RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 PWP1Q13610 501 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 SLC4A8Q2Y0W8 1093 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 MTERF2Q49AM1 385 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 FAM26DQ5JW98 314 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 PERM1Q5SV97 790 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 HYIQ5T013 277 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 C1QTNF12Q5T7M4 302 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 ANO1Q5XXA6 986 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 PCNX4Q63HM2 1172 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 IL31Q6EBC2 164 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 CASC1Q6TDU7 716 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 DZIP3Q86Y13 1208 aaKnown RBP5.53□□□□□ -1.52
CD44-213ENST00000525209 EHBP1Q8NDI1 1231 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 PPHLN1Q8NEY8 458 aaKnown RBP5.53□□□□□ -1.52
CD44-213ENST00000525209 ATL2Q8NHH9 583 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 ZNF296Q8WUU4 475 aaPredicted RBP5.53□□□□□ -1.52
CD44-213ENST00000525209 TRMT2BQ96GJ1 504 aaKnown RBP5.53□□□□□ -1.52
CD44-213ENST00000525209 TTC14Q96N46 770 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 HERPUD2Q9BSE4 406 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 SELENOOQ9BVL4 669 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 UNC93B1Q9H1C4 597 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 USP25Q9UHP3 1055 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 FBXO2Q9UK22 296 aaPredicted RBP5.53□□□□□ -1.52
CD44-213ENST00000525209 MAPK8IP1Q9UQF2 711 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 KDM2BQ8NHM5 1336 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 KLRG2A4D1S0 409 aaPredicted RBP5.52□□□□□ -1.53
CD44-213ENST00000525209 PRPF3O43395 683 aaKnown RBP5.52□□□□□ -1.53
CD44-213ENST00000525209 PDE8AO60658 829 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 CPNE3O75131 537 aaKnown RBP5.52□□□□□ -1.53
CD44-213ENST00000525209 RRM1P23921 792 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 NEK3P51956 506 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 DNM1Q05193 864 aaKnown RBP5.52□□□□□ -1.53
CD44-213ENST00000525209 PICALMQ13492 652 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 PTPRNQ16849 979 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 ALDH1L2Q3SY69 923 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 ERFEQ4G0M1 354 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 C1orf53Q5VUE5 145 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 USPL1Q5W0Q7 1092 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 WWC2Q6AWC2 1192 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 PI16Q6UXB8 463 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 MORC1Q86VD1 984 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 AFAP1L2Q8N4X5 818 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 UBR7Q8N806 425 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 CHMP7Q8WUX9 453 aaPredicted RBP5.52□□□□□ -1.53
CD44-213ENST00000525209 BAP1Q92560 729 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 EDEM1Q92611 657 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 ARHGAP9Q9BRR9 750 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 C2orf49Q9BVC5 232 aaPredicted RBP5.52□□□□□ -1.53
CD44-213ENST00000525209 LRRC27Q9C0I9 530 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 LGR6Q9HBX8 967 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 EVA1BQ9NVM1 165 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 PUF60Q9UHX1 559 aaKnown RBP5.52□□□□□ -1.53
CD44-213ENST00000525209 NOB1Q9ULX3 412 aaKnown RBP5.52□□□□□ -1.53
CD44-213ENST00000525209 RABGAP1Q9Y3P9 1069 aa5.52□□□□□ -1.53
CD44-213ENST00000525209 UNC13AQ9UPW8 1703 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 A0A1W2PRU2 124 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 C11orf95C9JLR9 678 aaPredicted RBP5.51□□□□□ -1.53
CD44-213ENST00000525209 DIAPH1O60610 1272 aaKnown RBP5.51□□□□□ -1.53
CD44-213ENST00000525209 RFPL1O75677 317 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 NBPF7P0C2Y1 421 aaPredicted RBP5.51□□□□□ -1.53
CD44-213ENST00000525209 RBP3P10745 1247 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 EPB42P16452 691 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 HALP42357 657 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 DGKGP49619 791 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 SMCPP49901 116 aaPredicted RBP5.51□□□□□ -1.53
CD44-213ENST00000525209 CTC1Q2NKJ3 1217 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 NBPF14Q5TI25 921 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 PDXDC1Q6P996 788 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 ARMCX6Q7L4S7 300 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 ZBTB33Q86T24 672 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 RELL1Q8IUW5 271 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 PASD1Q8IV76 773 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 TNS4Q8IZW8 715 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 FAM169BQ8N8A8 192 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 PJA1Q8NG27 643 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 IPO4Q8TEX9 1081 aaKnown RBP5.51□□□□□ -1.53
CD44-213ENST00000525209 ATXN2LQ8WWM7 1075 aaKnown RBP5.51□□□□□ -1.53
CD44-213ENST00000525209 SKA1Q96BD8 255 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 HOOK2Q96ED9 719 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 MYO19Q96H55 970 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 MPP4Q96JB8 637 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 GPR101Q96P66 508 aaPredicted RBP5.51□□□□□ -1.53
CD44-213ENST00000525209 STRBPQ96SI9 672 aaKnown RBP5.51□□□□□ -1.53
CD44-213ENST00000525209 SARGQ9BW04 601 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 SRCIN1Q9C0H9 1055 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 KCNQ5Q9NR82 932 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 OBP2AQ9NY56 170 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 C9orf78Q9NZ63 289 aaPredicted RBP5.51□□□□□ -1.53
CD44-213ENST00000525209 LRFN2Q9ULH4 789 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 TLL2Q9Y6L7 1015 aa5.51□□□□□ -1.53
CD44-213ENST00000525209 RASSF10A6NK89 507 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 TTC36A6NLP5 189 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 PRSS47A8MTI9 375 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 MINDY4BA8MYZ0 360 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 TMEM229AB2RXF0 380 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 IRS4O14654 1257 aaPredicted RBP5.5□□□□□ -1.53
CD44-213ENST00000525209 SIAH2O43255 324 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 CBFA2T2O43439 604 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 TRIM37O94972 964 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 EYA4O95677 639 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms