RNA–Protein interactions for RNA: ENST00000524568.1

NDUFS3-202, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 733 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-202ENST00000524568 FRAT2O75474 233 aaPredicted RBP24.36■■□□□ 1.49
NDUFS3-202ENST00000524568 IFIT1P09914 478 aaKnown RBP24.36■■□□□ 1.49
NDUFS3-202ENST00000524568 ARMC9Q7Z3E5 817 aa24.36■■□□□ 1.49
NDUFS3-202ENST00000524568 CIAO1O76071 339 aa24.35■■□□□ 1.49
NDUFS3-202ENST00000524568 SLC5A1P13866 664 aa24.35■■□□□ 1.49
NDUFS3-202ENST00000524568 CACNB3P54284 484 aa24.35■■□□□ 1.49
NDUFS3-202ENST00000524568 LPIN2Q92539 896 aa24.35■■□□□ 1.49
NDUFS3-202ENST00000524568 FRAT1Q92837 279 aaPredicted RBP24.35■■□□□ 1.49
NDUFS3-202ENST00000524568 CLUAP1Q96AJ1 413 aa24.35■■□□□ 1.49
NDUFS3-202ENST00000524568 MCOLN1Q9GZU1 580 aa24.35■■□□□ 1.49
NDUFS3-202ENST00000524568 PPP2R3BQ9Y5P8 575 aa24.35■■□□□ 1.49
NDUFS3-202ENST00000524568 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.35■■□□□ 1.49
NDUFS3-202ENST00000524568 ADORA1P30542 326 aa24.34■■□□□ 1.49
NDUFS3-202ENST00000524568 ATP2B3Q16720 1220 aa24.34■■□□□ 1.49
NDUFS3-202ENST00000524568 TCP10L2B9ZVM9 353 aa24.33■■□□□ 1.49
NDUFS3-202ENST00000524568 MAP3K11Q16584 847 aa24.33■■□□□ 1.49
NDUFS3-202ENST00000524568 ATF7IPQ6VMQ6 1270 aa24.33■■□□□ 1.49
NDUFS3-202ENST00000524568 TBC1D22AQ8WUA7 517 aa24.33■■□□□ 1.49
NDUFS3-202ENST00000524568 TEPSINQ96N21 525 aa24.33■■□□□ 1.49
NDUFS3-202ENST00000524568 TMEM39BQ9GZU3 492 aa24.33■■□□□ 1.49
NDUFS3-202ENST00000524568 COPRSQ9NQ92 184 aa24.33■■□□□ 1.49
NDUFS3-202ENST00000524568 USP2O75604 605 aaPredicted RBP24.32■■□□□ 1.48
NDUFS3-202ENST00000524568 SPRYD7Q5W111 196 aa24.32■■□□□ 1.48
NDUFS3-202ENST00000524568 PHKA1P46020 1223 aa24.31■■□□□ 1.48
NDUFS3-202ENST00000524568 DGKZQ13574 1117 aa24.31■■□□□ 1.48
NDUFS3-202ENST00000524568 CEP126Q9P2H0 1117 aa24.31■■□□□ 1.48
NDUFS3-202ENST00000524568 MYH2Q9UKX2 1941 aa24.3■■□□□ 1.48
NDUFS3-202ENST00000524568 TBC1D8O95759 1140 aa24.3■■□□□ 1.48
NDUFS3-202ENST00000524568 GJA5P36382 358 aa24.3■■□□□ 1.48
NDUFS3-202ENST00000524568 TEKT1Q969V4 418 aa24.3■■□□□ 1.48
NDUFS3-202ENST00000524568 R3HDMLQ9H3Y0 253 aa24.3■■□□□ 1.48
NDUFS3-202ENST00000524568 FBXO3Q9UK99 471 aa24.3■■□□□ 1.48
NDUFS3-202ENST00000524568 SRGAP3O43295 1099 aa24.29■■□□□ 1.48
NDUFS3-202ENST00000524568 IL15P40933 162 aaPredicted RBP24.29■■□□□ 1.48
NDUFS3-202ENST00000524568 TM4SF4P48230 202 aa24.29■■□□□ 1.48
NDUFS3-202ENST00000524568 HDLBPQ00341 1268 aaKnown RBP24.29■■□□□ 1.48
NDUFS3-202ENST00000524568 SUPT20HL1Q3ZLR7 823 aa24.29■■□□□ 1.48
NDUFS3-202ENST00000524568 APOBEC3HQ6NTF7 200 aaKnown RBP24.29■■□□□ 1.48
NDUFS3-202ENST00000524568 TMEM57Q8N5G2 664 aa24.29■■□□□ 1.48
NDUFS3-202ENST00000524568 WNK4Q96J92 1243 aa24.29■■□□□ 1.48
NDUFS3-202ENST00000524568 PPP1R12BO60237 982 aaPredicted RBP24.28■■□□□ 1.48
NDUFS3-202ENST00000524568 GNAI3P08754 354 aa24.28■■□□□ 1.48
NDUFS3-202ENST00000524568 PRDX5P30044 214 aa24.28■■□□□ 1.48
NDUFS3-202ENST00000524568 MTX1Q13505 466 aa24.28■■□□□ 1.48
NDUFS3-202ENST00000524568 REM2Q8IYK8 340 aaPredicted RBP24.28■■□□□ 1.48
NDUFS3-202ENST00000524568 ZDHHC15Q96MV8 337 aa24.28■■□□□ 1.48
NDUFS3-202ENST00000524568 PNMA6EA0A0J9YXQ4 647 aa24.27■■□□□ 1.48
NDUFS3-202ENST00000524568 IPO8O15397 1037 aaKnown RBP24.27■■□□□ 1.48
NDUFS3-202ENST00000524568 TNFAIP1Q13829 316 aa24.27■■□□□ 1.48
NDUFS3-202ENST00000524568 DIXDC1Q155Q3 683 aa24.27■■□□□ 1.48
NDUFS3-202ENST00000524568 SLC10A4Q96EP9 437 aa24.27■■□□□ 1.48
NDUFS3-202ENST00000524568 AK9Q5TCS8 1911 aa24.26■■□□□ 1.47
NDUFS3-202ENST00000524568 CCDC85CA6NKD9 419 aa24.26■■□□□ 1.47
NDUFS3-202ENST00000524568 TIMM10P62072 90 aa24.26■■□□□ 1.47
NDUFS3-202ENST00000524568 TFCP2Q12800 502 aa24.26■■□□□ 1.47
NDUFS3-202ENST00000524568 WDR66Q8TBY9 1149 aa24.25■■□□□ 1.47
NDUFS3-202ENST00000524568 CNKSR2Q8WXI2 1034 aa24.25■■□□□ 1.47
NDUFS3-202ENST00000524568 HDAC5Q9UQL6 1122 aa24.25■■□□□ 1.47
NDUFS3-202ENST00000524568 SUGT1Q9Y2Z0 365 aa24.25■■□□□ 1.47
NDUFS3-202ENST00000524568 RLBP1P12271 317 aa24.24■■□□□ 1.47
NDUFS3-202ENST00000524568 IREB2P48200 963 aaKnown RBP24.24■■□□□ 1.47
NDUFS3-202ENST00000524568 ZKSCAN2Q63HK3 967 aa24.24■■□□□ 1.47
NDUFS3-202ENST00000524568 CCDC102BQ68D86 513 aa24.24■■□□□ 1.47
NDUFS3-202ENST00000524568 DAGLAQ9Y4D2 1042 aa24.24■■□□□ 1.47
NDUFS3-202ENST00000524568 IGF2BP3O00425 579 aaKnown RBP eCLIP24.23■■□□□ 1.47
NDUFS3-202ENST00000524568 GNAI2P04899 355 aa24.23■■□□□ 1.47
NDUFS3-202ENST00000524568 SREBF2Q12772 1141 aa24.23■■□□□ 1.47
NDUFS3-202ENST00000524568 HHIPL2Q6UWX4 724 aa24.23■■□□□ 1.47
NDUFS3-202ENST00000524568 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.23■■□□□ 1.47
NDUFS3-202ENST00000524568 ZNF296Q8WUU4 475 aaPredicted RBP24.23■■□□□ 1.47
NDUFS3-202ENST00000524568 MRIQ9BWK5 157 aa24.23■■□□□ 1.47
NDUFS3-202ENST00000524568 ELP3Q9H9T3 547 aa24.23■■□□□ 1.47
NDUFS3-202ENST00000524568 MAST3O60307 1309 aa24.23■■□□□ 1.47
NDUFS3-202ENST00000524568 A0A1B0GUL7 405 aa24.22■■□□□ 1.47
NDUFS3-202ENST00000524568 RASGRF1Q13972 1273 aa24.22■■□□□ 1.47
NDUFS3-202ENST00000524568 ANKRD13AQ8IZ07 590 aa24.22■■□□□ 1.47
NDUFS3-202ENST00000524568 C1orf115Q9H7X2 142 aa24.22■■□□□ 1.47
NDUFS3-202ENST00000524568 ZBTB48P10074 688 aaPredicted RBP24.21■■□□□ 1.47
NDUFS3-202ENST00000524568 TNNI2P48788 182 aa24.21■■□□□ 1.47
NDUFS3-202ENST00000524568 VGLL4Q14135 290 aa24.21■■□□□ 1.47
NDUFS3-202ENST00000524568 XAGE2Q96GT9 111 aa24.21■■□□□ 1.47
NDUFS3-202ENST00000524568 ZBED9Q6R2W3 1325 aa24.2■■□□□ 1.46
NDUFS3-202ENST00000524568 SALL1Q9NSC2 1324 aa24.2■■□□□ 1.46
NDUFS3-202ENST00000524568 NFIAQ12857 509 aa24.2■■□□□ 1.46
NDUFS3-202ENST00000524568 CDC42EP5Q6NZY7 148 aa24.2■■□□□ 1.46
NDUFS3-202ENST00000524568 IFNL1Q8IU54 200 aa24.2■■□□□ 1.46
NDUFS3-202ENST00000524568 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.2■■□□□ 1.46
NDUFS3-202ENST00000524568 GNL3LQ9NVN8 582 aaKnown RBP24.2■■□□□ 1.46
NDUFS3-202ENST00000524568 DOCK2Q92608 1830 aa24.19■■□□□ 1.46
NDUFS3-202ENST00000524568 MANSC4A6NHS7 340 aaPredicted RBP24.19■■□□□ 1.46
NDUFS3-202ENST00000524568 GPR25O00155 361 aa24.19■■□□□ 1.46
NDUFS3-202ENST00000524568 OPTNQ96CV9 577 aa24.19■■□□□ 1.46
NDUFS3-202ENST00000524568 DENND2AQ9ULE3 1009 aa24.19■■□□□ 1.46
NDUFS3-202ENST00000524568 MYO5AQ9Y4I1 1855 aaKnown RBP24.19■■□□□ 1.46
NDUFS3-202ENST00000524568 LDHBP07195 334 aaKnown RBP24.18■■□□□ 1.46
NDUFS3-202ENST00000524568 PI16Q6UXB8 463 aa24.18■■□□□ 1.46
NDUFS3-202ENST00000524568 CTU1Q7Z7A3 348 aaKnown RBP24.18■■□□□ 1.46
NDUFS3-202ENST00000524568 FAM83AQ86UY5 434 aa24.18■■□□□ 1.46
NDUFS3-202ENST00000524568 PTPN18Q99952 460 aa24.18■■□□□ 1.46
NDUFS3-202ENST00000524568 TMOD2Q9NZR1 351 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 267.1 ms