RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 DALRD3Q5D0E6 543 aaKnown RBP10.27□□□□□ -0.77
NEDD8-203ENST00000524927 CC2D2BQ6DHV5 1058 aa10.27□□□□□ -0.77
NEDD8-203ENST00000524927 SVOPQ8N4V2 548 aa10.27□□□□□ -0.77
NEDD8-203ENST00000524927 SYTL4Q96C24 671 aaPredicted RBP10.27□□□□□ -0.77
NEDD8-203ENST00000524927 CYLDQ9NQC7 956 aa10.27□□□□□ -0.77
NEDD8-203ENST00000524927 C5P01031 1676 aa10.27□□□□□ -0.77
NEDD8-203ENST00000524927 NSD2O96028 1365 aa10.26□□□□□ -0.77
NEDD8-203ENST00000524927 LILRA1O75019 489 aa10.26□□□□□ -0.77
NEDD8-203ENST00000524927 MMP10P09238 476 aa10.26□□□□□ -0.77
NEDD8-203ENST00000524927 LMNB1P20700 586 aa10.26□□□□□ -0.77
NEDD8-203ENST00000524927 KCNA3P22001 575 aa10.26□□□□□ -0.77
NEDD8-203ENST00000524927 SWI5Q1ZZU3 235 aa10.26□□□□□ -0.77
NEDD8-203ENST00000524927 FOXD4L5Q5VV16 416 aaPredicted RBP10.26□□□□□ -0.77
NEDD8-203ENST00000524927 CLP1Q92989 425 aaKnown RBP10.26□□□□□ -0.77
NEDD8-203ENST00000524927 IVNS1ABPQ9Y6Y0 642 aa10.26□□□□□ -0.77
NEDD8-203ENST00000524927 RNF225M0QZC1 329 aaPredicted RBP10.25□□□□□ -0.77
NEDD8-203ENST00000524927 DKK1O94907 266 aa10.25□□□□□ -0.77
NEDD8-203ENST00000524927 LYPD4Q6UWN0 246 aa10.25□□□□□ -0.77
NEDD8-203ENST00000524927 SMIM5Q71RC9 77 aa10.25□□□□□ -0.77
NEDD8-203ENST00000524927 SV2AQ7L0J3 742 aa10.25□□□□□ -0.77
NEDD8-203ENST00000524927 HINFPQ9BQA5 517 aa10.25□□□□□ -0.77
NEDD8-203ENST00000524927 POLMQ9NP87 494 aaPredicted RBP10.25□□□□□ -0.77
NEDD8-203ENST00000524927 USP47Q96K76 1375 aa10.25□□□□□ -0.77
NEDD8-203ENST00000524927 ATP2B4P23634 1241 aa10.24□□□□□ -0.77
NEDD8-203ENST00000524927 IRS1P35568 1242 aa10.24□□□□□ -0.77
NEDD8-203ENST00000524927 ECE1P42892 770 aa10.24□□□□□ -0.77
NEDD8-203ENST00000524927 ERVK-9P63128 1117 aa10.24□□□□□ -0.77
NEDD8-203ENST00000524927 TMCO4Q5TGY1 634 aa10.24□□□□□ -0.77
NEDD8-203ENST00000524927 ARHGEF25Q86VW2 580 aa10.24□□□□□ -0.77
NEDD8-203ENST00000524927 LTBP1Q14766 1721 aa10.24□□□□□ -0.77
NEDD8-203ENST00000524927 SSFA2P28290 1259 aa10.23□□□□□ -0.77
NEDD8-203ENST00000524927 GAS6Q14393 721 aa10.23□□□□□ -0.77
NEDD8-203ENST00000524927 AMIGO3Q86WK7 504 aa10.23□□□□□ -0.77
NEDD8-203ENST00000524927 LDHDQ86WU2 507 aa10.23□□□□□ -0.77
NEDD8-203ENST00000524927 CCDC87Q9NVE4 849 aa10.23□□□□□ -0.77
NEDD8-203ENST00000524927 CASP8AP2Q9UKL3 1982 aa10.23□□□□□ -0.77
NEDD8-203ENST00000524927 TOGARAM1Q9Y4F4 1720 aa10.22□□□□□ -0.77
NEDD8-203ENST00000524927 PRMT3O60678 531 aa10.22□□□□□ -0.77
NEDD8-203ENST00000524927 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.22□□□□□ -0.77
NEDD8-203ENST00000524927 CCER1Q8TC90 406 aaPredicted RBP10.22□□□□□ -0.77
NEDD8-203ENST00000524927 GPR101Q96P66 508 aaPredicted RBP10.22□□□□□ -0.77
NEDD8-203ENST00000524927 LGR5O75473 907 aa10.21□□□□□ -0.77
NEDD8-203ENST00000524927 MAP2K2P36507 400 aa10.21□□□□□ -0.77
NEDD8-203ENST00000524927 DDX54Q8TDD1 881 aaKnown RBP10.21□□□□□ -0.77
NEDD8-203ENST00000524927 CAPNS2Q96L46 248 aa10.21□□□□□ -0.77
NEDD8-203ENST00000524927 PRIMPOLQ96LW4 560 aa10.21□□□□□ -0.77
NEDD8-203ENST00000524927 OSBPL3Q9H4L5 887 aa10.21□□□□□ -0.77
NEDD8-203ENST00000524927 RGPD5Q99666 1765 aa10.21□□□□□ -0.78
NEDD8-203ENST00000524927 C4BP0C0L5 1744 aa10.2□□□□□ -0.78
NEDD8-203ENST00000524927 ARID4AP29374 1257 aaPredicted RBP10.2□□□□□ -0.78
NEDD8-203ENST00000524927 RGL3Q3MIN7 710 aa10.2□□□□□ -0.78
NEDD8-203ENST00000524927 PHLDB3Q6NSJ2 640 aa10.2□□□□□ -0.78
NEDD8-203ENST00000524927 UBR3Q6ZT12 1888 aa10.2□□□□□ -0.78
NEDD8-203ENST00000524927 TAF1LQ8IZX4 1826 aa10.2□□□□□ -0.78
NEDD8-203ENST00000524927 ABT1Q9ULW3 272 aaKnown RBP10.2□□□□□ -0.78
NEDD8-203ENST00000524927 ADH1AP07327 375 aa10.19□□□□□ -0.78
NEDD8-203ENST00000524927 PTGIRP43119 386 aa10.19□□□□□ -0.78
NEDD8-203ENST00000524927 CYP2U1Q7Z449 544 aa10.19□□□□□ -0.78
NEDD8-203ENST00000524927 TSEN2Q8NCE0 465 aaKnown RBP10.19□□□□□ -0.78
NEDD8-203ENST00000524927 KCNH5Q8NCM2 988 aa10.19□□□□□ -0.78
NEDD8-203ENST00000524927 ZNF358Q9NW07 568 aa10.19□□□□□ -0.78
NEDD8-203ENST00000524927 TIAM2Q8IVF5 1701 aa10.19□□□□□ -0.78
NEDD8-203ENST00000524927 DOT1LQ8TEK3 1739 aa10.19□□□□□ -0.78
NEDD8-203ENST00000524927 SZT2Q5T011 3432 aa10.18□□□□□ -0.78
NEDD8-203ENST00000524927 GDF10P55107 478 aa10.18□□□□□ -0.78
NEDD8-203ENST00000524927 GPAT2Q6NUI2 795 aa10.18□□□□□ -0.78
NEDD8-203ENST00000524927 NLGN1Q8N2Q7 840 aa10.18□□□□□ -0.78
NEDD8-203ENST00000524927 NLRP2Q9NX02 1062 aa10.18□□□□□ -0.78
NEDD8-203ENST00000524927 GNEQ9Y223 722 aaKnown RBP10.18□□□□□ -0.78
NEDD8-203ENST00000524927 MEGF6O75095 1541 aa10.17□□□□□ -0.78
NEDD8-203ENST00000524927 IQCA1LA6NCM1 817 aa10.17□□□□□ -0.78
NEDD8-203ENST00000524927 TMEM229AB2RXF0 380 aa10.17□□□□□ -0.78
NEDD8-203ENST00000524927 M0R2N6 131 aa10.17□□□□□ -0.78
NEDD8-203ENST00000524927 BACH1O14867 736 aa10.17□□□□□ -0.78
NEDD8-203ENST00000524927 STAU1O95793 577 aaKnown RBP10.17□□□□□ -0.78
NEDD8-203ENST00000524927 RHOQP17081 205 aa10.17□□□□□ -0.78
NEDD8-203ENST00000524927 CELA2BP08218 269 aaPredicted RBP10.16□□□□□ -0.78
NEDD8-203ENST00000524927 CXXC1Q9P0U4 656 aaPredicted RBP10.16□□□□□ -0.78
NEDD8-203ENST00000524927 SERTAD1Q9UHV2 236 aa10.16□□□□□ -0.78
NEDD8-203ENST00000524927 TRAK1Q9UPV9 953 aa10.16□□□□□ -0.78
NEDD8-203ENST00000524927 GNRH1P01148 92 aa10.15□□□□□ -0.78
NEDD8-203ENST00000524927 IGHA1P01876 353 aa10.15□□□□□ -0.78
NEDD8-203ENST00000524927 SCNN1DP51172 638 aa10.15□□□□□ -0.78
NEDD8-203ENST00000524927 MFAP1P55081 439 aaKnown RBP10.15□□□□□ -0.78
NEDD8-203ENST00000524927 PRICKLE2Q7Z3G6 844 aa10.15□□□□□ -0.78
NEDD8-203ENST00000524927 CDK19Q9BWU1 502 aa10.15□□□□□ -0.78
NEDD8-203ENST00000524927 MTMR7Q9Y216 660 aa10.15□□□□□ -0.78
NEDD8-203ENST00000524927 C4AP0C0L4 1744 aa10.15□□□□□ -0.78
NEDD8-203ENST00000524927 PALLDQ8WX93 1383 aa10.14□□□□□ -0.79
NEDD8-203ENST00000524927 INHAP05111 366 aa10.14□□□□□ -0.79
NEDD8-203ENST00000524927 SCNN1AP37088 669 aa10.14□□□□□ -0.79
NEDD8-203ENST00000524927 TMF1P82094 1093 aa10.14□□□□□ -0.79
NEDD8-203ENST00000524927 OCLNQ16625 522 aa10.14□□□□□ -0.79
NEDD8-203ENST00000524927 CYP4F22Q6NT55 531 aa10.14□□□□□ -0.79
NEDD8-203ENST00000524927 ETNK1Q9HBU6 452 aa10.14□□□□□ -0.79
NEDD8-203ENST00000524927 DNMT3AQ9Y6K1 912 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-203ENST00000524927 ADGRB1O14514 1584 aa10.14□□□□□ -0.79
NEDD8-203ENST00000524927 GPR25O00155 361 aa10.13□□□□□ -0.79
NEDD8-203ENST00000524927 MARSP56192 900 aaKnown RBP10.13□□□□□ -0.79
NEDD8-203ENST00000524927 SRSF11Q05519 484 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms