RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 SPTY2D1Q68D10 685 aaPredicted RBP21.16■□□□□ 0.98
LMX1B-203ENST00000526117 TEKT1Q969V4 418 aa21.16■□□□□ 0.98
LMX1B-203ENST00000526117 ZDHHC15Q96MV8 337 aa21.16■□□□□ 0.98
LMX1B-203ENST00000526117 CCDC8Q9H0W5 538 aaPredicted RBP21.16■□□□□ 0.98
LMX1B-203ENST00000526117 IL1RAPL2Q9NP60 686 aa21.16■□□□□ 0.98
LMX1B-203ENST00000526117 LDHBP07195 334 aaKnown RBP21.15■□□□□ 0.98
LMX1B-203ENST00000526117 KRT26Q7Z3Y9 468 aa21.15■□□□□ 0.98
LMX1B-203ENST00000526117 APOBEC3FQ8IUX4 373 aaKnown RBP21.15■□□□□ 0.98
LMX1B-203ENST00000526117 SULF1Q8IWU6 871 aa21.15■□□□□ 0.98
LMX1B-203ENST00000526117 EXOC6Q8TAG9 804 aa21.15■□□□□ 0.98
LMX1B-203ENST00000526117 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.15■□□□□ 0.98
LMX1B-203ENST00000526117 TRPM7Q96QT4 1865 aa21.15■□□□□ 0.98
LMX1B-203ENST00000526117 CEP350Q5VT06 3117 aa21.15■□□□□ 0.98
LMX1B-203ENST00000526117 ASTN2O75129 1339 aaPredicted RBP21.14■□□□□ 0.97
LMX1B-203ENST00000526117 MYO1BO43795 1136 aa21.14■□□□□ 0.97
LMX1B-203ENST00000526117 PRDX5P30044 214 aa21.14■□□□□ 0.97
LMX1B-203ENST00000526117 GLIS2Q9BZE0 524 aaPredicted RBP21.14■□□□□ 0.97
LMX1B-203ENST00000526117 CREBZFQ9NS37 354 aa21.14■□□□□ 0.97
LMX1B-203ENST00000526117 IFIT2P09913 472 aaKnown RBP21.13■□□□□ 0.97
LMX1B-203ENST00000526117 GCC1Q96CN9 775 aa21.13■□□□□ 0.97
LMX1B-203ENST00000526117 FAM163AQ96GL9 167 aaPredicted RBP21.13■□□□□ 0.97
LMX1B-203ENST00000526117 PRMT6Q96LA8 375 aaPredicted RBP21.13■□□□□ 0.97
LMX1B-203ENST00000526117 SPDYE2Q495Y8 402 aa21.12■□□□□ 0.97
LMX1B-203ENST00000526117 TMED8Q6PL24 325 aaPredicted RBP21.12■□□□□ 0.97
LMX1B-203ENST00000526117 SLF2Q8IX21 1173 aa21.12■□□□□ 0.97
LMX1B-203ENST00000526117 PPP2R3BQ9Y5P8 575 aa21.12■□□□□ 0.97
LMX1B-203ENST00000526117 MAST2Q6P0Q8 1798 aa21.12■□□□□ 0.97
LMX1B-203ENST00000526117 GAKO14976 1311 aa21.11■□□□□ 0.97
LMX1B-203ENST00000526117 TMEM88BA6NKF7 163 aa21.11■□□□□ 0.97
LMX1B-203ENST00000526117 APBB1O00213 710 aa21.11■□□□□ 0.97
LMX1B-203ENST00000526117 PI16Q6UXB8 463 aa21.11■□□□□ 0.97
LMX1B-203ENST00000526117 USP48Q86UV5 1035 aa21.11■□□□□ 0.97
LMX1B-203ENST00000526117 PCDHAC2Q9Y5I4 1007 aa21.11■□□□□ 0.97
LMX1B-203ENST00000526117 TRAF5O00463 557 aa21.1■□□□□ 0.97
LMX1B-203ENST00000526117 RBM5P52756 815 aaKnown RBP eCLIP21.1■□□□□ 0.97
LMX1B-203ENST00000526117 FKBP1CQ5VVH2 108 aa21.1■□□□□ 0.97
LMX1B-203ENST00000526117 APOBEC3HQ6NTF7 200 aaKnown RBP21.1■□□□□ 0.97
LMX1B-203ENST00000526117 ERICH6Q7L0X2 663 aa21.1■□□□□ 0.97
LMX1B-203ENST00000526117 POLR2AP24928 1970 aaKnown RBP21.1■□□□□ 0.97
LMX1B-203ENST00000526117 ADM5C9JUS6 153 aa21.09■□□□□ 0.97
LMX1B-203ENST00000526117 CYP2E1P05181 493 aaPredicted RBP21.09■□□□□ 0.97
LMX1B-203ENST00000526117 ATP5JP18859 108 aa21.09■□□□□ 0.97
LMX1B-203ENST00000526117 TNFAIP1Q13829 316 aa21.09■□□□□ 0.97
LMX1B-203ENST00000526117 CST9Q5W186 159 aa21.09■□□□□ 0.97
LMX1B-203ENST00000526117 RWDD1Q9H446 243 aaPredicted RBP21.09■□□□□ 0.97
LMX1B-203ENST00000526117 ABCF2Q9UG63 623 aa21.09■□□□□ 0.97
LMX1B-203ENST00000526117 DOCK2Q92608 1830 aa21.08■□□□□ 0.97
LMX1B-203ENST00000526117 GSTO1P78417 241 aa21.08■□□□□ 0.97
LMX1B-203ENST00000526117 DZIP1Q86YF9 867 aaKnown RBP21.08■□□□□ 0.97
LMX1B-203ENST00000526117 SMC5Q8IY18 1101 aa21.08■□□□□ 0.97
LMX1B-203ENST00000526117 NSUN4Q96CB9 384 aaKnown RBP21.08■□□□□ 0.97
LMX1B-203ENST00000526117 ZNF70Q9UC06 446 aaPredicted RBP21.08■□□□□ 0.97
LMX1B-203ENST00000526117 DAGLAQ9Y4D2 1042 aa21.08■□□□□ 0.97
LMX1B-203ENST00000526117 AOX1Q06278 1338 aa21.07■□□□□ 0.96
LMX1B-203ENST00000526117 MAP4K4O95819 1239 aaPredicted RBP21.07■□□□□ 0.96
LMX1B-203ENST00000526117 ZAP70P43403 619 aa21.07■□□□□ 0.96
LMX1B-203ENST00000526117 MECOMQ03112 1051 aa21.07■□□□□ 0.96
LMX1B-203ENST00000526117 MROH7-TTC4A0A0A0MT08 1334 aa21.06■□□□□ 0.96
LMX1B-203ENST00000526117 MYH2Q9UKX2 1941 aa21.06■□□□□ 0.96
LMX1B-203ENST00000526117 CELF2O95319 508 aaKnown RBP21.06■□□□□ 0.96
LMX1B-203ENST00000526117 TTF1Q15361 905 aaPredicted RBP21.06■□□□□ 0.96
LMX1B-203ENST00000526117 DIXDC1Q155Q3 683 aa21.06■□□□□ 0.96
LMX1B-203ENST00000526117 ZNF384Q8TF68 577 aa21.06■□□□□ 0.96
LMX1B-203ENST00000526117 CDCA5Q96FF9 252 aa21.06■□□□□ 0.96
LMX1B-203ENST00000526117 HHIPL1Q96JK4 782 aa21.06■□□□□ 0.96
LMX1B-203ENST00000526117 TDRD3Q9H7E2 651 aaKnown RBP21.06■□□□□ 0.96
LMX1B-203ENST00000526117 SMARCA5O60264 1052 aaPredicted RBP21.05■□□□□ 0.96
LMX1B-203ENST00000526117 LDHCP07864 332 aa21.05■□□□□ 0.96
LMX1B-203ENST00000526117 FKBP1BP68106 108 aa21.05■□□□□ 0.96
LMX1B-203ENST00000526117 FMR1Q06787 632 aaKnown RBP eCLIP21.05■□□□□ 0.96
LMX1B-203ENST00000526117 TBC1D9Q6ZT07 1266 aa21.05■□□□□ 0.96
LMX1B-203ENST00000526117 FAM83AQ86UY5 434 aa21.05■□□□□ 0.96
LMX1B-203ENST00000526117 DEFB129Q9H1M3 183 aa21.05■□□□□ 0.96
LMX1B-203ENST00000526117 SNRKQ9NRH2 765 aa21.05■□□□□ 0.96
LMX1B-203ENST00000526117 LRP2BPQ9P2M1 347 aa21.05■□□□□ 0.96
LMX1B-203ENST00000526117 TLL2Q9Y6L7 1015 aa21.05■□□□□ 0.96
LMX1B-203ENST00000526117 RPAP1Q9BWH6 1393 aaPredicted RBP21.05■□□□□ 0.96
LMX1B-203ENST00000526117 PAPPA2Q9BXP8 1791 aa21.05■□□□□ 0.96
LMX1B-203ENST00000526117 GPR75-ASB3A0A0A6YYF3 556 aa21.04■□□□□ 0.96
LMX1B-203ENST00000526117 CLRN2A0PK11 232 aa21.04■□□□□ 0.96
LMX1B-203ENST00000526117 RASSF10A6NK89 507 aa21.04■□□□□ 0.96
LMX1B-203ENST00000526117 TNNI2P48788 182 aa21.04■□□□□ 0.96
LMX1B-203ENST00000526117 DNAJC5GQ8N7S2 189 aa21.04■□□□□ 0.96
LMX1B-203ENST00000526117 GPATCH3Q96I76 525 aa21.04■□□□□ 0.96
LMX1B-203ENST00000526117 ECHDC1Q9NTX5 307 aa21.04■□□□□ 0.96
LMX1B-203ENST00000526117 TMOD2Q9NZR1 351 aa21.04■□□□□ 0.96
LMX1B-203ENST00000526117 RFX7Q2KHR2 1363 aa21.04■□□□□ 0.96
LMX1B-203ENST00000526117 TTC41PQ6P2S7 1318 aa21.04■□□□□ 0.96
LMX1B-203ENST00000526117 HAUS7Q99871 368 aa21.03■□□□□ 0.96
LMX1B-203ENST00000526117 PIH1D3Q9NQM4 214 aaKnown RBP21.03■□□□□ 0.96
LMX1B-203ENST00000526117 RAI14Q9P0K7 980 aa21.03■□□□□ 0.96
LMX1B-203ENST00000526117 SALL3Q9BXA9 1300 aa21.03■□□□□ 0.96
LMX1B-203ENST00000526117 CNTNAP1P78357 1384 aa21.02■□□□□ 0.96
LMX1B-203ENST00000526117 CDC42EP5Q6NZY7 148 aa21.02■□□□□ 0.96
LMX1B-203ENST00000526117 SAPCD2Q86UD0 394 aa21.02■□□□□ 0.96
LMX1B-203ENST00000526117 VEZTQ9HBM0 779 aa21.02■□□□□ 0.96
LMX1B-203ENST00000526117 GBA2Q9HCG7 927 aaPredicted RBP21.02■□□□□ 0.96
LMX1B-203ENST00000526117 NPM3O75607 178 aaKnown RBP21.01■□□□□ 0.95
LMX1B-203ENST00000526117 IGHDP01880 384 aa21.01■□□□□ 0.95
LMX1B-203ENST00000526117 NF2P35240 595 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms