RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 BRAPQ7Z569 592 aa13.58□□□□□ -0.24
LINC01001-201ENST00000526704 WDR19Q8NEZ3 1342 aa13.57□□□□□ -0.24
LINC01001-201ENST00000526704 DHX16O60231 1041 aaKnown RBP13.57□□□□□ -0.24
LINC01001-201ENST00000526704 CSF1RP07333 972 aa13.57□□□□□ -0.24
LINC01001-201ENST00000526704 SYCP1Q15431 976 aa13.57□□□□□ -0.24
LINC01001-201ENST00000526704 DPCR1Q3MIW9 517 aa13.57□□□□□ -0.24
LINC01001-201ENST00000526704 NBPF11Q86T75 865 aa13.57□□□□□ -0.24
LINC01001-201ENST00000526704 FAM89AQ96GI7 184 aa13.57□□□□□ -0.24
LINC01001-201ENST00000526704 SDF4Q9BRK5 362 aa13.57□□□□□ -0.24
LINC01001-201ENST00000526704 NAT10Q9H0A0 1025 aaKnown RBP13.57□□□□□ -0.24
LINC01001-201ENST00000526704 PAXBP1Q9Y5B6 917 aa13.57□□□□□ -0.24
LINC01001-201ENST00000526704 MROH7-TTC4A0A0A0MT08 1334 aa13.57□□□□□ -0.24
LINC01001-201ENST00000526704 SPTLC2O15270 562 aa13.57□□□□□ -0.24
LINC01001-201ENST00000526704 SKILP12757 684 aa13.57□□□□□ -0.24
LINC01001-201ENST00000526704 IL2RBP14784 551 aa13.57□□□□□ -0.24
LINC01001-201ENST00000526704 KIF23Q02241 960 aaPredicted RBP13.57□□□□□ -0.24
LINC01001-201ENST00000526704 TRIM28Q13263 835 aaKnown RBP13.57□□□□□ -0.24
LINC01001-201ENST00000526704 NYAP1Q6ZVC0 841 aa13.57□□□□□ -0.24
LINC01001-201ENST00000526704 FILIP1Q7Z7B0 1213 aa13.57□□□□□ -0.24
LINC01001-201ENST00000526704 KIAA1468Q9P260 1216 aa13.57□□□□□ -0.24
LINC01001-201ENST00000526704 ZNF330Q9Y3S2 320 aaPredicted RBP13.57□□□□□ -0.24
LINC01001-201ENST00000526704 LRP6O75581 1613 aa13.56□□□□□ -0.24
LINC01001-201ENST00000526704 MCAMP43121 646 aa13.56□□□□□ -0.24
LINC01001-201ENST00000526704 SF3A1Q15459 793 aaKnown RBP13.56□□□□□ -0.24
LINC01001-201ENST00000526704 TAF7LQ5H9L4 462 aa13.56□□□□□ -0.24
LINC01001-201ENST00000526704 CEP135Q66GS9 1140 aa13.56□□□□□ -0.24
LINC01001-201ENST00000526704 RALYLQ86SE5 291 aaKnown RBP13.56□□□□□ -0.24
LINC01001-201ENST00000526704 NKX2-3Q8TAU0 364 aa13.56□□□□□ -0.24
LINC01001-201ENST00000526704 BPIFA3Q9BQP9 254 aa13.56□□□□□ -0.24
LINC01001-201ENST00000526704 PRDM10Q9NQV6 1147 aa13.56□□□□□ -0.24
LINC01001-201ENST00000526704 IFIT5Q13325 482 aaKnown RBP13.56□□□□□ -0.24
LINC01001-201ENST00000526704 AXDND1Q5T1B0 1012 aaPredicted RBP13.56□□□□□ -0.24
LINC01001-201ENST00000526704 DENND2AQ9ULE3 1009 aa13.56□□□□□ -0.24
LINC01001-201ENST00000526704 LRP5O75197 1615 aa13.55□□□□□ -0.24
LINC01001-201ENST00000526704 ZNF213O14771 459 aa13.55□□□□□ -0.24
LINC01001-201ENST00000526704 CPLX1O14810 134 aa13.55□□□□□ -0.24
LINC01001-201ENST00000526704 ZBTB38Q8NAP3 1195 aaPredicted RBP13.55□□□□□ -0.24
LINC01001-201ENST00000526704 CCDC112Q8NEF3 446 aa13.55□□□□□ -0.24
LINC01001-201ENST00000526704 CBX1P83916 185 aa13.55□□□□□ -0.24
LINC01001-201ENST00000526704 ANO1Q5XXA6 986 aa13.55□□□□□ -0.24
LINC01001-201ENST00000526704 BRINP3Q76B58 766 aa13.55□□□□□ -0.24
LINC01001-201ENST00000526704 TBC1D10CQ8IV04 446 aa13.55□□□□□ -0.24
LINC01001-201ENST00000526704 SYNE4Q8N205 404 aa13.55□□□□□ -0.24
LINC01001-201ENST00000526704 CARD10Q9BWT7 1032 aa13.55□□□□□ -0.24
LINC01001-201ENST00000526704 OSBPL5Q9H0X9 879 aaPredicted RBP13.55□□□□□ -0.24
LINC01001-201ENST00000526704 RIPOR2Q9Y4F9 1068 aa13.55□□□□□ -0.24
LINC01001-201ENST00000526704 ZMYM6O95789 1325 aa13.55□□□□□ -0.24
LINC01001-201ENST00000526704 U2AF2P26368 475 aaKnown RBP eCLIP13.54□□□□□ -0.24
LINC01001-201ENST00000526704 ADD2P35612 726 aa13.54□□□□□ -0.24
LINC01001-201ENST00000526704 KIF6Q6ZMV9 814 aa13.54□□□□□ -0.24
LINC01001-201ENST00000526704 KCND1Q9NSA2 647 aa13.54□□□□□ -0.24
LINC01001-201ENST00000526704 TIAM2Q8IVF5 1701 aa13.54□□□□□ -0.24
LINC01001-201ENST00000526704 NHSL1Q5SYE7 1610 aa13.54□□□□□ -0.24
LINC01001-201ENST00000526704 ZNF202O95125 648 aa13.54□□□□□ -0.24
LINC01001-201ENST00000526704 PFKFB1P16118 471 aa13.54□□□□□ -0.24
LINC01001-201ENST00000526704 NAA30Q147X3 362 aaPredicted RBP13.54□□□□□ -0.24
LINC01001-201ENST00000526704 METTL24Q5JXM2 366 aa13.54□□□□□ -0.24
LINC01001-201ENST00000526704 CYB5R4Q7L1T6 521 aa13.54□□□□□ -0.24
LINC01001-201ENST00000526704 DNAJC10Q8IXB1 793 aa13.54□□□□□ -0.24
LINC01001-201ENST00000526704 CCAR2Q8N163 923 aaKnown RBP13.54□□□□□ -0.24
LINC01001-201ENST00000526704 AIFM3Q96NN9 605 aa13.54□□□□□ -0.24
LINC01001-201ENST00000526704 CDHR2Q9BYE9 1310 aa13.54□□□□□ -0.24
LINC01001-201ENST00000526704 WDHD1O75717 1129 aaPredicted RBP13.53□□□□□ -0.24
LINC01001-201ENST00000526704 SLC3A2P08195 630 aaKnown RBP13.53□□□□□ -0.24
LINC01001-201ENST00000526704 GSDMDP57764 484 aa13.53□□□□□ -0.24
LINC01001-201ENST00000526704 NLRP12P59046 1061 aa13.53□□□□□ -0.24
LINC01001-201ENST00000526704 SYNE3Q6ZMZ3 975 aa13.53□□□□□ -0.24
LINC01001-201ENST00000526704 ZNF592Q92610 1267 aa13.53□□□□□ -0.24
LINC01001-201ENST00000526704 XPO4Q9C0E2 1151 aaKnown RBP13.53□□□□□ -0.24
LINC01001-201ENST00000526704 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.53□□□□□ -0.242e-6■■■■□ 21.3
LINC01001-201ENST00000526704 GREM2Q9H772 168 aa13.53□□□□□ -0.24
LINC01001-201ENST00000526704 BIN1O00499 593 aa13.53□□□□□ -0.24
LINC01001-201ENST00000526704 SH2B2O14492 632 aaPredicted RBP13.53□□□□□ -0.24
LINC01001-201ENST00000526704 CMA1P23946 247 aa13.53□□□□□ -0.24
LINC01001-201ENST00000526704 NCAPHQ15003 741 aa13.53□□□□□ -0.24
LINC01001-201ENST00000526704 PTPN14Q15678 1187 aa13.53□□□□□ -0.24
LINC01001-201ENST00000526704 VGLL2Q8N8G2 317 aa13.53□□□□□ -0.24
LINC01001-201ENST00000526704 RGS22Q8NE09 1264 aa13.53□□□□□ -0.24
LINC01001-201ENST00000526704 PIH1D3Q9NQM4 214 aaKnown RBP13.53□□□□□ -0.24
LINC01001-201ENST00000526704 TMOD3Q9NYL9 352 aa13.53□□□□□ -0.24
LINC01001-201ENST00000526704 IMPACTQ9P2X3 320 aa13.53□□□□□ -0.24
LINC01001-201ENST00000526704 ANGEL1Q9UNK9 670 aaKnown RBP13.53□□□□□ -0.24
LINC01001-201ENST00000526704 MAP3K15Q6ZN16 1313 aa13.53□□□□□ -0.24
LINC01001-201ENST00000526704 MYH6P13533 1939 aa13.52□□□□□ -0.24
LINC01001-201ENST00000526704 ZSCAN20P17040 1043 aaPredicted RBP13.52□□□□□ -0.24
LINC01001-201ENST00000526704 ITGA6P23229 1130 aa13.52□□□□□ -0.24
LINC01001-201ENST00000526704 BCORQ6W2J9 1755 aa13.52□□□□□ -0.25
LINC01001-201ENST00000526704 SPDYE4A6NLX3 237 aa13.52□□□□□ -0.25
LINC01001-201ENST00000526704 SLC39A14Q15043 492 aa13.52□□□□□ -0.25
LINC01001-201ENST00000526704 ZRSR1Q15695 479 aaKnown RBP13.52□□□□□ -0.25
LINC01001-201ENST00000526704 SLC9C2Q5TAH2 1124 aa13.52□□□□□ -0.25
LINC01001-201ENST00000526704 TTLL11Q8NHH1 800 aa13.52□□□□□ -0.25
LINC01001-201ENST00000526704 ZNF512BQ96KM6 892 aaPredicted RBP13.52□□□□□ -0.25
LINC01001-201ENST00000526704 SENP2Q9HC62 589 aa13.52□□□□□ -0.25
LINC01001-201ENST00000526704 TRMT1Q9NXH9 659 aaKnown RBP13.52□□□□□ -0.25
LINC01001-201ENST00000526704 IFNKQ9P0W0 207 aa13.52□□□□□ -0.25
LINC01001-201ENST00000526704 ASAP1Q9ULH1 1129 aa13.52□□□□□ -0.25
LINC01001-201ENST00000526704 SMC2O95347 1197 aa13.51□□□□□ -0.25
LINC01001-201ENST00000526704 RXRAP19793 462 aa13.51□□□□□ -0.25
LINC01001-201ENST00000526704 MARCKSP29966 332 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms