RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 DLGAP5Q15398 846 aa14.72□□□□□ -0.05
CLN8-207ENST00000524258 APOBEC3HQ6NTF7 200 aaKnown RBP14.72□□□□□ -0.05
CLN8-207ENST00000524258 KIF1BPQ96EK5 621 aa14.72□□□□□ -0.05
CLN8-207ENST00000524258 IL1RAPL2Q9NP60 686 aa14.72□□□□□ -0.05
CLN8-207ENST00000524258 CREBZFQ9NS37 354 aa14.72□□□□□ -0.05
CLN8-207ENST00000524258 SCAF8Q9UPN6 1271 aaKnown RBP14.72□□□□□ -0.05
CLN8-207ENST00000524258 TMEM88BA6NKF7 163 aa14.71□□□□□ -0.05
CLN8-207ENST00000524258 EXOC6Q8TAG9 804 aa14.71□□□□□ -0.05
CLN8-207ENST00000524258 DCPSQ96C86 337 aaKnown RBP14.71□□□□□ -0.05
CLN8-207ENST00000524258 UQCRFS1P1P0C7P4 283 aa14.7□□□□□ -0.06
CLN8-207ENST00000524258 HHIPL2Q6UWX4 724 aa14.7□□□□□ -0.06
CLN8-207ENST00000524258 SPATA5Q8NB90 893 aa14.7□□□□□ -0.06
CLN8-207ENST00000524258 ZDHHC15Q96MV8 337 aa14.7□□□□□ -0.06
CLN8-207ENST00000524258 AKAP11Q9UKA4 1901 aa14.7□□□□□ -0.06
CLN8-207ENST00000524258 DIXDC1Q155Q3 683 aa14.69□□□□□ -0.06
CLN8-207ENST00000524258 SPDYE2Q495Y8 402 aa14.69□□□□□ -0.06
CLN8-207ENST00000524258 TBC1D9Q6ZT07 1266 aa14.69□□□□□ -0.06
CLN8-207ENST00000524258 AACSQ86V21 672 aa14.69□□□□□ -0.06
CLN8-207ENST00000524258 FAM163AQ96GL9 167 aaPredicted RBP14.69□□□□□ -0.06
CLN8-207ENST00000524258 ZNF70Q9UC06 446 aaPredicted RBP14.69□□□□□ -0.06
CLN8-207ENST00000524258 APBB1O00213 710 aa14.68□□□□□ -0.06
CLN8-207ENST00000524258 SMARCA5O60264 1052 aaPredicted RBP14.68□□□□□ -0.06
CLN8-207ENST00000524258 CELF2O95319 508 aaKnown RBP14.68□□□□□ -0.06
CLN8-207ENST00000524258 CYP2E1P05181 493 aaPredicted RBP14.68□□□□□ -0.06
CLN8-207ENST00000524258 LDHBP07195 334 aaKnown RBP14.68□□□□□ -0.06
CLN8-207ENST00000524258 HDAC1Q13547 482 aaPredicted RBP14.68□□□□□ -0.06
CLN8-207ENST00000524258 AAMPQ13685 434 aa14.68□□□□□ -0.06
CLN8-207ENST00000524258 GORABQ5T7V8 394 aa14.68□□□□□ -0.06
CLN8-207ENST00000524258 PRAMEF18Q5VWM3 479 aa14.68□□□□□ -0.06
CLN8-207ENST00000524258 SULF1Q8IWU6 871 aa14.68□□□□□ -0.06
CLN8-207ENST00000524258 TEKT1Q969V4 418 aa14.68□□□□□ -0.06
CLN8-207ENST00000524258 CDCA5Q96FF9 252 aa14.68□□□□□ -0.06
CLN8-207ENST00000524258 TDRD3Q9H7E2 651 aaKnown RBP14.68□□□□□ -0.06
CLN8-207ENST00000524258 SNRKQ9NRH2 765 aa14.68□□□□□ -0.06
CLN8-207ENST00000524258 DAGLAQ9Y4D2 1042 aa14.68□□□□□ -0.06
CLN8-207ENST00000524258 GAKO14976 1311 aa14.67□□□□□ -0.06
CLN8-207ENST00000524258 CLRN2A0PK11 232 aa14.67□□□□□ -0.06
CLN8-207ENST00000524258 RASSF10A6NK89 507 aa14.67□□□□□ -0.06
CLN8-207ENST00000524258 ZAP70P43403 619 aa14.67□□□□□ -0.06
CLN8-207ENST00000524258 CCDC158Q5M9N0 1113 aa14.67□□□□□ -0.06
CLN8-207ENST00000524258 TTC39AQ5SRH9 613 aa14.67□□□□□ -0.06
CLN8-207ENST00000524258 CLASRPQ8N2M8 674 aaKnown RBP14.67□□□□□ -0.06
CLN8-207ENST00000524258 TLL2Q9Y6L7 1015 aa14.67□□□□□ -0.06
CLN8-207ENST00000524258 MAST3O60307 1309 aa14.66□□□□□ -0.06
CLN8-207ENST00000524258 PCNTO95613 3336 aa14.66□□□□□ -0.06
CLN8-207ENST00000524258 TRPM7Q96QT4 1865 aa14.66□□□□□ -0.06
CLN8-207ENST00000524258 CNTNAP1P78357 1384 aa14.66□□□□□ -0.06
CLN8-207ENST00000524258 RBM5P52756 815 aaKnown RBP eCLIP14.66□□□□□ -0.06
CLN8-207ENST00000524258 MECOMQ03112 1051 aa14.66□□□□□ -0.06
CLN8-207ENST00000524258 SAPCD2Q86UD0 394 aa14.66□□□□□ -0.06
CLN8-207ENST00000524258 APOBEC3FQ8IUX4 373 aaKnown RBP14.66□□□□□ -0.06
CLN8-207ENST00000524258 ZGPATQ8N5A5 531 aaKnown RBP14.66□□□□□ -0.06
CLN8-207ENST00000524258 NSUN4Q96CB9 384 aaKnown RBP14.66□□□□□ -0.06
CLN8-207ENST00000524258 KLRG1Q96E93 195 aa14.66□□□□□ -0.06
CLN8-207ENST00000524258 TEPSINQ96N21 525 aa14.66□□□□□ -0.06
CLN8-207ENST00000524258 LRRCC1Q9C099 1032 aa14.66□□□□□ -0.06
CLN8-207ENST00000524258 DEFB129Q9H1M3 183 aa14.66□□□□□ -0.06
CLN8-207ENST00000524258 PIH1D3Q9NQM4 214 aaKnown RBP14.66□□□□□ -0.06
CLN8-207ENST00000524258 MYH13Q9UKX3 1938 aa14.66□□□□□ -0.06
CLN8-207ENST00000524258 CDC42EP5Q6NZY7 148 aa14.65□□□□□ -0.06
CLN8-207ENST00000524258 CDAN1Q8IWY9 1227 aa14.65□□□□□ -0.06
CLN8-207ENST00000524258 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.65□□□□□ -0.06
CLN8-207ENST00000524258 ABCF2Q9UG63 623 aa14.65□□□□□ -0.06
CLN8-207ENST00000524258 NDUFB9Q9Y6M9 179 aa14.65□□□□□ -0.06
CLN8-207ENST00000524258 SSC5DA1L4H1 1573 aa14.64□□□□□ -0.07
CLN8-207ENST00000524258 IGHDP01880 384 aa14.64□□□□□ -0.07
CLN8-207ENST00000524258 RASA3Q14644 834 aa14.64□□□□□ -0.07
CLN8-207ENST00000524258 FKBP1CQ5VVH2 108 aa14.64□□□□□ -0.07
CLN8-207ENST00000524258 SPTY2D1Q68D10 685 aaPredicted RBP14.64□□□□□ -0.07
CLN8-207ENST00000524258 ERICH6Q7L0X2 663 aa14.64□□□□□ -0.07
CLN8-207ENST00000524258 JMYQ8N9B5 988 aa14.64□□□□□ -0.07
CLN8-207ENST00000524258 ANTXR1Q9H6X2 564 aa14.64□□□□□ -0.07
CLN8-207ENST00000524258 GBA2Q9HCG7 927 aaPredicted RBP14.64□□□□□ -0.07
CLN8-207ENST00000524258 RFX7Q2KHR2 1363 aa14.63□□□□□ -0.07
CLN8-207ENST00000524258 GPR75-ASB3A0A0A6YYF3 556 aa14.63□□□□□ -0.07
CLN8-207ENST00000524258 ATP5JP18859 108 aa14.63□□□□□ -0.07
CLN8-207ENST00000524258 CACNB3P54284 484 aa14.63□□□□□ -0.07
CLN8-207ENST00000524258 RHBDL3P58872 404 aa14.63□□□□□ -0.07
CLN8-207ENST00000524258 MOB2Q70IA6 237 aa14.63□□□□□ -0.07
CLN8-207ENST00000524258 HHIPL1Q96JK4 782 aa14.63□□□□□ -0.07
CLN8-207ENST00000524258 ZNF408Q9H9D4 720 aa14.63□□□□□ -0.07
CLN8-207ENST00000524258 MKRN1Q9UHC7 482 aaKnown RBP14.63□□□□□ -0.07
CLN8-207ENST00000524258 PPP2R3BQ9Y5P8 575 aa14.63□□□□□ -0.07
CLN8-207ENST00000524258 ECM29Q5VYK3 1845 aa14.63□□□□□ -0.07
CLN8-207ENST00000524258 SALL3Q9BXA9 1300 aa14.63□□□□□ -0.07
CLN8-207ENST00000524258 MYO1BO43795 1136 aa14.62□□□□□ -0.07
CLN8-207ENST00000524258 IGSF3O75054 1194 aa14.62□□□□□ -0.07
CLN8-207ENST00000524258 IFIT2P09913 472 aaKnown RBP14.62□□□□□ -0.07
CLN8-207ENST00000524258 VEGFBP49765 207 aa14.62□□□□□ -0.07
CLN8-207ENST00000524258 IRX6P78412 446 aaPredicted RBP14.62□□□□□ -0.07
CLN8-207ENST00000524258 NFIAQ12857 509 aa14.62□□□□□ -0.07
CLN8-207ENST00000524258 DEFB115Q30KQ5 88 aa14.62□□□□□ -0.07
CLN8-207ENST00000524258 NBPF12Q5TAG4 269 aaPredicted RBP14.62□□□□□ -0.07
CLN8-207ENST00000524258 FAM83AQ86UY5 434 aa14.62□□□□□ -0.07
CLN8-207ENST00000524258 SMC5Q8IY18 1101 aa14.62□□□□□ -0.07
CLN8-207ENST00000524258 VEZTQ9HBM0 779 aa14.62□□□□□ -0.07
CLN8-207ENST00000524258 FAM198AQ9UFP1 575 aa14.62□□□□□ -0.07
CLN8-207ENST00000524258 MROH7-TTC4A0A0A0MT08 1334 aa14.62□□□□□ -0.07
CLN8-207ENST00000524258 TCP10L2B9ZVM9 353 aa14.61□□□□□ -0.07
CLN8-207ENST00000524258 WDHD1O75717 1129 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms