RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 SPINK5Q9NQ38 1064 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC4-206ENST00000525303 ZNF70Q9UC06 446 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC4-206ENST00000525303 SERPINA10Q9UK55 444 aa12.1□□□□□ -0.47
TRAPPC4-206ENST00000525303 PTPN22Q9Y2R2 807 aa12.1□□□□□ -0.47
TRAPPC4-206ENST00000525303 CEP290O15078 2479 aa12.1□□□□□ -0.47
TRAPPC4-206ENST00000525303 MGAMO43451 1857 aa12.09□□□□□ -0.47
TRAPPC4-206ENST00000525303 TESPA1A2RU30 521 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC4-206ENST00000525303 HIBADHP31937 336 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-206ENST00000525303 UBE4AQ14139 1066 aa12.09□□□□□ -0.47
TRAPPC4-206ENST00000525303 INTS3Q68E01 1043 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-206ENST00000525303 SLC4A10Q6U841 1118 aa12.09□□□□□ -0.47
TRAPPC4-206ENST00000525303 CDAN1Q8IWY9 1227 aa12.09□□□□□ -0.47
TRAPPC4-206ENST00000525303 DZIP1LQ8IYY4 767 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-206ENST00000525303 FAM84BQ96KN1 310 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC4-206ENST00000525303 TEPSINQ96N21 525 aa12.09□□□□□ -0.47
TRAPPC4-206ENST00000525303 PUS3Q9BZE2 481 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-206ENST00000525303 TMEM39BQ9GZU3 492 aa12.09□□□□□ -0.47
TRAPPC4-206ENST00000525303 TCP10L2B9ZVM9 353 aa12.08□□□□□ -0.48
TRAPPC4-206ENST00000525303 ALDH1L1O75891 902 aa12.08□□□□□ -0.48
TRAPPC4-206ENST00000525303 CRKP46108 304 aa12.08□□□□□ -0.48
TRAPPC4-206ENST00000525303 CAP1Q01518 475 aa12.08□□□□□ -0.48
TRAPPC4-206ENST00000525303 SP3Q02447 781 aa12.08□□□□□ -0.48
TRAPPC4-206ENST00000525303 GRIK5Q16478 980 aa12.08□□□□□ -0.48
TRAPPC4-206ENST00000525303 CNKSR2Q8WXI2 1034 aa12.08□□□□□ -0.48
TRAPPC4-206ENST00000525303 KAZALD1Q96I82 304 aa12.08□□□□□ -0.48
TRAPPC4-206ENST00000525303 SUCLG2Q96I99 432 aa12.08□□□□□ -0.48
TRAPPC4-206ENST00000525303 SRCIN1Q9C0H9 1055 aa12.08□□□□□ -0.48
TRAPPC4-206ENST00000525303 EFCC1Q9HA90 598 aa12.08□□□□□ -0.48
TRAPPC4-206ENST00000525303 TNNI2P48788 182 aa12.07□□□□□ -0.48
TRAPPC4-206ENST00000525303 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC4-206ENST00000525303 MS4A4AQ96JQ5 239 aa12.07□□□□□ -0.48
TRAPPC4-206ENST00000525303 IQSEC3Q9UPP2 1182 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC4-206ENST00000525303 MYH2Q9UKX2 1941 aa12.07□□□□□ -0.48
TRAPPC4-206ENST00000525303 MROH5Q6ZUA9 1318 aa12.07□□□□□ -0.48
TRAPPC4-206ENST00000525303 CCL15-CCL14A0A0B4J2E2 113 aa12.06□□□□□ -0.48
TRAPPC4-206ENST00000525303 NBPF7P0C2Y1 421 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC4-206ENST00000525303 MAP3K9P80192 1104 aa12.06□□□□□ -0.48
TRAPPC4-206ENST00000525303 VGLL4Q14135 290 aa12.06□□□□□ -0.48
TRAPPC4-206ENST00000525303 TAF1CQ15572 869 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC4-206ENST00000525303 CCL15Q16663 113 aa12.06□□□□□ -0.48
TRAPPC4-206ENST00000525303 PPP4R3CPQ6ZMV5 832 aa12.06□□□□□ -0.48
TRAPPC4-206ENST00000525303 VPS37DQ86XT2 251 aa12.06□□□□□ -0.48
TRAPPC4-206ENST00000525303 BRI3BPQ8WY22 251 aa12.06□□□□□ -0.48
TRAPPC4-206ENST00000525303 ARMC5Q96C12 935 aa12.06□□□□□ -0.48
TRAPPC4-206ENST00000525303 GCC1Q96CN9 775 aa12.06□□□□□ -0.48
TRAPPC4-206ENST00000525303 OTUD5Q96G74 571 aa12.06□□□□□ -0.48
TRAPPC4-206ENST00000525303 RIPOR2Q9Y4F9 1068 aa12.06□□□□□ -0.48
TRAPPC4-206ENST00000525303 DOCK2Q92608 1830 aa12.06□□□□□ -0.48
TRAPPC4-206ENST00000525303 CACNB3P54284 484 aa12.05□□□□□ -0.48
TRAPPC4-206ENST00000525303 CHAF1AQ13111 956 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC4-206ENST00000525303 FBXO33Q7Z6M2 555 aa12.05□□□□□ -0.48
TRAPPC4-206ENST00000525303 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.05□□□□□ -0.48
TRAPPC4-206ENST00000525303 BICC1Q9H694 974 aaKnown RBP12.05□□□□□ -0.48
TRAPPC4-206ENST00000525303 CSADQ9Y600 493 aa12.05□□□□□ -0.48
TRAPPC4-206ENST00000525303 PTPRFP10586 1907 aa12.05□□□□□ -0.48
TRAPPC4-206ENST00000525303 UTYO14607 1347 aa12.05□□□□□ -0.48
TRAPPC4-206ENST00000525303 FRAT2O75474 233 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC4-206ENST00000525303 EN2P19622 333 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC4-206ENST00000525303 GTF2A2P52657 109 aa12.04□□□□□ -0.48
TRAPPC4-206ENST00000525303 HDLBPQ00341 1268 aaKnown RBP12.04□□□□□ -0.48
TRAPPC4-206ENST00000525303 LRRC24Q50LG9 513 aa12.04□□□□□ -0.48
TRAPPC4-206ENST00000525303 METTL24Q5JXM2 366 aa12.04□□□□□ -0.48
TRAPPC4-206ENST00000525303 FAM43AQ8N2R8 423 aa12.04□□□□□ -0.48
TRAPPC4-206ENST00000525303 TBC1D22AQ8WUA7 517 aa12.04□□□□□ -0.48
TRAPPC4-206ENST00000525303 TEKT1Q969V4 418 aa12.04□□□□□ -0.48
TRAPPC4-206ENST00000525303 ZFYVE28Q9HCC9 887 aa12.04□□□□□ -0.48
TRAPPC4-206ENST00000525303 PDE8BO95263 885 aa12.03□□□□□ -0.48
TRAPPC4-206ENST00000525303 RABL6Q3YEC7 729 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC4-206ENST00000525303 SLC9C1Q4G0N8 1177 aa12.03□□□□□ -0.48
TRAPPC4-206ENST00000525303 CAVIN4Q5BKX8 364 aa12.03□□□□□ -0.48
TRAPPC4-206ENST00000525303 VGLL2Q8N8G2 317 aa12.03□□□□□ -0.48
TRAPPC4-206ENST00000525303 ZNF333Q96JL9 665 aa12.03□□□□□ -0.48
TRAPPC4-206ENST00000525303 PTCH2Q9Y6C5 1203 aa12.03□□□□□ -0.48
TRAPPC4-206ENST00000525303 SPDYE5A6NIY4 337 aa12.02□□□□□ -0.49
TRAPPC4-206ENST00000525303 BCAMP50895 628 aa12.02□□□□□ -0.49
TRAPPC4-206ENST00000525303 ARHGEF6Q15052 776 aa12.02□□□□□ -0.49
TRAPPC4-206ENST00000525303 HABP4Q5JVS0 413 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-206ENST00000525303 ERO1BQ86YB8 467 aa12.02□□□□□ -0.49
TRAPPC4-206ENST00000525303 ANKRD44Q8N8A2 993 aa12.02□□□□□ -0.49
TRAPPC4-206ENST00000525303 KLHDC4Q8TBB5 520 aa12.02□□□□□ -0.49
TRAPPC4-206ENST00000525303 ZKSCAN4Q969J2 545 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC4-206ENST00000525303 ZDHHC15Q96MV8 337 aa12.02□□□□□ -0.49
TRAPPC4-206ENST00000525303 WRNIP1Q96S55 665 aa12.02□□□□□ -0.49
TRAPPC4-206ENST00000525303 TMEM106CQ9BVX2 250 aa12.02□□□□□ -0.49
TRAPPC4-206ENST00000525303 TMOD2Q9NZR1 351 aa12.02□□□□□ -0.49
TRAPPC4-206ENST00000525303 SNCAIPQ9Y6H5 919 aa12.02□□□□□ -0.49
TRAPPC4-206ENST00000525303 DOCK3Q8IZD9 2030 aa12.02□□□□□ -0.49
TRAPPC4-206ENST00000525303 WDHD1O75717 1129 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC4-206ENST00000525303 CETPP11597 493 aa12.01□□□□□ -0.49
TRAPPC4-206ENST00000525303 APOBEC3HQ6NTF7 200 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-206ENST00000525303 NBPF11Q86T75 865 aa12.01□□□□□ -0.49
TRAPPC4-206ENST00000525303 FAM83AQ86UY5 434 aa12.01□□□□□ -0.49
TRAPPC4-206ENST00000525303 TRIOBPQ9H2D6 2365 aa12.01□□□□□ -0.49
TRAPPC4-206ENST00000525303 PHIPQ8WWQ0 1821 aa12□□□□□ -0.49
TRAPPC4-206ENST00000525303 BTBD19C9JJ37 291 aa12□□□□□ -0.49
TRAPPC4-206ENST00000525303 IRF6O14896 467 aa12□□□□□ -0.49
TRAPPC4-206ENST00000525303 TLR2O60603 784 aa12□□□□□ -0.49
TRAPPC4-206ENST00000525303 MYCP01106 439 aaPredicted RBP12□□□□□ -0.49
TRAPPC4-206ENST00000525303 SNAPC2Q13487 334 aa12□□□□□ -0.49
TRAPPC4-206ENST00000525303 FKBP1CQ5VVH2 108 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms