RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 FBXW7Q969H0 707 aa22.52■■□□□ 1.2
SMPD1-203ENST00000527275 VPS33BQ9H267 617 aa22.52■■□□□ 1.2
SMPD1-203ENST00000527275 GRIK5Q16478 980 aa22.51■■□□□ 1.19
SMPD1-203ENST00000527275 ZGPATQ8N5A5 531 aaKnown RBP22.51■■□□□ 1.19
SMPD1-203ENST00000527275 SCN9AQ15858 1988 aa22.51■■□□□ 1.19
SMPD1-203ENST00000527275 COL4A5P29400 1685 aa22.51■■□□□ 1.19
SMPD1-203ENST00000527275 ZNF532Q9HCE3 1301 aa22.51■■□□□ 1.19
SMPD1-203ENST00000527275 YDJCA8MPS7 323 aa22.5■■□□□ 1.19
SMPD1-203ENST00000527275 UBE3CQ15386 1083 aa22.5■■□□□ 1.19
SMPD1-203ENST00000527275 OSBP2Q969R2 916 aa22.5■■□□□ 1.19
SMPD1-203ENST00000527275 TCRBV5S4A2TA0A5A2 114 aa22.5■■□□□ 1.19
SMPD1-203ENST00000527275 ANAPC15P60006 121 aa22.5■■□□□ 1.19
SMPD1-203ENST00000527275 RASSF7Q02833 373 aa22.5■■□□□ 1.19
SMPD1-203ENST00000527275 MCMDC2Q4G0Z9 681 aa22.5■■□□□ 1.19
SMPD1-203ENST00000527275 ZNF589Q86UQ0 364 aaPredicted RBP22.5■■□□□ 1.19
SMPD1-203ENST00000527275 ZNF384Q8TF68 577 aa22.5■■□□□ 1.19
SMPD1-203ENST00000527275 KIAA1211Q6ZU35 1233 aa22.49■■□□□ 1.19
SMPD1-203ENST00000527275 TBC1D22AQ8WUA7 517 aa22.49■■□□□ 1.19
SMPD1-203ENST00000527275 APPBP2Q92624 585 aa22.49■■□□□ 1.19
SMPD1-203ENST00000527275 PUS7LQ9H0K6 701 aaKnown RBP22.49■■□□□ 1.19
SMPD1-203ENST00000527275 HELLSQ9NRZ9 838 aa22.49■■□□□ 1.19
SMPD1-203ENST00000527275 LTBP3Q9NS15 1303 aa22.49■■□□□ 1.19
SMPD1-203ENST00000527275 ST18O60284 1047 aa22.49■■□□□ 1.19
SMPD1-203ENST00000527275 LDHBP07195 334 aaKnown RBP22.49■■□□□ 1.19
SMPD1-203ENST00000527275 MECOMQ03112 1051 aa22.49■■□□□ 1.19
SMPD1-203ENST00000527275 SPTY2D1Q68D10 685 aaPredicted RBP22.49■■□□□ 1.19
SMPD1-203ENST00000527275 NSUN4Q96CB9 384 aaKnown RBP22.49■■□□□ 1.19
SMPD1-203ENST00000527275 MXD3Q9BW11 206 aa22.49■■□□□ 1.19
SMPD1-203ENST00000527275 YBX3P16989 372 aaKnown RBP eCLIP22.48■■□□□ 1.19
SMPD1-203ENST00000527275 CCDC129Q6ZRS4 1044 aa22.48■■□□□ 1.19
SMPD1-203ENST00000527275 ARHGAP27Q6ZUM4 889 aa22.48■■□□□ 1.19
SMPD1-203ENST00000527275 LSG1Q9H089 658 aaKnown RBP22.48■■□□□ 1.19
SMPD1-203ENST00000527275 PALD1Q9ULE6 856 aa22.48■■□□□ 1.19
SMPD1-203ENST00000527275 MAST3O60307 1309 aa22.48■■□□□ 1.19
SMPD1-203ENST00000527275 RAD50Q92878 1312 aa22.48■■□□□ 1.19
SMPD1-203ENST00000527275 PRELPP51888 382 aa22.48■■□□□ 1.19
SMPD1-203ENST00000527275 STRIP1Q5VSL9 837 aa22.48■■□□□ 1.19
SMPD1-203ENST00000527275 CERS5Q8N5B7 392 aa22.48■■□□□ 1.19
SMPD1-203ENST00000527275 M0R2C6 588 aa22.47■■□□□ 1.19
SMPD1-203ENST00000527275 HSPA4P34932 840 aa22.47■■□□□ 1.19
SMPD1-203ENST00000527275 ADGRA1Q86SQ6 560 aa22.47■■□□□ 1.19
SMPD1-203ENST00000527275 CHMP5Q9NZZ3 219 aa22.47■■□□□ 1.19
SMPD1-203ENST00000527275 CYP7A1P22680 504 aa22.46■■□□□ 1.19
SMPD1-203ENST00000527275 NAA16Q6N069 864 aaPredicted RBP22.46■■□□□ 1.19
SMPD1-203ENST00000527275 DZIP1Q86YF9 867 aaKnown RBP22.46■■□□□ 1.19
SMPD1-203ENST00000527275 NIM1KQ8IY84 436 aa22.46■■□□□ 1.19
SMPD1-203ENST00000527275 USP17L3A6NCW0 530 aa22.46■■□□□ 1.19
SMPD1-203ENST00000527275 USP17L4A6NCW7 530 aa22.46■■□□□ 1.19
SMPD1-203ENST00000527275 HSP90AA1P07900 732 aaKnown RBP22.46■■□□□ 1.19
SMPD1-203ENST00000527275 DACT2Q5SW24 774 aa22.46■■□□□ 1.19
SMPD1-203ENST00000527275 USP17L1Q7RTZ2 530 aa22.46■■□□□ 1.19
SMPD1-203ENST00000527275 JDP2Q8WYK2 163 aa22.46■■□□□ 1.19
SMPD1-203ENST00000527275 IL17RAQ96F46 866 aa22.46■■□□□ 1.19
SMPD1-203ENST00000527275 ZNRF3Q9ULT6 936 aa22.46■■□□□ 1.19
SMPD1-203ENST00000527275 CCDC88AQ3V6T2 1871 aa22.45■■□□□ 1.18
SMPD1-203ENST00000527275 CCDC171Q6TFL3 1326 aa22.45■■□□□ 1.18
SMPD1-203ENST00000527275 RAD17O75943 681 aa22.44■■□□□ 1.18
SMPD1-203ENST00000527275 NEK4P51957 841 aa22.44■■□□□ 1.18
SMPD1-203ENST00000527275 DIXDC1Q155Q3 683 aa22.44■■□□□ 1.18
SMPD1-203ENST00000527275 MIGA1Q8NAN2 632 aa22.44■■□□□ 1.18
SMPD1-203ENST00000527275 PTH1RQ03431 593 aa22.43■■□□□ 1.18
SMPD1-203ENST00000527275 F8W031 263 aaPredicted RBP22.43■■□□□ 1.18
SMPD1-203ENST00000527275 GPAA1O43292 621 aa22.43■■□□□ 1.18
SMPD1-203ENST00000527275 DDIT3P35638 169 aa22.43■■□□□ 1.18
SMPD1-203ENST00000527275 VPS53Q5VIR6 699 aa22.42■■□□□ 1.18
SMPD1-203ENST00000527275 AIDAQ96BJ3 306 aa22.42■■□□□ 1.18
SMPD1-203ENST00000527275 SUGT1Q9Y2Z0 365 aa22.42■■□□□ 1.18
SMPD1-203ENST00000527275 IGSF3O75054 1194 aa22.42■■□□□ 1.18
SMPD1-203ENST00000527275 MBD4O95243 580 aa22.41■■□□□ 1.18
SMPD1-203ENST00000527275 FOXD4L1Q9NU39 408 aa22.41■■□□□ 1.18
SMPD1-203ENST00000527275 TTF2Q9UNY4 1162 aaKnown RBP22.41■■□□□ 1.18
SMPD1-203ENST00000527275 ZNF646O15015 1829 aaPredicted RBP22.41■■□□□ 1.18
SMPD1-203ENST00000527275 PSMD14O00487 310 aa22.4■■□□□ 1.18
SMPD1-203ENST00000527275 FKBP1AP62942 108 aaKnown RBP22.4■■□□□ 1.18
SMPD1-203ENST00000527275 CXCL9Q07325 125 aa22.4■■□□□ 1.18
SMPD1-203ENST00000527275 KIAA0825Q8IV33 1275 aa22.4■■□□□ 1.18
SMPD1-203ENST00000527275 TMED8Q6PL24 325 aaPredicted RBP22.4■■□□□ 1.18
SMPD1-203ENST00000527275 STRBPQ96SI9 672 aaKnown RBP22.4■■□□□ 1.18
SMPD1-203ENST00000527275 ARMT1Q9H993 441 aa22.4■■□□□ 1.18
SMPD1-203ENST00000527275 VIL1P09327 827 aaKnown RBP22.39■■□□□ 1.18
SMPD1-203ENST00000527275 HSPD1P10809 573 aaKnown RBP22.39■■□□□ 1.18
SMPD1-203ENST00000527275 LMNB1P20700 586 aa22.39■■□□□ 1.18
SMPD1-203ENST00000527275 GSTO1P78417 241 aa22.39■■□□□ 1.18
SMPD1-203ENST00000527275 GPR162Q16538 588 aa22.39■■□□□ 1.18
SMPD1-203ENST00000527275 LCORLQ8N3X6 602 aa22.39■■□□□ 1.18
SMPD1-203ENST00000527275 MAP4K1Q92918 833 aa22.39■■□□□ 1.18
SMPD1-203ENST00000527275 CIZ1Q9ULV3 898 aaPredicted RBP22.39■■□□□ 1.18
SMPD1-203ENST00000527275 MAST2Q6P0Q8 1798 aa22.39■■□□□ 1.18
SMPD1-203ENST00000527275 MYH2Q9UKX2 1941 aa22.39■■□□□ 1.17
SMPD1-203ENST00000527275 MAGEB6P1A0A0J9YX57 407 aa22.39■■□□□ 1.17
SMPD1-203ENST00000527275 RIOK1Q9BRS2 568 aaKnown RBP22.39■■□□□ 1.17
SMPD1-203ENST00000527275 AATFQ9NY61 560 aaKnown RBP eCLIP22.39■■□□□ 1.17
SMPD1-203ENST00000527275 SNX14Q9Y5W7 946 aa22.39■■□□□ 1.17
SMPD1-203ENST00000527275 PSME4Q14997 1843 aa22.39■■□□□ 1.17
SMPD1-203ENST00000527275 MCM2P49736 904 aa22.38■■□□□ 1.17
SMPD1-203ENST00000527275 SCNN1DP51172 638 aa22.38■■□□□ 1.17
SMPD1-203ENST00000527275 FOXP2O15409 715 aa22.38■■□□□ 1.17
SMPD1-203ENST00000527275 DYNLL1P63167 89 aaKnown RBP22.38■■□□□ 1.17
SMPD1-203ENST00000527275 RSBN1LQ6PCB5 846 aaPredicted RBP22.38■■□□□ 1.17
SMPD1-203ENST00000527275 ZBTB12Q9Y330 459 aaPredicted RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms