RNA–Protein interactions for RNA: ENST00000526938.5

CTNND1-215, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-215ENST00000526938 SLC12A7Q9Y666 1083 aa10.08□□□□□ -0.8
CTNND1-215ENST00000526938 GOLGA8AA7E2F4 631 aa10.08□□□□□ -0.8
CTNND1-215ENST00000526938 NR1I2O75469 434 aa10.08□□□□□ -0.8
CTNND1-215ENST00000526938 LETM1O95202 739 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-215ENST00000526938 MARCKSP29966 332 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-215ENST00000526938 TBC1D9BQ66K14 1250 aa10.08□□□□□ -0.8
CTNND1-215ENST00000526938 C3orf67Q6ZVT6 689 aa10.08□□□□□ -0.8
CTNND1-215ENST00000526938 ZSCAN30Q86W11 494 aa10.08□□□□□ -0.8
CTNND1-215ENST00000526938 CCAR1Q8IX12 1150 aaKnown RBP10.08□□□□□ -0.8
CTNND1-215ENST00000526938 ZNF396Q96N95 335 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-215ENST00000526938 USP28Q96RU2 1077 aa10.08□□□□□ -0.8
CTNND1-215ENST00000526938 SPATA31A5Q5VU36 1347 aa10.08□□□□□ -0.8
CTNND1-215ENST00000526938 SPATA31A7Q8IWB4 1347 aa10.08□□□□□ -0.8
CTNND1-215ENST00000526938 KINO60870 393 aaKnown RBP10.08□□□□□ -0.8
CTNND1-215ENST00000526938 ISM2Q6H9L7 571 aa10.08□□□□□ -0.8
CTNND1-215ENST00000526938 TBC1D10CQ8IV04 446 aa10.08□□□□□ -0.8
CTNND1-215ENST00000526938 IFNL3Q8IZI9 196 aa10.08□□□□□ -0.8
CTNND1-215ENST00000526938 IL17RAQ96F46 866 aa10.08□□□□□ -0.8
CTNND1-215ENST00000526938 SLC26A6Q9BXS9 759 aa10.08□□□□□ -0.8
CTNND1-215ENST00000526938 BECN2A8MW95 431 aa10.07□□□□□ -0.8
CTNND1-215ENST00000526938 ZBTB43O43298 467 aa10.07□□□□□ -0.8
CTNND1-215ENST00000526938 EXOSC10Q01780 885 aaKnown RBP10.07□□□□□ -0.8
CTNND1-215ENST00000526938 LCORLQ8N3X6 602 aa10.07□□□□□ -0.8
CTNND1-215ENST00000526938 FSIP1Q8NA03 581 aa10.07□□□□□ -0.8
CTNND1-215ENST00000526938 UBAC1Q9BSL1 405 aa10.07□□□□□ -0.8
CTNND1-215ENST00000526938 SENP2Q9HC62 589 aa10.07□□□□□ -0.8
CTNND1-215ENST00000526938 THRAP3Q9Y2W1 955 aaKnown RBP10.07□□□□□ -0.8
CTNND1-215ENST00000526938 USP54Q70EL1 1684 aa10.07□□□□□ -0.8
CTNND1-215ENST00000526938 hCG_1642624A0A1W2PR95 340 aa10.07□□□□□ -0.8
CTNND1-215ENST00000526938 CTDNEP1O95476 244 aa10.07□□□□□ -0.8
CTNND1-215ENST00000526938 KIAA2012Q0VF49 1180 aa10.07□□□□□ -0.8
CTNND1-215ENST00000526938 LUZP1Q86V48 1076 aa10.07□□□□□ -0.8
CTNND1-215ENST00000526938 ALG1Q9BT22 464 aa10.07□□□□□ -0.8
CTNND1-215ENST00000526938 ZSCAN16Q9H4T2 348 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-215ENST00000526938 PHRF1Q9P1Y6 1649 aaKnown RBP10.07□□□□□ -0.8
CTNND1-215ENST00000526938 C5P01031 1676 aa10.07□□□□□ -0.8
CTNND1-215ENST00000526938 CYP2D7A0A087X1C5 515 aa10.06□□□□□ -0.8
CTNND1-215ENST00000526938 AKAP17AQ02040 695 aaKnown RBP10.06□□□□□ -0.8
CTNND1-215ENST00000526938 SART3Q15020 963 aaKnown RBP10.06□□□□□ -0.8
CTNND1-215ENST00000526938 TPTE2Q6XPS3 522 aa10.06□□□□□ -0.8
CTNND1-215ENST00000526938 AK7Q96M32 723 aa10.06□□□□□ -0.8
CTNND1-215ENST00000526938 STRBPQ96SI9 672 aaKnown RBP10.06□□□□□ -0.8
CTNND1-215ENST00000526938 TRIM5Q9C035 493 aa10.06□□□□□ -0.8
CTNND1-215ENST00000526938 TTC12Q9H892 705 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-215ENST00000526938 ANGEL1Q9UNK9 670 aaKnown RBP10.06□□□□□ -0.8
CTNND1-215ENST00000526938 MRC1P22897 1456 aa10.06□□□□□ -0.8
CTNND1-215ENST00000526938 BIN1O00499 593 aa10.06□□□□□ -0.8
CTNND1-215ENST00000526938 IARSP41252 1262 aaKnown RBP10.06□□□□□ -0.8
CTNND1-215ENST00000526938 RPS8P62241 208 aaKnown RBP10.06□□□□□ -0.8
CTNND1-215ENST00000526938 UBE3CQ15386 1083 aa10.06□□□□□ -0.8
CTNND1-215ENST00000526938 CYB5R4Q7L1T6 521 aa10.06□□□□□ -0.8
CTNND1-215ENST00000526938 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.06□□□□□ -0.8
CTNND1-215ENST00000526938 DNAJC25Q9H1X3 360 aa10.06□□□□□ -0.8
CTNND1-215ENST00000526938 SCN11AQ9UI33 1791 aa10.06□□□□□ -0.8
CTNND1-215ENST00000526938 A0A1B0GVL5 298 aa10.06□□□□□ -0.8
CTNND1-215ENST00000526938 GOLGA6L19H0YKK7 550 aa10.06□□□□□ -0.8
CTNND1-215ENST00000526938 DYNLL1P63167 89 aaKnown RBP10.06□□□□□ -0.8
CTNND1-215ENST00000526938 ANO6Q4KMQ2 910 aa10.06□□□□□ -0.8
CTNND1-215ENST00000526938 NAA16Q6N069 864 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-215ENST00000526938 ZNF274Q96GC6 653 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-215ENST00000526938 COL18A1P39060 1754 aa10.05□□□□□ -0.8
CTNND1-215ENST00000526938 PATL2C9JE40 543 aaKnown RBP10.05□□□□□ -0.8
CTNND1-215ENST00000526938 NTSR2O95665 410 aa10.05□□□□□ -0.8
CTNND1-215ENST00000526938 RESTQ13127 1097 aa10.05□□□□□ -0.8
CTNND1-215ENST00000526938 PGBD1Q96JS3 809 aa10.05□□□□□ -0.8
CTNND1-215ENST00000526938 GPR101Q96P66 508 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-215ENST00000526938 ZSWIM5Q9P217 1185 aa10.05□□□□□ -0.8
CTNND1-215ENST00000526938 R3HCC1Q9Y3T6 440 aaKnown RBP10.05□□□□□ -0.8
CTNND1-215ENST00000526938 KCPQ6ZWJ8 1503 aa10.05□□□□□ -0.8
CTNND1-215ENST00000526938 MAGEB6P1A0A0J9YX57 407 aa10.05□□□□□ -0.8
CTNND1-215ENST00000526938 TYRO3Q06418 890 aa10.05□□□□□ -0.8
CTNND1-215ENST00000526938 LLPHQ9BRT6 129 aaKnown RBP10.05□□□□□ -0.8
CTNND1-215ENST00000526938 CCDC39Q9UFE4 941 aa10.05□□□□□ -0.8
CTNND1-215ENST00000526938 SMIM22K7EJ46 135 aa10.05□□□□□ -0.8
CTNND1-215ENST00000526938 ANTXR2P58335 489 aa10.05□□□□□ -0.8
CTNND1-215ENST00000526938 FAM196AQ6ZSG2 479 aa10.05□□□□□ -0.8
CTNND1-215ENST00000526938 VGLL2Q8N8G2 317 aa10.05□□□□□ -0.8
CTNND1-215ENST00000526938 AATFQ9NY61 560 aaKnown RBP eCLIP10.05□□□□□ -0.8
CTNND1-215ENST00000526938 TNS2Q63HR2 1409 aa10.05□□□□□ -0.8
CTNND1-215ENST00000526938 UBE2Q2LH0YL09 131 aa10.04□□□□□ -0.8
CTNND1-215ENST00000526938 KLRK1P26718 216 aa10.04□□□□□ -0.8
CTNND1-215ENST00000526938 CLCN1P35523 988 aa10.04□□□□□ -0.8
CTNND1-215ENST00000526938 ZNF165P49910 485 aa10.04□□□□□ -0.8
CTNND1-215ENST00000526938 WTAPQ15007 396 aa10.04□□□□□ -0.8
CTNND1-215ENST00000526938 NKX2-3Q8TAU0 364 aa10.04□□□□□ -0.8
CTNND1-215ENST00000526938 PPP1R9BQ96SB3 815 aa10.04□□□□□ -0.8
CTNND1-215ENST00000526938 TRAPPC3LQ5T215 181 aa10.04□□□□□ -0.8
CTNND1-215ENST00000526938 MB21D2Q8IYB1 491 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-215ENST00000526938 C17orf53Q8N3J3 647 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-215ENST00000526938 ARID3AQ99856 593 aa10.04□□□□□ -0.8
CTNND1-215ENST00000526938 DDX19AQ9NUU7 478 aaKnown RBP10.04□□□□□ -0.8
CTNND1-215ENST00000526938 MINPP1Q9UNW1 487 aa10.04□□□□□ -0.8
CTNND1-215ENST00000526938 NEDD4P46934 1319 aa10.04□□□□□ -0.8
CTNND1-215ENST00000526938 FOXP2O15409 715 aa10.03□□□□□ -0.8
CTNND1-215ENST00000526938 SAFBQ15424 915 aaKnown RBP eCLIP10.03□□□□□ -0.8
CTNND1-215ENST00000526938 DZIP1Q86YF9 867 aaKnown RBP10.03□□□□□ -0.8
CTNND1-215ENST00000526938 TMEM87AQ8NBN3 555 aa10.03□□□□□ -0.8
CTNND1-215ENST00000526938 FDPSP14324 419 aaKnown RBP10.03□□□□□ -0.8
CTNND1-215ENST00000526938 AKNAD1Q5T1N1 836 aa10.03□□□□□ -0.8
CTNND1-215ENST00000526938 TRIM22Q8IYM9 498 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms