RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 RCAN3Q9UKA8 241 aa13.02□□□□□ -0.33
RBBP4-216ENST00000525506 ANGEL1Q9UNK9 670 aaKnown RBP13.02□□□□□ -0.33
RBBP4-216ENST00000525506 SSC5DA1L4H1 1573 aa13.02□□□□□ -0.33
RBBP4-216ENST00000525506 MYO1BO43795 1136 aa13.01□□□□□ -0.33
RBBP4-216ENST00000525506 SLC5A1P13866 664 aa13.01□□□□□ -0.33
RBBP4-216ENST00000525506 CRKP46108 304 aa13.01□□□□□ -0.33
RBBP4-216ENST00000525506 NBPF12Q5TAG4 269 aaPredicted RBP13.01□□□□□ -0.33
RBBP4-216ENST00000525506 ARMC9Q7Z3E5 817 aa13.01□□□□□ -0.33
RBBP4-216ENST00000525506 CLUAP1Q96AJ1 413 aa13.01□□□□□ -0.33
RBBP4-216ENST00000525506 COPRSQ9NQ92 184 aa13.01□□□□□ -0.33
RBBP4-216ENST00000525506 OTOFQ9HC10 1997 aa13□□□□□ -0.33
RBBP4-216ENST00000525506 COL1A1P02452 1464 aaPredicted RBP13□□□□□ -0.33
RBBP4-216ENST00000525506 RASA3Q14644 834 aa13□□□□□ -0.33
RBBP4-216ENST00000525506 SPDYE2Q495Y8 402 aa13□□□□□ -0.33
RBBP4-216ENST00000525506 CDAN1Q8IWY9 1227 aa13□□□□□ -0.33
RBBP4-216ENST00000525506 ABHD8Q96I13 439 aa13□□□□□ -0.33
RBBP4-216ENST00000525506 CLMNQ96JQ2 1002 aa13□□□□□ -0.33
RBBP4-216ENST00000525506 SERPINA10Q9UK55 444 aa13□□□□□ -0.33
RBBP4-216ENST00000525506 AK9Q5TCS8 1911 aa13□□□□□ -0.33
RBBP4-216ENST00000525506 TCP10L2B9ZVM9 353 aa12.99□□□□□ -0.33
RBBP4-216ENST00000525506 ZBTB22O15209 634 aa12.99□□□□□ -0.33
RBBP4-216ENST00000525506 LDLRAD1Q5T700 205 aa12.99□□□□□ -0.33
RBBP4-216ENST00000525506 LPIN2Q92539 896 aa12.99□□□□□ -0.33
RBBP4-216ENST00000525506 CEP126Q9P2H0 1117 aa12.99□□□□□ -0.33
RBBP4-216ENST00000525506 ZBTB7BO15156 539 aaPredicted RBP12.98□□□□□ -0.33
RBBP4-216ENST00000525506 SRGAP3O43295 1099 aa12.98□□□□□ -0.33
RBBP4-216ENST00000525506 RLBP1P12271 317 aa12.98□□□□□ -0.33
RBBP4-216ENST00000525506 ADORA1P30542 326 aa12.98□□□□□ -0.33
RBBP4-216ENST00000525506 IL15P40933 162 aaPredicted RBP12.98□□□□□ -0.33
RBBP4-216ENST00000525506 CACNB3P54284 484 aa12.98□□□□□ -0.33
RBBP4-216ENST00000525506 ATP2B3Q16720 1220 aa12.98□□□□□ -0.33
RBBP4-216ENST00000525506 ITPRIPQ8IWB1 547 aa12.98□□□□□ -0.33
RBBP4-216ENST00000525506 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.98□□□□□ -0.33
RBBP4-216ENST00000525506 TBC1D22AQ8WUA7 517 aa12.98□□□□□ -0.33
RBBP4-216ENST00000525506 CHMP4BQ9H444 224 aaKnown RBP12.98□□□□□ -0.33
RBBP4-216ENST00000525506 SAGE1Q9NXZ1 904 aa12.98□□□□□ -0.33
RBBP4-216ENST00000525506 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.98□□□□□ -0.33
RBBP4-216ENST00000525506 MYH2Q9UKX2 1941 aa12.98□□□□□ -0.33
RBBP4-216ENST00000525506 USP2O75604 605 aaPredicted RBP12.97□□□□□ -0.33
RBBP4-216ENST00000525506 TBC1D8O95759 1140 aa12.97□□□□□ -0.33
RBBP4-216ENST00000525506 PHKA1P46020 1223 aa12.97□□□□□ -0.33
RBBP4-216ENST00000525506 DGKZQ13574 1117 aa12.97□□□□□ -0.33
RBBP4-216ENST00000525506 PDE3AQ14432 1141 aa12.97□□□□□ -0.33
RBBP4-216ENST00000525506 SUPT20HL1Q3ZLR7 823 aa12.97□□□□□ -0.33
RBBP4-216ENST00000525506 SLC10A4Q96EP9 437 aa12.97□□□□□ -0.33
RBBP4-216ENST00000525506 MCOLN1Q9GZU1 580 aa12.97□□□□□ -0.33
RBBP4-216ENST00000525506 TMEM39BQ9GZU3 492 aa12.97□□□□□ -0.33
RBBP4-216ENST00000525506 PPP2R3BQ9Y5P8 575 aa12.97□□□□□ -0.33
RBBP4-216ENST00000525506 PPP1R12BO60237 982 aaPredicted RBP12.96□□□□□ -0.33
RBBP4-216ENST00000525506 TIMM10P62072 90 aa12.96□□□□□ -0.33
RBBP4-216ENST00000525506 MAP3K11Q16584 847 aa12.96□□□□□ -0.33
RBBP4-216ENST00000525506 SPRYD7Q5W111 196 aa12.96□□□□□ -0.33
RBBP4-216ENST00000525506 TEKT1Q969V4 418 aa12.96□□□□□ -0.33
RBBP4-216ENST00000525506 TEPSINQ96N21 525 aa12.96□□□□□ -0.33
RBBP4-216ENST00000525506 DDX19BQ9UMR2 479 aa12.96□□□□□ -0.33
RBBP4-216ENST00000525506 CCDC85CA6NKD9 419 aa12.95□□□□□ -0.34
RBBP4-216ENST00000525506 GJA5P36382 358 aa12.95□□□□□ -0.34
RBBP4-216ENST00000525506 TM4SF4P48230 202 aa12.95□□□□□ -0.34
RBBP4-216ENST00000525506 HDLBPQ00341 1268 aaKnown RBP12.95□□□□□ -0.34
RBBP4-216ENST00000525506 TFCP2Q12800 502 aa12.95□□□□□ -0.34
RBBP4-216ENST00000525506 TNFAIP1Q13829 316 aa12.95□□□□□ -0.34
RBBP4-216ENST00000525506 MVPQ14764 893 aaKnown RBP12.95□□□□□ -0.34
RBBP4-216ENST00000525506 APOBEC3HQ6NTF7 200 aaKnown RBP12.95□□□□□ -0.34
RBBP4-216ENST00000525506 REM2Q8IYK8 340 aaPredicted RBP12.95□□□□□ -0.34
RBBP4-216ENST00000525506 WDR66Q8TBY9 1149 aa12.95□□□□□ -0.34
RBBP4-216ENST00000525506 SSH3Q8TE77 659 aa12.95□□□□□ -0.34
RBBP4-216ENST00000525506 WNK4Q96J92 1243 aa12.95□□□□□ -0.34
RBBP4-216ENST00000525506 ZDHHC15Q96MV8 337 aa12.95□□□□□ -0.34
RBBP4-216ENST00000525506 R3HDMLQ9H3Y0 253 aa12.95□□□□□ -0.34
RBBP4-216ENST00000525506 LAMB1P07942 1786 aa12.94□□□□□ -0.34
RBBP4-216ENST00000525506 PNMA6EA0A0J9YXQ4 647 aa12.94□□□□□ -0.34
RBBP4-216ENST00000525506 PRDX5P30044 214 aa12.94□□□□□ -0.34
RBBP4-216ENST00000525506 IREB2P48200 963 aaKnown RBP12.94□□□□□ -0.34
RBBP4-216ENST00000525506 POLA2Q14181 598 aa12.94□□□□□ -0.34
RBBP4-216ENST00000525506 DIXDC1Q155Q3 683 aa12.94□□□□□ -0.34
RBBP4-216ENST00000525506 CCDC102BQ68D86 513 aa12.94□□□□□ -0.34
RBBP4-216ENST00000525506 PANK1Q8TE04 598 aa12.94□□□□□ -0.34
RBBP4-216ENST00000525506 A0A1B0GUL7 405 aa12.93□□□□□ -0.34
RBBP4-216ENST00000525506 TNNI2P48788 182 aa12.93□□□□□ -0.34
RBBP4-216ENST00000525506 ATP8B2P98198 1209 aa12.93□□□□□ -0.34
RBBP4-216ENST00000525506 HHIPL2Q6UWX4 724 aa12.93□□□□□ -0.34
RBBP4-216ENST00000525506 CNKSR2Q8WXI2 1034 aa12.93□□□□□ -0.34
RBBP4-216ENST00000525506 XAGE2Q96GT9 111 aa12.93□□□□□ -0.34
RBBP4-216ENST00000525506 MRIQ9BWK5 157 aa12.93□□□□□ -0.34
RBBP4-216ENST00000525506 C1orf115Q9H7X2 142 aa12.93□□□□□ -0.34
RBBP4-216ENST00000525506 ELP3Q9H9T3 547 aa12.93□□□□□ -0.34
RBBP4-216ENST00000525506 GNL3LQ9NVN8 582 aaKnown RBP12.93□□□□□ -0.34
RBBP4-216ENST00000525506 AKAP2Q9Y2D5 859 aa12.93□□□□□ -0.34
RBBP4-216ENST00000525506 SUGT1Q9Y2Z0 365 aa12.93□□□□□ -0.34
RBBP4-216ENST00000525506 DAGLAQ9Y4D2 1042 aa12.93□□□□□ -0.34
RBBP4-216ENST00000525506 MAST3O60307 1309 aa12.92□□□□□ -0.34
RBBP4-216ENST00000525506 SEMA3EO15041 775 aa12.92□□□□□ -0.34
RBBP4-216ENST00000525506 LDHBP07195 334 aaKnown RBP12.92□□□□□ -0.34
RBBP4-216ENST00000525506 SREBF2Q12772 1141 aa12.92□□□□□ -0.34
RBBP4-216ENST00000525506 ANKRD13AQ8IZ07 590 aa12.92□□□□□ -0.34
RBBP4-216ENST00000525506 NEUROD6Q96NK8 337 aa12.92□□□□□ -0.34
RBBP4-216ENST00000525506 TMOD2Q9NZR1 351 aa12.92□□□□□ -0.34
RBBP4-216ENST00000525506 DENND2AQ9ULE3 1009 aa12.92□□□□□ -0.34
RBBP4-216ENST00000525506 NOP58Q9Y2X3 529 aaKnown RBP12.92□□□□□ -0.34
RBBP4-216ENST00000525506 PDS5AQ29RF7 1337 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms