RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 IKBKEQ14164 716 aa4.52□□□□□ -1.69
TRAPPC4-207ENST00000526141 PKN1Q16512 942 aa4.52□□□□□ -1.69
TRAPPC4-207ENST00000526141 FBLN7Q53RD9 439 aa4.52□□□□□ -1.69
TRAPPC4-207ENST00000526141 NFXL1Q6ZNB6 911 aa4.52□□□□□ -1.69
TRAPPC4-207ENST00000526141 FBLIM1Q8WUP2 373 aa4.52□□□□□ -1.69
TRAPPC4-207ENST00000526141 BSNDQ8WZ55 320 aa4.52□□□□□ -1.69
TRAPPC4-207ENST00000526141 USP26Q9BXU7 913 aa4.52□□□□□ -1.69
TRAPPC4-207ENST00000526141 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
TRAPPC4-207ENST00000526141 PAK6Q9NQU5 681 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC4-207ENST00000526141 DZANK1Q9NVP4 752 aa4.52□□□□□ -1.69
TRAPPC4-207ENST00000526141 SOX13Q9UN79 622 aa4.52□□□□□ -1.69
TRAPPC4-207ENST00000526141 NOVA2Q9UNW9 492 aaKnown RBP4.52□□□□□ -1.69
TRAPPC4-207ENST00000526141 NFKBIEO00221 500 aa4.51□□□□□ -1.69
TRAPPC4-207ENST00000526141 FARP2O94887 1054 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC4-207ENST00000526141 PCSK2P16519 638 aa4.51□□□□□ -1.69
TRAPPC4-207ENST00000526141 OCLNQ16625 522 aa4.51□□□□□ -1.69
TRAPPC4-207ENST00000526141 FAM26DQ5JW98 314 aa4.51□□□□□ -1.69
TRAPPC4-207ENST00000526141 TTC16Q8NEE8 873 aa4.51□□□□□ -1.69
TRAPPC4-207ENST00000526141 EZH1Q92800 747 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC4-207ENST00000526141 SPATA32Q96LK8 384 aa4.51□□□□□ -1.69
TRAPPC4-207ENST00000526141 BCL2L13Q9BXK5 485 aa4.51□□□□□ -1.69
TRAPPC4-207ENST00000526141 SOX17Q9H6I2 414 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC4-207ENST00000526141 KANSL3Q9P2N6 904 aa4.51□□□□□ -1.69
TRAPPC4-207ENST00000526141 PRKAG2Q9UGJ0 569 aa4.51□□□□□ -1.69
TRAPPC4-207ENST00000526141 SLC5A6Q9Y289 635 aa4.51□□□□□ -1.69
TRAPPC4-207ENST00000526141 LOC100289279A0A1B0GTE1 492 aa4.5□□□□□ -1.69
TRAPPC4-207ENST00000526141 SOX1O00570 391 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC4-207ENST00000526141 VAMP1P23763 118 aa4.5□□□□□ -1.69
TRAPPC4-207ENST00000526141 SOX4Q06945 474 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC4-207ENST00000526141 ELOAQ14241 798 aaKnown RBP4.5□□□□□ -1.69
TRAPPC4-207ENST00000526141 MAP7Q14244 749 aa4.5□□□□□ -1.69
TRAPPC4-207ENST00000526141 NAA30Q147X3 362 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC4-207ENST00000526141 COL19A1Q14993 1142 aa4.5□□□□□ -1.69
TRAPPC4-207ENST00000526141 ZNF648Q5T619 568 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC4-207ENST00000526141 CDPF1Q6NVV7 123 aa4.5□□□□□ -1.69
TRAPPC4-207ENST00000526141 XKR5Q6UX68 686 aa4.5□□□□□ -1.69
TRAPPC4-207ENST00000526141 STK11IPQ8N1F8 1099 aa4.5□□□□□ -1.69
TRAPPC4-207ENST00000526141 TMEM102Q8N9M5 508 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC4-207ENST00000526141 NUDT16Q96DE0 195 aaKnown RBP4.5□□□□□ -1.69
TRAPPC4-207ENST00000526141 TMEM63CQ9P1W3 806 aa4.5□□□□□ -1.69
TRAPPC4-207ENST00000526141 CNTN3Q9P232 1028 aa4.5□□□□□ -1.69
TRAPPC4-207ENST00000526141 PAPLNO95428 1278 aa4.49□□□□□ -1.69
TRAPPC4-207ENST00000526141 DRD2P14416 443 aa4.49□□□□□ -1.69
TRAPPC4-207ENST00000526141 NCLP19338 710 aaKnown RBP4.49□□□□□ -1.69
TRAPPC4-207ENST00000526141 ADMP35318 185 aa4.49□□□□□ -1.69
TRAPPC4-207ENST00000526141 ZC3H6P61129 1189 aaKnown RBP4.49□□□□□ -1.69
TRAPPC4-207ENST00000526141 PLCL1Q15111 1095 aa4.49□□□□□ -1.69
TRAPPC4-207ENST00000526141 SHISA5Q8N114 240 aa4.49□□□□□ -1.69
TRAPPC4-207ENST00000526141 C2CD4AQ8NCU7 369 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC4-207ENST00000526141 SLC38A3Q99624 504 aa4.49□□□□□ -1.69
TRAPPC4-207ENST00000526141 LRRC4CQ9HCJ2 640 aa4.49□□□□□ -1.69
TRAPPC4-207ENST00000526141 CXXC1Q9P0U4 656 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC4-207ENST00000526141 ZC3H7BQ9UGR2 993 aaKnown RBP4.49□□□□□ -1.69
TRAPPC4-207ENST00000526141 FAM170BA6NMN3 283 aa4.48□□□□□ -1.69
TRAPPC4-207ENST00000526141 ZBTB39O15060 712 aa4.48□□□□□ -1.69
TRAPPC4-207ENST00000526141 SMARCA5O60264 1052 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC4-207ENST00000526141 SF3A1Q15459 793 aaKnown RBP4.48□□□□□ -1.69
TRAPPC4-207ENST00000526141 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
TRAPPC4-207ENST00000526141 CDCA8Q53HL2 280 aa4.48□□□□□ -1.69
TRAPPC4-207ENST00000526141 HP1BP3Q5SSJ5 553 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC4-207ENST00000526141 KSR1Q8IVT5 923 aa4.48□□□□□ -1.69
TRAPPC4-207ENST00000526141 C1orf127Q8N9H9 656 aa4.48□□□□□ -1.69
TRAPPC4-207ENST00000526141 GIPC2Q8TF65 315 aa4.48□□□□□ -1.69
TRAPPC4-207ENST00000526141 NXPE3Q969Y0 559 aa4.48□□□□□ -1.69
TRAPPC4-207ENST00000526141 MISP3Q96FF7 219 aa4.48□□□□□ -1.69
TRAPPC4-207ENST00000526141 MKNK1Q9BUB5 465 aa4.48□□□□□ -1.69
TRAPPC4-207ENST00000526141 ZFYVE1Q9HBF4 777 aa4.48□□□□□ -1.69
TRAPPC4-207ENST00000526141 ACPPP15309 386 aa4.47□□□□□ -1.69
TRAPPC4-207ENST00000526141 ZNF124Q15973 351 aa4.47□□□□□ -1.69
TRAPPC4-207ENST00000526141 ZNF326Q5BKZ1 582 aaKnown RBP4.47□□□□□ -1.69
TRAPPC4-207ENST00000526141 NOM1Q5C9Z4 860 aaKnown RBP4.47□□□□□ -1.69
TRAPPC4-207ENST00000526141 TMEM164Q5U3C3 297 aa4.47□□□□□ -1.69
TRAPPC4-207ENST00000526141 HGSNATQ68CP4 663 aa4.47□□□□□ -1.69
TRAPPC4-207ENST00000526141 PHLDB3Q6NSJ2 640 aa4.47□□□□□ -1.69
TRAPPC4-207ENST00000526141 VN1R5Q7Z5H4 357 aa4.47□□□□□ -1.69
TRAPPC4-207ENST00000526141 ATG4DQ86TL0 474 aaPredicted RBP4.47□□□□□ -1.69
TRAPPC4-207ENST00000526141 BCL7CQ8WUZ0 217 aaPredicted RBP4.47□□□□□ -1.69
TRAPPC4-207ENST00000526141 UBXN4Q92575 508 aa4.47□□□□□ -1.69
TRAPPC4-207ENST00000526141 OSMRQ99650 979 aa4.47□□□□□ -1.69
TRAPPC4-207ENST00000526141 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC4-207ENST00000526141 SOWAHDA6NJG2 315 aa4.46□□□□□ -1.7
TRAPPC4-207ENST00000526141 TRPA1O75762 1119 aa4.46□□□□□ -1.7
TRAPPC4-207ENST00000526141 DLGAP3O95886 979 aa4.46□□□□□ -1.7
TRAPPC4-207ENST00000526141 EDN3P14138 238 aa4.46□□□□□ -1.7
TRAPPC4-207ENST00000526141 GSTM4Q03013 218 aa4.46□□□□□ -1.7
TRAPPC4-207ENST00000526141 FAM69CQ0P6D2 419 aa4.46□□□□□ -1.7
TRAPPC4-207ENST00000526141 ZNF792Q3KQV3 632 aa4.46□□□□□ -1.7
TRAPPC4-207ENST00000526141 LCE4AQ5TA78 99 aa4.46□□□□□ -1.7
TRAPPC4-207ENST00000526141 SPOCD1Q6ZMY3 1216 aa4.46□□□□□ -1.7
TRAPPC4-207ENST00000526141 CAPN12Q6ZSI9 719 aa4.46□□□□□ -1.7
TRAPPC4-207ENST00000526141 ZNF765Q7L2R6 523 aa4.46□□□□□ -1.7
TRAPPC4-207ENST00000526141 ANKRD13AQ8IZ07 590 aa4.46□□□□□ -1.7
TRAPPC4-207ENST00000526141 TMEM40Q8WWA1 233 aa4.46□□□□□ -1.7
TRAPPC4-207ENST00000526141 GATA6Q92908 595 aa4.46□□□□□ -1.7
TRAPPC4-207ENST00000526141 HHIPQ96QV1 700 aa4.46□□□□□ -1.7
TRAPPC4-207ENST00000526141 POLR3GLQ9BT43 218 aa4.46□□□□□ -1.7
TRAPPC4-207ENST00000526141 CYP11A1P05108 521 aa4.45□□□□□ -1.7
TRAPPC4-207ENST00000526141 NFICP08651 508 aa4.45□□□□□ -1.7
TRAPPC4-207ENST00000526141 ESRRAP11474 423 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC4-207ENST00000526141 ADH5P11766 374 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms