RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 PRKRIP1Q9H875 184 aaPredicted RBP15.93■□□□□ 0.14
CCDC90B-205ENST00000525916 CHMP3Q9Y3E7 222 aa15.93■□□□□ 0.14
CCDC90B-205ENST00000525916 PLIN1O60240 522 aa15.92■□□□□ 0.14
CCDC90B-205ENST00000525916 ECM2O94769 699 aaPredicted RBP15.92■□□□□ 0.14
CCDC90B-205ENST00000525916 SLC4A2P04920 1241 aa15.92■□□□□ 0.14
CCDC90B-205ENST00000525916 MAP3K9P80192 1104 aa15.92■□□□□ 0.14
CCDC90B-205ENST00000525916 FLIIQ13045 1269 aa15.92■□□□□ 0.14
CCDC90B-205ENST00000525916 IFIT5Q13325 482 aaKnown RBP15.92■□□□□ 0.14
CCDC90B-205ENST00000525916 TWISTNBQ3B726 338 aaPredicted RBP15.92■□□□□ 0.14
CCDC90B-205ENST00000525916 MFSD14BQ5SR56 506 aa15.92■□□□□ 0.14
CCDC90B-205ENST00000525916 SHISA4Q96DD7 197 aa15.92■□□□□ 0.14
CCDC90B-205ENST00000525916 TTF2Q9UNY4 1162 aaKnown RBP15.92■□□□□ 0.14
CCDC90B-205ENST00000525916 CSADQ9Y600 493 aa15.92■□□□□ 0.14
CCDC90B-205ENST00000525916 RANBP2P49792 3224 aaKnown RBP15.92■□□□□ 0.14
CCDC90B-205ENST00000525916 FAM205AQ6ZU69 1335 aa15.92■□□□□ 0.14
CCDC90B-205ENST00000525916 TLR2O60603 784 aa15.91■□□□□ 0.14
CCDC90B-205ENST00000525916 LACTBP83111 547 aaPredicted RBP15.91■□□□□ 0.14
CCDC90B-205ENST00000525916 FOXO4P98177 505 aa15.91■□□□□ 0.14
CCDC90B-205ENST00000525916 FKBP5Q13451 457 aaPredicted RBP15.91■□□□□ 0.14
CCDC90B-205ENST00000525916 DZIP1LQ8IYY4 767 aaKnown RBP15.91■□□□□ 0.14
CCDC90B-205ENST00000525916 LINS1Q8NG48 757 aa15.91■□□□□ 0.14
CCDC90B-205ENST00000525916 DNAAF4Q8WXU2 420 aa15.91■□□□□ 0.14
CCDC90B-205ENST00000525916 ZNF594Q96JF6 807 aaPredicted RBP15.91■□□□□ 0.14
CCDC90B-205ENST00000525916 RBM27Q9P2N5 1060 aaKnown RBP15.91■□□□□ 0.14
CCDC90B-205ENST00000525916 SERPINA10Q9UK55 444 aa15.91■□□□□ 0.14
CCDC90B-205ENST00000525916 SPDYE5A6NIY4 337 aa15.9■□□□□ 0.14
CCDC90B-205ENST00000525916 KIF22Q14807 665 aa15.9■□□□□ 0.14
CCDC90B-205ENST00000525916 MTFR1Q15390 333 aa15.9■□□□□ 0.14
CCDC90B-205ENST00000525916 SNCAIPQ9Y6H5 919 aa15.9■□□□□ 0.14
CCDC90B-205ENST00000525916 ALPK3Q96L96 1907 aa15.9■□□□□ 0.14
CCDC90B-205ENST00000525916 BTBD19C9JJ37 291 aa15.89■□□□□ 0.13
CCDC90B-205ENST00000525916 CRKP46108 304 aa15.89■□□□□ 0.13
CCDC90B-205ENST00000525916 TDRD7Q8NHU6 1098 aaKnown RBP15.89■□□□□ 0.13
CCDC90B-205ENST00000525916 DPF3Q92784 378 aa15.89■□□□□ 0.13
CCDC90B-205ENST00000525916 COL6A3P12111 3177 aa15.89■□□□□ 0.13
CCDC90B-205ENST00000525916 WDHD1O75717 1129 aaPredicted RBP15.88■□□□□ 0.13
CCDC90B-205ENST00000525916 CETPP11597 493 aa15.88■□□□□ 0.13
CCDC90B-205ENST00000525916 CTGFP29279 349 aa15.88■□□□□ 0.13
CCDC90B-205ENST00000525916 GYG1P46976 350 aa15.88■□□□□ 0.13
CCDC90B-205ENST00000525916 TNNI2P48788 182 aa15.88■□□□□ 0.13
CCDC90B-205ENST00000525916 EPHA10Q5JZY3 1008 aa15.88■□□□□ 0.13
CCDC90B-205ENST00000525916 LMBR1LQ6UX01 489 aa15.88■□□□□ 0.13
CCDC90B-205ENST00000525916 LDHAL6AQ6ZMR3 332 aa15.88■□□□□ 0.13
CCDC90B-205ENST00000525916 IRF6O14896 467 aa15.87■□□□□ 0.13
CCDC90B-205ENST00000525916 CACNB3P54284 484 aa15.87■□□□□ 0.13
CCDC90B-205ENST00000525916 GRIK5Q16478 980 aa15.87■□□□□ 0.13
CCDC90B-205ENST00000525916 TAF7LQ5H9L4 462 aa15.87■□□□□ 0.13
CCDC90B-205ENST00000525916 ERO1BQ86YB8 467 aa15.87■□□□□ 0.13
CCDC90B-205ENST00000525916 WRNIP1Q96S55 665 aa15.87■□□□□ 0.13
CCDC90B-205ENST00000525916 ZCCHC17Q9NP64 241 aaKnown RBP15.87■□□□□ 0.13
CCDC90B-205ENST00000525916 CNNM1Q9NRU3 951 aa15.87■□□□□ 0.13
CCDC90B-205ENST00000525916 DOCK3Q8IZD9 2030 aa15.86■□□□□ 0.13
CCDC90B-205ENST00000525916 GNRH1P01148 92 aa15.86■□□□□ 0.13
CCDC90B-205ENST00000525916 HIBADHP31937 336 aaKnown RBP15.86■□□□□ 0.13
CCDC90B-205ENST00000525916 PRMT2P55345 433 aa15.86■□□□□ 0.13
CCDC90B-205ENST00000525916 SNAPC2Q13487 334 aa15.86■□□□□ 0.13
CCDC90B-205ENST00000525916 CCDC57Q2TAC2 916 aa15.86■□□□□ 0.13
CCDC90B-205ENST00000525916 ZKSCAN4Q969J2 545 aaPredicted RBP15.86■□□□□ 0.13
CCDC90B-205ENST00000525916 PTPRFP10586 1907 aa15.86■□□□□ 0.13
CCDC90B-205ENST00000525916 F6X3S4 739 aa15.85■□□□□ 0.13
CCDC90B-205ENST00000525916 FAM84BQ96KN1 310 aaPredicted RBP15.85■□□□□ 0.13
CCDC90B-205ENST00000525916 TRIM47Q96LD4 638 aa15.85■□□□□ 0.13
CCDC90B-205ENST00000525916 SRRDQ9UH36 339 aa15.85■□□□□ 0.13
CCDC90B-205ENST00000525916 CPA4Q9UI42 421 aa15.85■□□□□ 0.13
CCDC90B-205ENST00000525916 IQSEC3Q9UPP2 1182 aaPredicted RBP15.85■□□□□ 0.13
CCDC90B-205ENST00000525916 ANP32CO43423 234 aa15.84■□□□□ 0.13
CCDC90B-205ENST00000525916 OSBPP22059 807 aa15.84■□□□□ 0.13
CCDC90B-205ENST00000525916 PSMC4P43686 418 aa15.84■□□□□ 0.13
CCDC90B-205ENST00000525916 PPIL2Q13356 520 aa15.84■□□□□ 0.13
CCDC90B-205ENST00000525916 UBE4AQ14139 1066 aa15.84■□□□□ 0.13
CCDC90B-205ENST00000525916 C17orf99Q6UX52 265 aa15.84■□□□□ 0.13
CCDC90B-205ENST00000525916 PRO3102Q9H379 93 aa15.84■□□□□ 0.13
CCDC90B-205ENST00000525916 DOCK2Q92608 1830 aa15.84■□□□□ 0.13
CCDC90B-205ENST00000525916 DLL1O00548 723 aa15.83■□□□□ 0.12
CCDC90B-205ENST00000525916 GRK4P32298 578 aa15.83■□□□□ 0.12
CCDC90B-205ENST00000525916 CHAF1AQ13111 956 aaPredicted RBP15.83■□□□□ 0.12
CCDC90B-205ENST00000525916 BEND3Q5T5X7 828 aa15.83■□□□□ 0.12
CCDC90B-205ENST00000525916 UBE2Q1Q7Z7E8 422 aa15.83■□□□□ 0.12
CCDC90B-205ENST00000525916 RAET1EQ8TD07 263 aa15.83■□□□□ 0.12
CCDC90B-205ENST00000525916 PUS3Q9BZE2 481 aaKnown RBP15.83■□□□□ 0.12
CCDC90B-205ENST00000525916 RIPOR2Q9Y4F9 1068 aa15.83■□□□□ 0.12
CCDC90B-205ENST00000525916 CCL5P13501 91 aa15.82■□□□□ 0.12
CCDC90B-205ENST00000525916 GJA8P48165 433 aa15.82■□□□□ 0.12
CCDC90B-205ENST00000525916 WWC1Q8IX03 1113 aa15.82■□□□□ 0.12
CCDC90B-205ENST00000525916 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.82■□□□□ 0.12
CCDC90B-205ENST00000525916 SLC17A8Q8NDX2 589 aa15.82■□□□□ 0.12
CCDC90B-205ENST00000525916 NKX2-3Q8TAU0 364 aa15.82■□□□□ 0.12
CCDC90B-205ENST00000525916 HTATIP2Q9BUP3 242 aa15.82■□□□□ 0.12
CCDC90B-205ENST00000525916 MYPNQ86TC9 1320 aa15.82■□□□□ 0.12
CCDC90B-205ENST00000525916 ADGRA2Q96PE1 1338 aa15.82■□□□□ 0.12
CCDC90B-205ENST00000525916 GRM8O00222 908 aa15.81■□□□□ 0.12
CCDC90B-205ENST00000525916 PDHXO00330 501 aa15.81■□□□□ 0.12
CCDC90B-205ENST00000525916 FMNL1O95466 1100 aaPredicted RBP15.81■□□□□ 0.12
CCDC90B-205ENST00000525916 GJB1P08034 283 aa15.81■□□□□ 0.12
CCDC90B-205ENST00000525916 INPP5BP32019 993 aa15.81■□□□□ 0.12
CCDC90B-205ENST00000525916 LAMA3Q16787 3333 aa15.81■□□□□ 0.12
CCDC90B-205ENST00000525916 TEKT1Q969V4 418 aa15.81■□□□□ 0.12
CCDC90B-205ENST00000525916 RPAP1Q9BWH6 1393 aaPredicted RBP15.81■□□□□ 0.12
CCDC90B-205ENST00000525916 RNF208Q9H0X6 261 aa15.81■□□□□ 0.12
CCDC90B-205ENST00000525916 TMOD2Q9NZR1 351 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms