-208ENST00000527323 SPATA31A6Q5VVP1 1343 aa14.49□□□□□ -0.09
CAPN1-208ENST00000527323 SLFN14P0C7P3 912 aa14.49□□□□□ -0.09
CAPN1-208ENST00000527323 HAND2P61296 217 aa14.49□□□□□ -0.09
CAPN1-208ENST00000527323 ERCC6LQ2NKX8 1250 aa14.49□□□□□ -0.09
CAPN1-208ENST00000527323 BARGINQ6ZT62 677 aa14.49□□□□□ -0.09
CAPN1-208ENST00000527323 SH3TC1Q8TE82 1336 aa14.49□□□□□ -0.09
CAPN1-208ENST00000527323 TNS2Q63HR2 1409 aa14.49□□□□□ -0.09
CAPN1-208ENST00000527323 SIPA1L3O60292 1781 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-208ENST00000527323 CPLX1O14810 134 aa14.48□□□□□ -0.09
CAPN1-208ENST00000527323 SPTLC2O15270 562 aa14.48□□□□□ -0.09
CAPN1-208ENST00000527323 IFIT1P09914 478 aaKnown RBP14.48□□□□□ -0.09
CAPN1-208ENST00000527323 E4F1Q66K89 784 aaPredicted RBP14.48□□□□□ -0.09
CAPN1-208ENST00000527323 KIF6Q6ZMV9 814 aa14.48□□□□□ -0.09
CAPN1-208ENST00000527323 LINC00301Q8NCQ3 95 aa14.48□□□□□ -0.09
CAPN1-208ENST00000527323 CCDC150Q8NCX0 1101 aa14.48□□□□□ -0.09
CAPN1-208ENST00000527323 OSBPL5Q9H0X9 879 aaPredicted RBP14.48□□□□□ -0.09
CAPN1-208ENST00000527323 TRPC5Q9UL62 973 aaPredicted RBP14.48□□□□□ -0.09
CAPN1-208ENST00000527323 THRAP3Q9Y2W1 955 aaKnown RBP14.48□□□□□ -0.09
CAPN1-208ENST00000527323 CARMIL3Q8ND23 1372 aa14.48□□□□□ -0.09
CAPN1-208ENST00000527323 LMOD1P29536 600 aaPredicted RBP14.48□□□□□ -0.09
CAPN1-208ENST00000527323 INTS5Q6P9B9 1019 aaKnown RBP14.48□□□□□ -0.09
CAPN1-208ENST00000527323 PUS3Q9BZE2 481 aaKnown RBP14.48□□□□□ -0.09
CAPN1-208ENST00000527323 ITGB4P16144 1822 aa14.48□□□□□ -0.09
CAPN1-208ENST00000527323 KCPQ6ZWJ8 1503 aa14.48□□□□□ -0.09
CAPN1-208ENST00000527323 FDPSP14324 419 aaKnown RBP14.47□□□□□ -0.09
CAPN1-208ENST00000527323 FKBP4Q02790 459 aaKnown RBP eCLIP14.47□□□□□ -0.09
CAPN1-208ENST00000527323 TERF2Q15554 542 aa14.47□□□□□ -0.09
CAPN1-208ENST00000527323 WASHC4Q2M389 1173 aa14.47□□□□□ -0.09
CAPN1-208ENST00000527323 KCNG4Q8TDN1 519 aa14.47□□□□□ -0.09
CAPN1-208ENST00000527323 PPP1R13BQ96KQ4 1090 aa14.47□□□□□ -0.09
CAPN1-208ENST00000527323 ORC3Q9UBD5 711 aaPredicted RBP14.47□□□□□ -0.09
CAPN1-208ENST00000527323 GNPATO15228 680 aa14.47□□□□□ -0.09
CAPN1-208ENST00000527323 ZNF202O95125 648 aa14.47□□□□□ -0.09
CAPN1-208ENST00000527323 RABL6Q3YEC7 729 aaPredicted RBP14.47□□□□□ -0.09
CAPN1-208ENST00000527323 ZMYM1Q5SVZ6 1142 aa14.47□□□□□ -0.09
CAPN1-208ENST00000527323 ARMCX5Q6P1M9 558 aa14.47□□□□□ -0.09
CAPN1-208ENST00000527323 A0A0U1RQG5 324 aaPredicted RBP14.47□□□□□ -0.09
CAPN1-208ENST00000527323 A0A1W2PQ27 194 aa14.47□□□□□ -0.09
CAPN1-208ENST00000527323 A0A1W2PQ64 194 aa14.47□□□□□ -0.09
CAPN1-208ENST00000527323 A0A1W2PQD8 194 aa14.47□□□□□ -0.09
CAPN1-208ENST00000527323 RNF113AO15541 343 aaKnown RBP14.47□□□□□ -0.09
CAPN1-208ENST00000527323 CCNL1Q9UK58 526 aaPredicted RBP14.47□□□□□ -0.09
CAPN1-208ENST00000527323 RFX7Q2KHR2 1363 aa14.46□□□□□ -0.09
CAPN1-208ENST00000527323 HELBQ8NG08 1087 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms