RNA–Protein interactions for RNA: ENST00000527254.5

MS4A6A-207, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 5

Gene MS4A6A, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-207ENST00000527254 IFT172Q9UG01 1749 aa8.5□□□□□ -1.05
MS4A6A-207ENST00000527254 ZNF232Q9UNY5 417 aa8.5□□□□□ -1.05
MS4A6A-207ENST00000527254 THRAP3Q9Y2W1 955 aaKnown RBP8.5□□□□□ -1.05
MS4A6A-207ENST00000527254 LRP5O75197 1615 aa8.5□□□□□ -1.05
MS4A6A-207ENST00000527254 TRIM37O94972 964 aa8.49□□□□□ -1.05
MS4A6A-207ENST00000527254 ADH7P40394 386 aa8.49□□□□□ -1.05
MS4A6A-207ENST00000527254 SPEM2Q0P670 501 aa8.49□□□□□ -1.05
MS4A6A-207ENST00000527254 TRIM28Q13263 835 aaKnown RBP8.49□□□□□ -1.05
MS4A6A-207ENST00000527254 DEPDC4Q8N2C3 294 aa8.49□□□□□ -1.05
MS4A6A-207ENST00000527254 TNFRSF25Q93038 417 aa8.49□□□□□ -1.05
MS4A6A-207ENST00000527254 HSH2DQ96JZ2 352 aa8.49□□□□□ -1.05
MS4A6A-207ENST00000527254 CALR3Q96L12 384 aaKnown RBP8.49□□□□□ -1.05
MS4A6A-207ENST00000527254 ZFP64Q9NPA5 681 aa8.49□□□□□ -1.05
MS4A6A-207ENST00000527254 TULP4Q9NRJ4 1543 aa8.49□□□□□ -1.05
MS4A6A-207ENST00000527254 ADGRB2O60241 1585 aa8.48□□□□□ -1.05
MS4A6A-207ENST00000527254 SPDYE3A6NKU9 549 aa8.48□□□□□ -1.05
MS4A6A-207ENST00000527254 BACH1O14867 736 aa8.48□□□□□ -1.05
MS4A6A-207ENST00000527254 SKIP12755 728 aa8.48□□□□□ -1.05
MS4A6A-207ENST00000527254 ZC3H6P61129 1189 aaKnown RBP8.48□□□□□ -1.05
MS4A6A-207ENST00000527254 CDK19Q9BWU1 502 aa8.48□□□□□ -1.05
MS4A6A-207ENST00000527254 PRDM6Q9NQX0 595 aa8.48□□□□□ -1.05
MS4A6A-207ENST00000527254 COL14A1Q05707 1796 aaKnown RBP8.48□□□□□ -1.05
MS4A6A-207ENST00000527254 KIAA0232Q92628 1395 aa8.48□□□□□ -1.05
MS4A6A-207ENST00000527254 SELPP16109 830 aa8.47□□□□□ -1.05
MS4A6A-207ENST00000527254 NCOA4Q13772 614 aa8.47□□□□□ -1.05
MS4A6A-207ENST00000527254 CHRNA2Q15822 529 aa8.47□□□□□ -1.05
MS4A6A-207ENST00000527254 WASHC4Q2M389 1173 aa8.47□□□□□ -1.05
MS4A6A-207ENST00000527254 EML3Q32P44 896 aa8.47□□□□□ -1.05
MS4A6A-207ENST00000527254 NLRP13Q86W25 1043 aa8.47□□□□□ -1.05
MS4A6A-207ENST00000527254 TCP11L2Q8N4U5 519 aa8.47□□□□□ -1.05
MS4A6A-207ENST00000527254 ABTB2Q8N961 1025 aa8.47□□□□□ -1.05
MS4A6A-207ENST00000527254 ZNF280CQ8ND82 737 aa8.47□□□□□ -1.05
MS4A6A-207ENST00000527254 PBXIP1Q96AQ6 731 aa8.47□□□□□ -1.05
MS4A6A-207ENST00000527254 PUS7Q96PZ0 661 aaKnown RBP8.47□□□□□ -1.05
MS4A6A-207ENST00000527254 NOD1Q9Y239 953 aa8.47□□□□□ -1.05
MS4A6A-207ENST00000527254 ACEP12821 1306 aa8.47□□□□□ -1.05
MS4A6A-207ENST00000527254 ADGRB1O14514 1584 aa8.47□□□□□ -1.05
MS4A6A-207ENST00000527254 BRWD3Q6RI45 1802 aa8.47□□□□□ -1.05
MS4A6A-207ENST00000527254 PLCH1Q4KWH8 1693 aa8.46□□□□□ -1.05
MS4A6A-207ENST00000527254 CCDC27Q2M243 656 aa8.46□□□□□ -1.06
MS4A6A-207ENST00000527254 SHISA2Q6UWI4 295 aa8.46□□□□□ -1.06
MS4A6A-207ENST00000527254 NEUROD4Q9HD90 331 aa8.46□□□□□ -1.06
MS4A6A-207ENST00000527254 USP35Q9P2H5 1018 aa8.46□□□□□ -1.06
MS4A6A-207ENST00000527254 HCN4Q9Y3Q4 1203 aa8.46□□□□□ -1.06
MS4A6A-207ENST00000527254 POLR3AO14802 1390 aaPredicted RBP8.46□□□□□ -1.06
MS4A6A-207ENST00000527254 CPDO75976 1380 aa8.46□□□□□ -1.06
MS4A6A-207ENST00000527254 ATP7BP35670 1465 aa8.45□□□□□ -1.06
MS4A6A-207ENST00000527254 GCP02774 474 aa8.45□□□□□ -1.06
MS4A6A-207ENST00000527254 TRAPPC3LQ5T215 181 aa8.45□□□□□ -1.06
MS4A6A-207ENST00000527254 RHPN1Q8TCX5 695 aa8.45□□□□□ -1.06
MS4A6A-207ENST00000527254 SPON1Q9HCB6 807 aa8.45□□□□□ -1.06
MS4A6A-207ENST00000527254 KIAA1024Q9UPX6 916 aa8.45□□□□□ -1.06
MS4A6A-207ENST00000527254 BRD4O60885 1362 aaPredicted RBP8.45□□□□□ -1.06
MS4A6A-207ENST00000527254 RAB3GAP2Q9H2M9 1393 aa8.45□□□□□ -1.06
MS4A6A-207ENST00000527254 ALS2Q96Q42 1657 aa8.44□□□□□ -1.06
MS4A6A-207ENST00000527254 TRPM3Q9HCF6 1732 aaPredicted RBP8.44□□□□□ -1.06
MS4A6A-207ENST00000527254 RGPD8O14715 1765 aaPredicted RBP8.44□□□□□ -1.06
MS4A6A-207ENST00000527254 SERTM1A2A2V5 107 aa8.44□□□□□ -1.06
MS4A6A-207ENST00000527254 SFI1A8K8P3 1242 aa8.44□□□□□ -1.06
MS4A6A-207ENST00000527254 PLSCR1O15162 318 aa8.44□□□□□ -1.06
MS4A6A-207ENST00000527254 MBTPS1Q14703 1052 aa8.44□□□□□ -1.06
MS4A6A-207ENST00000527254 LCE3BQ5TA77 95 aa8.44□□□□□ -1.06
MS4A6A-207ENST00000527254 NUTM2GQ5VZR2 741 aa8.44□□□□□ -1.06
MS4A6A-207ENST00000527254 LARP1Q6PKG0 1096 aaKnown RBP8.44□□□□□ -1.06
MS4A6A-207ENST00000527254 GLMNQ92990 594 aa8.44□□□□□ -1.06
MS4A6A-207ENST00000527254 CEP63Q96MT8 703 aa8.44□□□□□ -1.06
MS4A6A-207ENST00000527254 ALG2Q9H553 416 aa8.44□□□□□ -1.06
MS4A6A-207ENST00000527254 BRD7Q9NPI1 651 aa8.44□□□□□ -1.06
MS4A6A-207ENST00000527254 NRAPQ86VF7 1730 aa8.43□□□□□ -1.06
MS4A6A-207ENST00000527254 A0A0A0MRY4 1105 aa8.43□□□□□ -1.06
MS4A6A-207ENST00000527254 ZBTB7BO15156 539 aaPredicted RBP8.43□□□□□ -1.06
MS4A6A-207ENST00000527254 KCNQ2O43526 872 aa8.43□□□□□ -1.06
MS4A6A-207ENST00000527254 YY1P25490 414 aa8.43□□□□□ -1.06
MS4A6A-207ENST00000527254 ADGRE1Q14246 886 aa8.43□□□□□ -1.06
MS4A6A-207ENST00000527254 TSPAN10Q9H1Z9 355 aaPredicted RBP8.43□□□□□ -1.06
MS4A6A-207ENST00000527254 PPP1R1BQ9UD71 204 aaPredicted RBP8.43□□□□□ -1.06
MS4A6A-207ENST00000527254 USP19O94966 1318 aa8.43□□□□□ -1.06
MS4A6A-207ENST00000527254 SSH2Q76I76 1423 aa8.43□□□□□ -1.06
MS4A6A-207ENST00000527254 THSD7AQ9UPZ6 1657 aa8.43□□□□□ -1.06
MS4A6A-207ENST00000527254 RGPD1P0DJD0 1748 aa8.43□□□□□ -1.06
MS4A6A-207ENST00000527254 ABCA3Q99758 1704 aa8.43□□□□□ -1.06
MS4A6A-207ENST00000527254 CDK11BP21127 795 aaKnown RBP8.42□□□□□ -1.06
MS4A6A-207ENST00000527254 SOX11P35716 441 aa8.42□□□□□ -1.06
MS4A6A-207ENST00000527254 TBC1D8BQ0IIM8 1120 aa8.42□□□□□ -1.06
MS4A6A-207ENST00000527254 SND1Q7KZF4 910 aaKnown RBP eCLIP8.42□□□□□ -1.06
MS4A6A-207ENST00000527254 BHMTQ93088 406 aa8.42□□□□□ -1.06
MS4A6A-207ENST00000527254 NACC1Q96RE7 527 aa8.42□□□□□ -1.06
MS4A6A-207ENST00000527254 IGFLR1Q9H665 355 aa8.42□□□□□ -1.06
MS4A6A-207ENST00000527254 SRPK2P78362 688 aaKnown RBP8.41□□□□□ -1.06
MS4A6A-207ENST00000527254 TYRO3Q06418 890 aa8.41□□□□□ -1.06
MS4A6A-207ENST00000527254 NUDT8Q8WV74 236 aa8.41□□□□□ -1.06
MS4A6A-207ENST00000527254 PHACTR1Q9C0D0 580 aa8.41□□□□□ -1.06
MS4A6A-207ENST00000527254 KCNH4Q9UQ05 1017 aa8.41□□□□□ -1.06
MS4A6A-207ENST00000527254 AATKQ6ZMQ8 1374 aa8.4□□□□□ -1.06
MS4A6A-207ENST00000527254 USP17L5A8MUK1 530 aa8.4□□□□□ -1.06
MS4A6A-207ENST00000527254 HYAL3O43820 417 aaPredicted RBP8.4□□□□□ -1.06
MS4A6A-207ENST00000527254 LILRB5O75023 590 aa8.4□□□□□ -1.06
MS4A6A-207ENST00000527254 DDB1Q16531 1140 aa8.4□□□□□ -1.06
MS4A6A-207ENST00000527254 TPCN2Q8NHX9 752 aa8.4□□□□□ -1.06
MS4A6A-207ENST00000527254 SUSD3Q96L08 255 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms