RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 PTPN18Q99952 460 aa23.65■■□□□ 1.38
CAPN1-206ENST00000526966 CRKP46108 304 aa23.64■■□□□ 1.37
CAPN1-206ENST00000526966 OTUD7BQ6GQQ9 843 aa23.64■■□□□ 1.37
CAPN1-206ENST00000526966 FBXO33Q7Z6M2 555 aa23.64■■□□□ 1.37
CAPN1-206ENST00000526966 CDAN1Q8IWY9 1227 aa23.64■■□□□ 1.37
CAPN1-206ENST00000526966 BICC1Q9H694 974 aaKnown RBP23.64■■□□□ 1.37
CAPN1-206ENST00000526966 MYH13Q9UKX3 1938 aa23.63■■□□□ 1.37
CAPN1-206ENST00000526966 ANKRD44Q8N8A2 993 aa23.63■■□□□ 1.37
CAPN1-206ENST00000526966 VGLL2Q8N8G2 317 aa23.63■■□□□ 1.37
CAPN1-206ENST00000526966 OPTNQ96CV9 577 aa23.63■■□□□ 1.37
CAPN1-206ENST00000526966 ERO1AQ96HE7 468 aa23.63■■□□□ 1.37
CAPN1-206ENST00000526966 ELP3Q9H9T3 547 aa23.63■■□□□ 1.37
CAPN1-206ENST00000526966 HDLBPQ00341 1268 aaKnown RBP23.62■■□□□ 1.37
CAPN1-206ENST00000526966 GRIK5Q16478 980 aa23.62■■□□□ 1.37
CAPN1-206ENST00000526966 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.62■■□□□ 1.37
CAPN1-206ENST00000526966 MS4A4AQ96JQ5 239 aa23.62■■□□□ 1.37
CAPN1-206ENST00000526966 PCDH10Q9P2E7 1040 aa23.62■■□□□ 1.37
CAPN1-206ENST00000526966 BRCA2P51587 3418 aa23.62■■□□□ 1.37
CAPN1-206ENST00000526966 LRRC24Q50LG9 513 aa23.61■■□□□ 1.37
CAPN1-206ENST00000526966 FAM9BQ8IZU0 186 aa23.61■■□□□ 1.37
CAPN1-206ENST00000526966 CD99L2Q8TCZ2 262 aa23.61■■□□□ 1.37
CAPN1-206ENST00000526966 TMEM39BQ9GZU3 492 aa23.61■■□□□ 1.37
CAPN1-206ENST00000526966 TCP10L2B9ZVM9 353 aa23.6■■□□□ 1.37
CAPN1-206ENST00000526966 ZEB1P37275 1124 aaPredicted RBP23.6■■□□□ 1.37
CAPN1-206ENST00000526966 TNNI2P48788 182 aa23.6■■□□□ 1.37
CAPN1-206ENST00000526966 INTS3Q68E01 1043 aaKnown RBP23.6■■□□□ 1.37
CAPN1-206ENST00000526966 MRPL50Q8N5N7 158 aaKnown RBP23.6■■□□□ 1.37
CAPN1-206ENST00000526966 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.6■■□□□ 1.37
CAPN1-206ENST00000526966 TBC1D22AQ8WUA7 517 aa23.6■■□□□ 1.37
CAPN1-206ENST00000526966 IQSEC3Q9UPP2 1182 aaPredicted RBP23.6■■□□□ 1.37
CAPN1-206ENST00000526966 PTPN22Q9Y2R2 807 aa23.6■■□□□ 1.37
CAPN1-206ENST00000526966 PDE8BO95263 885 aa23.59■■□□□ 1.37
CAPN1-206ENST00000526966 VGLL4Q14135 290 aa23.59■■□□□ 1.37
CAPN1-206ENST00000526966 METTL24Q5JXM2 366 aa23.59■■□□□ 1.37
CAPN1-206ENST00000526966 VPS37DQ86XT2 251 aa23.59■■□□□ 1.37
CAPN1-206ENST00000526966 MAP3K9P80192 1104 aa23.58■■□□□ 1.37
CAPN1-206ENST00000526966 CAP1Q01518 475 aa23.58■■□□□ 1.37
CAPN1-206ENST00000526966 SP3Q02447 781 aa23.58■■□□□ 1.37
CAPN1-206ENST00000526966 CAVIN4Q5BKX8 364 aa23.58■■□□□ 1.37
CAPN1-206ENST00000526966 CNKSR2Q8WXI2 1034 aa23.58■■□□□ 1.37
CAPN1-206ENST00000526966 BRI3BPQ8WY22 251 aa23.58■■□□□ 1.37
CAPN1-206ENST00000526966 PTPRCP08575 1304 aa23.58■■□□□ 1.36
CAPN1-206ENST00000526966 KIF16BQ96L93 1317 aa23.58■■□□□ 1.36
CAPN1-206ENST00000526966 ZNF316A6NFI3 1004 aaPredicted RBP23.57■■□□□ 1.36
CAPN1-206ENST00000526966 CHAF1AQ13111 956 aaPredicted RBP23.57■■□□□ 1.36
CAPN1-206ENST00000526966 TEKT1Q969V4 418 aa23.57■■□□□ 1.36
CAPN1-206ENST00000526966 ARMC5Q96C12 935 aa23.57■■□□□ 1.36
CAPN1-206ENST00000526966 EFCC1Q9HA90 598 aa23.57■■□□□ 1.36
CAPN1-206ENST00000526966 POTEFA5A3E0 1075 aa23.56■■□□□ 1.36
CAPN1-206ENST00000526966 ZDHHC15Q96MV8 337 aa23.56■■□□□ 1.36
CAPN1-206ENST00000526966 MRIQ9BWK5 157 aa23.56■■□□□ 1.36
CAPN1-206ENST00000526966 GTF2A2P52657 109 aa23.55■■□□□ 1.36
CAPN1-206ENST00000526966 KLHDC4Q8TBB5 520 aa23.55■■□□□ 1.36
CAPN1-206ENST00000526966 SUGT1Q9Y2Z0 365 aa23.55■■□□□ 1.36
CAPN1-206ENST00000526966 CSADQ9Y600 493 aa23.55■■□□□ 1.36
CAPN1-206ENST00000526966 RPAP1Q9BWH6 1393 aaPredicted RBP23.54■■□□□ 1.36
CAPN1-206ENST00000526966 CCL15-CCL14A0A0B4J2E2 113 aa23.54■■□□□ 1.36
CAPN1-206ENST00000526966 SPDYE5A6NIY4 337 aa23.54■■□□□ 1.36
CAPN1-206ENST00000526966 FRAT2O75474 233 aaPredicted RBP23.54■■□□□ 1.36
CAPN1-206ENST00000526966 FGFR2P21802 821 aa23.54■■□□□ 1.36
CAPN1-206ENST00000526966 BCAMP50895 628 aa23.54■■□□□ 1.36
CAPN1-206ENST00000526966 CACNB3P54284 484 aa23.54■■□□□ 1.36
CAPN1-206ENST00000526966 CCL15Q16663 113 aa23.54■■□□□ 1.36
CAPN1-206ENST00000526966 FKBP1CQ5VVH2 108 aa23.54■■□□□ 1.36
CAPN1-206ENST00000526966 FAM83AQ86UY5 434 aa23.54■■□□□ 1.36
CAPN1-206ENST00000526966 USP44Q9H0E7 712 aa23.54■■□□□ 1.36
CAPN1-206ENST00000526966 MAST3O60307 1309 aa23.54■■□□□ 1.36
CAPN1-206ENST00000526966 PUM3Q15397 648 aaKnown RBP23.53■■□□□ 1.36
CAPN1-206ENST00000526966 TAF1CQ15572 869 aaPredicted RBP23.53■■□□□ 1.36
CAPN1-206ENST00000526966 APOBEC3HQ6NTF7 200 aaKnown RBP23.53■■□□□ 1.36
CAPN1-206ENST00000526966 FAM43AQ8N2R8 423 aa23.53■■□□□ 1.36
CAPN1-206ENST00000526966 OTUD5Q96G74 571 aa23.53■■□□□ 1.36
CAPN1-206ENST00000526966 SNCAIPQ9Y6H5 919 aa23.53■■□□□ 1.36
CAPN1-206ENST00000526966 ZSWIM8A7E2V4 1837 aa23.52■■□□□ 1.36
CAPN1-206ENST00000526966 ZFYVE28Q9HCC9 887 aa23.52■■□□□ 1.36
CAPN1-206ENST00000526966 TMOD2Q9NZR1 351 aa23.52■■□□□ 1.36
CAPN1-206ENST00000526966 IFIT1P09914 478 aaKnown RBP23.51■■□□□ 1.35
CAPN1-206ENST00000526966 RFX5P48382 616 aaPredicted RBP23.51■■□□□ 1.35
CAPN1-206ENST00000526966 HHIPL2Q6UWX4 724 aa23.51■■□□□ 1.35
CAPN1-206ENST00000526966 SSH1Q8WYL5 1049 aa23.51■■□□□ 1.35
CAPN1-206ENST00000526966 ERO1BQ86YB8 467 aa23.5■■□□□ 1.35
CAPN1-206ENST00000526966 HOOK2Q96ED9 719 aa23.5■■□□□ 1.35
CAPN1-206ENST00000526966 WRNIP1Q96S55 665 aa23.5■■□□□ 1.35
CAPN1-206ENST00000526966 ZCCHC17Q9NP64 241 aaKnown RBP23.5■■□□□ 1.35
CAPN1-206ENST00000526966 E9PSI1 815 aa23.49■■□□□ 1.35
CAPN1-206ENST00000526966 EYA2O00167 538 aa23.49■■□□□ 1.35
CAPN1-206ENST00000526966 ZNF333Q96JL9 665 aa23.49■■□□□ 1.35
CAPN1-206ENST00000526966 AK9Q5TCS8 1911 aa23.49■■□□□ 1.35
CAPN1-206ENST00000526966 ARHGEF6Q15052 776 aa23.48■■□□□ 1.35
CAPN1-206ENST00000526966 IRF6O14896 467 aa23.47■■□□□ 1.35
CAPN1-206ENST00000526966 CETPP11597 493 aa23.47■■□□□ 1.35
CAPN1-206ENST00000526966 WDR66Q8TBY9 1149 aa23.47■■□□□ 1.35
CAPN1-206ENST00000526966 LPIN2Q92539 896 aa23.47■■□□□ 1.35
CAPN1-206ENST00000526966 ZKSCAN4Q969J2 545 aaPredicted RBP23.47■■□□□ 1.35
CAPN1-206ENST00000526966 GCC1Q96CN9 775 aa23.47■■□□□ 1.35
CAPN1-206ENST00000526966 PTCH2Q9Y6C5 1203 aa23.47■■□□□ 1.35
CAPN1-206ENST00000526966 TLR2O60603 784 aa23.46■■□□□ 1.35
CAPN1-206ENST00000526966 SLC5A1P13866 664 aa23.46■■□□□ 1.35
CAPN1-206ENST00000526966 PPIL2Q13356 520 aa23.46■■□□□ 1.35
CAPN1-206ENST00000526966 SNAPC2Q13487 334 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms