RNA–Protein interactions for RNA: ENST00000524478.1

MMP3-203, Transcript of matrix metallopeptidase 3, humanhuman

TSL 4

Gene MMP3, Length 559 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-203ENST00000524478 HELBQ8NG08 1087 aaPredicted RBP12.14□□□□□ -0.47
MMP3-203ENST00000524478 SH3TC2Q8TF17 1288 aa12.14□□□□□ -0.47
MMP3-203ENST00000524478 CCL15-CCL14A0A0B4J2E2 113 aa12.13□□□□□ -0.47
MMP3-203ENST00000524478 APAF1O14727 1248 aa12.13□□□□□ -0.47
MMP3-203ENST00000524478 CSF1RP07333 972 aa12.13□□□□□ -0.47
MMP3-203ENST00000524478 VGLL4Q14135 290 aa12.13□□□□□ -0.47
MMP3-203ENST00000524478 TAF1CQ15572 869 aaPredicted RBP12.13□□□□□ -0.47
MMP3-203ENST00000524478 CCL15Q16663 113 aa12.13□□□□□ -0.47
MMP3-203ENST00000524478 SUPT20HL1Q3ZLR7 823 aa12.13□□□□□ -0.47
MMP3-203ENST00000524478 OTUD7BQ6GQQ9 843 aa12.13□□□□□ -0.47
MMP3-203ENST00000524478 TSR2Q969E8 191 aaKnown RBP12.13□□□□□ -0.47
MMP3-203ENST00000524478 MPHOSPH8Q99549 860 aa12.13□□□□□ -0.47
MMP3-203ENST00000524478 TMEM106CQ9BVX2 250 aa12.13□□□□□ -0.47
MMP3-203ENST00000524478 PTPRFP10586 1907 aa12.13□□□□□ -0.47
MMP3-203ENST00000524478 MYO1BO43795 1136 aa12.12□□□□□ -0.47
MMP3-203ENST00000524478 FKBP1AP62942 108 aaKnown RBP12.12□□□□□ -0.47
MMP3-203ENST00000524478 NEXNQ0ZGT2 675 aa12.12□□□□□ -0.47
MMP3-203ENST00000524478 SLC4A8Q2Y0W8 1093 aa12.12□□□□□ -0.47
MMP3-203ENST00000524478 FAM9BQ8IZU0 186 aa12.12□□□□□ -0.47
MMP3-203ENST00000524478 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.12□□□□□ -0.47
MMP3-203ENST00000524478 ZNF70Q9UC06 446 aaPredicted RBP12.12□□□□□ -0.47
MMP3-203ENST00000524478 CTGFP29279 349 aa12.11□□□□□ -0.47
MMP3-203ENST00000524478 ZNF804AQ7Z570 1209 aa12.11□□□□□ -0.47
MMP3-203ENST00000524478 TMEM39BQ9GZU3 492 aa12.11□□□□□ -0.47
MMP3-203ENST00000524478 PRO3102Q9H379 93 aa12.11□□□□□ -0.47
MMP3-203ENST00000524478 RBM27Q9P2N5 1060 aaKnown RBP12.11□□□□□ -0.47
MMP3-203ENST00000524478 SNCAIPQ9Y6H5 919 aa12.11□□□□□ -0.47
MMP3-203ENST00000524478 DNAH12Q6ZR08 3092 aa12.11□□□□□ -0.47
MMP3-203ENST00000524478 PRUNE2Q8WUY3 3088 aa12.1□□□□□ -0.47
MMP3-203ENST00000524478 DOCK2Q92608 1830 aa12.1□□□□□ -0.47
MMP3-203ENST00000524478 LACTBP83111 547 aaPredicted RBP12.1□□□□□ -0.47
MMP3-203ENST00000524478 MTFR1Q15390 333 aa12.1□□□□□ -0.47
MMP3-203ENST00000524478 UBE2Q1Q7Z7E8 422 aa12.1□□□□□ -0.47
MMP3-203ENST00000524478 TDRD3Q9H7E2 651 aaKnown RBP12.1□□□□□ -0.47
MMP3-203ENST00000524478 ZFYVE28Q9HCC9 887 aa12.1□□□□□ -0.47
MMP3-203ENST00000524478 FAM205AQ6ZU69 1335 aa12.1□□□□□ -0.47
MMP3-203ENST00000524478 ADGRA2Q96PE1 1338 aa12.1□□□□□ -0.47
MMP3-203ENST00000524478 SPDYE5A6NIY4 337 aa12.09□□□□□ -0.47
MMP3-203ENST00000524478 BTBD19C9JJ37 291 aa12.09□□□□□ -0.47
MMP3-203ENST00000524478 ABCB7O75027 752 aa12.09□□□□□ -0.47
MMP3-203ENST00000524478 GTF2A2P52657 109 aa12.09□□□□□ -0.47
MMP3-203ENST00000524478 RBM5P52756 815 aaKnown RBP eCLIP12.09□□□□□ -0.47
MMP3-203ENST00000524478 FOXO4P98177 505 aa12.09□□□□□ -0.47
MMP3-203ENST00000524478 CALD1Q05682 793 aaKnown RBP12.09□□□□□ -0.47
MMP3-203ENST00000524478 FLIIQ13045 1269 aa12.09□□□□□ -0.47
MMP3-203ENST00000524478 TNFAIP1Q13829 316 aa12.09□□□□□ -0.47
MMP3-203ENST00000524478 GRIK5Q16478 980 aa12.09□□□□□ -0.47
MMP3-203ENST00000524478 MFSD14BQ5SR56 506 aa12.09□□□□□ -0.47
MMP3-203ENST00000524478 NBPF11Q86T75 865 aa12.09□□□□□ -0.47
MMP3-203ENST00000524478 DOCK3Q8IZD9 2030 aa12.09□□□□□ -0.47
MMP3-203ENST00000524478 ANKRD18BA2A2Z9 1011 aa12.08□□□□□ -0.48
MMP3-203ENST00000524478 TCP10L2B9ZVM9 353 aa12.08□□□□□ -0.48
MMP3-203ENST00000524478 TLR2O60603 784 aa12.08□□□□□ -0.48
MMP3-203ENST00000524478 HNRNPUQ00839 825 aaKnown RBP eCLIP12.08□□□□□ -0.48
MMP3-203ENST00000524478 EPHA10Q5JZY3 1008 aa12.08□□□□□ -0.48
MMP3-203ENST00000524478 DZIP1LQ8IYY4 767 aaKnown RBP12.08□□□□□ -0.48
MMP3-203ENST00000524478 ZNF594Q96JF6 807 aaPredicted RBP12.08□□□□□ -0.48
MMP3-203ENST00000524478 STK31Q9BXU1 1019 aa12.08□□□□□ -0.48
MMP3-203ENST00000524478 SERPINA10Q9UK55 444 aa12.08□□□□□ -0.48
MMP3-203ENST00000524478 TTF2Q9UNY4 1162 aaKnown RBP12.08□□□□□ -0.48
MMP3-203ENST00000524478 RPAP1Q9BWH6 1393 aaPredicted RBP12.07□□□□□ -0.48
MMP3-203ENST00000524478 PHIPQ8WWQ0 1821 aa12.07□□□□□ -0.48
MMP3-203ENST00000524478 ECM2O94769 699 aaPredicted RBP12.07□□□□□ -0.48
MMP3-203ENST00000524478 CACNB3P54284 484 aa12.07□□□□□ -0.48
MMP3-203ENST00000524478 DNAAF4Q8WXU2 420 aa12.07□□□□□ -0.48
MMP3-203ENST00000524478 TRIM47Q96LD4 638 aa12.07□□□□□ -0.48
MMP3-203ENST00000524478 MYH16Q9H6N6 1097 aa12.07□□□□□ -0.48
MMP3-203ENST00000524478 AK9Q5TCS8 1911 aa12.07□□□□□ -0.48
MMP3-203ENST00000524478 SOX1O00570 391 aaPredicted RBP12.06□□□□□ -0.48
MMP3-203ENST00000524478 IRF6O14896 467 aa12.06□□□□□ -0.48
MMP3-203ENST00000524478 CRKP46108 304 aa12.06□□□□□ -0.48
MMP3-203ENST00000524478 GYG1P46976 350 aa12.06□□□□□ -0.48
MMP3-203ENST00000524478 MAP3K9P80192 1104 aa12.06□□□□□ -0.48
MMP3-203ENST00000524478 IFIT5Q13325 482 aaKnown RBP12.06□□□□□ -0.48
MMP3-203ENST00000524478 TWISTNBQ3B726 338 aaPredicted RBP12.06□□□□□ -0.48
MMP3-203ENST00000524478 LINS1Q8NG48 757 aa12.06□□□□□ -0.48
MMP3-203ENST00000524478 TDRD7Q8NHU6 1098 aaKnown RBP12.06□□□□□ -0.48
MMP3-203ENST00000524478 CSADQ9Y600 493 aa12.06□□□□□ -0.48
MMP3-203ENST00000524478 SPTBN5Q9NRC6 3674 aaKnown RBP12.06□□□□□ -0.48
MMP3-203ENST00000524478 SLC4A2P04920 1241 aa12.05□□□□□ -0.48
MMP3-203ENST00000524478 CETPP11597 493 aa12.05□□□□□ -0.48
MMP3-203ENST00000524478 FKBP5Q13451 457 aaPredicted RBP12.05□□□□□ -0.48
MMP3-203ENST00000524478 ZKSCAN4Q969J2 545 aaPredicted RBP12.05□□□□□ -0.48
MMP3-203ENST00000524478 WRNIP1Q96S55 665 aa12.05□□□□□ -0.48
MMP3-203ENST00000524478 ZCCHC17Q9NP64 241 aaKnown RBP12.05□□□□□ -0.48
MMP3-203ENST00000524478 CHMP3Q9Y3E7 222 aa12.05□□□□□ -0.48
MMP3-203ENST00000524478 DOCK1Q14185 1865 aa12.05□□□□□ -0.48
MMP3-203ENST00000524478 OSBPP22059 807 aa12.04□□□□□ -0.48
MMP3-203ENST00000524478 PPIL2Q13356 520 aa12.04□□□□□ -0.48
MMP3-203ENST00000524478 MOGSQ13724 837 aa12.04□□□□□ -0.48
MMP3-203ENST00000524478 ARHGEF6Q15052 776 aa12.04□□□□□ -0.48
MMP3-203ENST00000524478 LMBR1LQ6UX01 489 aa12.04□□□□□ -0.48
MMP3-203ENST00000524478 C17orf99Q6UX52 265 aa12.04□□□□□ -0.48
MMP3-203ENST00000524478 ERO1BQ86YB8 467 aa12.04□□□□□ -0.48
MMP3-203ENST00000524478 SRRDQ9UH36 339 aa12.04□□□□□ -0.48
MMP3-203ENST00000524478 CPA4Q9UI42 421 aa12.04□□□□□ -0.48
MMP3-203ENST00000524478 CDH23Q9H251 3354 aa12.04□□□□□ -0.48
MMP3-203ENST00000524478 DDX60LQ5H9U9 1706 aaKnown RBP12.03□□□□□ -0.48
MMP3-203ENST00000524478 F6X3S4 739 aa12.03□□□□□ -0.48
MMP3-203ENST00000524478 ZBTB7BO15156 539 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms