RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	LLPH	Q9BRT6	129 aa	Known RBP	12.7	□□□□□ -0.38
SPIDR-222	ENST00000524006	BAZ2A	Q9UIF9	1905 aa	Known RBP	12.7	□□□□□ -0.38
SPIDR-222	ENST00000524006	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.7	□□□□□ -0.38
SPIDR-222	ENST00000524006	RPS6KA4	O75676	772 aa		12.69	□□□□□ -0.38
SPIDR-222	ENST00000524006	PDE6A	P16499	860 aa		12.69	□□□□□ -0.38
SPIDR-222	ENST00000524006	KRT85	P78386	507 aa		12.69	□□□□□ -0.38
SPIDR-222	ENST00000524006	UBE3C	Q15386	1083 aa		12.69	□□□□□ -0.38
SPIDR-222	ENST00000524006	ZSCAN23	Q3MJ62	389 aa		12.69	□□□□□ -0.38
SPIDR-222	ENST00000524006	ERFE	Q4G0M1	354 aa		12.69	□□□□□ -0.38
SPIDR-222	ENST00000524006	CAVIN4	Q5BKX8	364 aa		12.69	□□□□□ -0.38
SPIDR-222	ENST00000524006	PI16	Q6UXB8	463 aa		12.69	□□□□□ -0.38
SPIDR-222	ENST00000524006	OSBP2	Q969R2	916 aa		12.69	□□□□□ -0.38
SPIDR-222	ENST00000524006	NACAP1	Q9BZK3	213 aa		12.69	□□□□□ -0.38
SPIDR-222	ENST00000524006	SEC31B	Q9NQW1	1179 aa		12.69	□□□□□ -0.38
SPIDR-222	ENST00000524006	NARF	Q9UHQ1	456 aa		12.69	□□□□□ -0.38
SPIDR-222	ENST00000524006	MYH2	Q9UKX2	1941 aa		12.68	□□□□□ -0.38
SPIDR-222	ENST00000524006	ZNF532	Q9HCE3	1301 aa		12.68	□□□□□ -0.38
SPIDR-222	ENST00000524006	GOLGA6L4	A6NEF3	574 aa		12.68	□□□□□ -0.38
SPIDR-222	ENST00000524006	DHX16	O60231	1041 aa	Known RBP	12.68	□□□□□ -0.38
SPIDR-222	ENST00000524006	GRIN3B	O60391	1043 aa		12.68	□□□□□ -0.38
SPIDR-222	ENST00000524006	CHGB	P05060	677 aa		12.68	□□□□□ -0.38
SPIDR-222	ENST00000524006	HMGB2	P26583	209 aa	Known RBP	12.68	□□□□□ -0.38
SPIDR-222	ENST00000524006	MCM5	P33992	734 aa		12.68	□□□□□ -0.38
SPIDR-222	ENST00000524006	HAND2	P61296	217 aa		12.68	□□□□□ -0.38
SPIDR-222	ENST00000524006	CHRND	Q07001	517 aa		12.68	□□□□□ -0.38
SPIDR-222	ENST00000524006	PIH1D3	Q9NQM4	214 aa	Known RBP	12.68	□□□□□ -0.38
SPIDR-222	ENST00000524006	LRP2BP	Q9P2M1	347 aa		12.68	□□□□□ -0.38
SPIDR-222	ENST00000524006	BRPF3	Q9ULD4	1205 aa		12.68	□□□□□ -0.38
SPIDR-222	ENST00000524006	CNPY2	Q9Y2B0	182 aa		12.68	□□□□□ -0.38
SPIDR-222	ENST00000524006	DUOX1	Q9NRD9	1551 aa		12.68	□□□□□ -0.38
SPIDR-222	ENST00000524006	NAV1	Q8NEY1	1877 aa		12.68	□□□□□ -0.38
SPIDR-222	ENST00000524006	GNAT2	P19087	354 aa		12.67	□□□□□ -0.38
SPIDR-222	ENST00000524006	FGFR2	P21802	821 aa		12.67	□□□□□ -0.38
SPIDR-222	ENST00000524006	RFC4	P35249	363 aa		12.67	□□□□□ -0.38
SPIDR-222	ENST00000524006	ZNF445	P59923	1031 aa		12.67	□□□□□ -0.38
SPIDR-222	ENST00000524006	SLFNL1	Q499Z3	407 aa		12.67	□□□□□ -0.38
SPIDR-222	ENST00000524006	SMIM5	Q71RC9	77 aa		12.67	□□□□□ -0.38
SPIDR-222	ENST00000524006	MAGEB6	Q8N7X4	407 aa		12.67	□□□□□ -0.38
SPIDR-222	ENST00000524006	TMEM87A	Q8NBN3	555 aa		12.67	□□□□□ -0.38
SPIDR-222	ENST00000524006	TRIM44	Q96DX7	344 aa	Predicted RBP	12.67	□□□□□ -0.38
SPIDR-222	ENST00000524006	NLRP3	Q96P20	1036 aa		12.67	□□□□□ -0.38
SPIDR-222	ENST00000524006	LRRC2	Q9BYS8	371 aa		12.67	□□□□□ -0.38
SPIDR-222	ENST00000524006	NAPB	Q9H115	298 aa		12.67	□□□□□ -0.38
SPIDR-222	ENST00000524006	MTMR6	Q9Y217	621 aa		12.67	□□□□□ -0.38
SPIDR-222	ENST00000524006	CD2AP	Q9Y5K6	639 aa		12.67	□□□□□ -0.38
SPIDR-222	ENST00000524006	TAF6L	Q9Y6J9	622 aa		12.67	□□□□□ -0.38
SPIDR-222	ENST00000524006	CARMIL3	Q8ND23	1372 aa		12.67	□□□□□ -0.38
SPIDR-222	ENST00000524006	WDR19	Q8NEZ3	1342 aa		12.66	□□□□□ -0.38
SPIDR-222	ENST00000524006	GOLGA8B	A8MQT2	603 aa		12.66	□□□□□ -0.38
SPIDR-222	ENST00000524006	PRC1	O43663	620 aa		12.66	□□□□□ -0.38
SPIDR-222	ENST00000524006	PFKFB2	O60825	505 aa		12.66	□□□□□ -0.38
SPIDR-222	ENST00000524006	LETM1	O95202	739 aa	Predicted RBP	12.66	□□□□□ -0.38
SPIDR-222	ENST00000524006	TDO2	P48775	406 aa		12.66	□□□□□ -0.38
SPIDR-222	ENST00000524006	NASP	P49321	788 aa	Predicted RBP	12.66	□□□□□ -0.38
SPIDR-222	ENST00000524006	UBE2H	P62256	183 aa		12.66	□□□□□ -0.38
SPIDR-222	ENST00000524006	APOBR	Q0VD83	1088 aa		12.66	□□□□□ -0.38
SPIDR-222	ENST00000524006	RASGRF1	Q13972	1273 aa		12.66	□□□□□ -0.38
SPIDR-222	ENST00000524006	CPLX2	Q6PUV4	134 aa	Known RBP	12.66	□□□□□ -0.38
SPIDR-222	ENST00000524006	TPTE2	Q6XPS3	522 aa		12.66	□□□□□ -0.38
SPIDR-222	ENST00000524006	STOX1	Q6ZVD7	989 aa		12.66	□□□□□ -0.38
SPIDR-222	ENST00000524006	USP48	Q86UV5	1035 aa		12.66	□□□□□ -0.38
SPIDR-222	ENST00000524006	FLAD1	Q8NFF5	587 aa		12.66	□□□□□ -0.38
SPIDR-222	ENST00000524006	ANKRD2	Q9GZV1	360 aa		12.66	□□□□□ -0.38
SPIDR-222	ENST00000524006	CACNA1S	Q13698	1873 aa		12.65	□□□□□ -0.38
SPIDR-222	ENST00000524006	ZMYM6	O95789	1325 aa		12.65	□□□□□ -0.38
SPIDR-222	ENST00000524006	CPLX1	O14810	134 aa		12.65	□□□□□ -0.38
SPIDR-222	ENST00000524006	MBD4	O95243	580 aa		12.65	□□□□□ -0.38
SPIDR-222	ENST00000524006	UBE4A	Q14139	1066 aa		12.65	□□□□□ -0.38
SPIDR-222	ENST00000524006	SF3B3	Q15393	1217 aa	Known RBP	12.65	□□□□□ -0.38
SPIDR-222	ENST00000524006	TPRN	Q4KMQ1	711 aa		12.65	□□□□□ -0.38
SPIDR-222	ENST00000524006	CCDC183	Q5T5S1	534 aa		12.65	□□□□□ -0.38
SPIDR-222	ENST00000524006	TBC1D9B	Q66K14	1250 aa		12.65	□□□□□ -0.38
SPIDR-222	ENST00000524006	GPT2	Q8TD30	523 aa		12.65	□□□□□ -0.38
SPIDR-222	ENST00000524006	PUS7L	Q9H0K6	701 aa	Known RBP	12.65	□□□□□ -0.38
SPIDR-222	ENST00000524006	GDPD2	Q9HCC8	539 aa		12.65	□□□□□ -0.38
SPIDR-222	ENST00000524006	RAI14	Q9P0K7	980 aa		12.65	□□□□□ -0.38
SPIDR-222	ENST00000524006	RBM27	Q9P2N5	1060 aa	Known RBP	12.65	□□□□□ -0.38
SPIDR-222	ENST00000524006	WWC3	Q9ULE0	1092 aa		12.65	□□□□□ -0.38
SPIDR-222	ENST00000524006	DLEC1	Q9Y238	1755 aa		12.65	□□□□□ -0.38
SPIDR-222	ENST00000524006	PTPDC1	A2A3K4	754 aa		12.64	□□□□□ -0.39
SPIDR-222	ENST00000524006	CDKL5	O76039	1030 aa		12.64	□□□□□ -0.39
SPIDR-222	ENST00000524006	FGA	P02671	866 aa		12.64	□□□□□ -0.39
SPIDR-222	ENST00000524006	XRCC6	P12956	609 aa	Known RBP eCLIP	12.64	□□□□□ -0.39
SPIDR-222	ENST00000524006	ST3GAL1	Q11201	340 aa		12.64	□□□□□ -0.39
SPIDR-222	ENST00000524006	SART3	Q15020	963 aa	Known RBP	12.64	□□□□□ -0.39
SPIDR-222	ENST00000524006	TRAPPC3L	Q5T215	181 aa		12.64	□□□□□ -0.39
SPIDR-222	ENST00000524006	TTLL5	Q6EMB2	1281 aa		12.64	□□□□□ -0.39
SPIDR-222	ENST00000524006	NFXL1	Q6ZNB6	911 aa		12.64	□□□□□ -0.39
SPIDR-222	ENST00000524006	CDC37L1	Q7L3B6	337 aa		12.64	□□□□□ -0.39
SPIDR-222	ENST00000524006	DDX11	Q96FC9	970 aa		12.64	□□□□□ -0.39
SPIDR-222	ENST00000524006	ZNF274	Q96GC6	653 aa	Predicted RBP	12.64	□□□□□ -0.39
SPIDR-222	ENST00000524006	SCAND2P	Q9GZW5	306 aa	Predicted RBP	12.64	□□□□□ -0.39
SPIDR-222	ENST00000524006	TSPY26P	Q9H489	355 aa		12.64	□□□□□ -0.39
SPIDR-222	ENST00000524006	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	12.64	□□□□□ -0.39
SPIDR-222	ENST00000524006	CNNM2	Q9H8M5	875 aa		12.64	□□□□□ -0.39
SPIDR-222	ENST00000524006	BSDC1	Q9NW68	430 aa	Predicted RBP	12.64	□□□□□ -0.39
SPIDR-222	ENST00000524006	SRP68	Q9UHB9	627 aa	Known RBP	12.64	□□□□□ -0.39
SPIDR-222	ENST00000524006	DENND2A	Q9ULE3	1009 aa		12.64	□□□□□ -0.39
SPIDR-222	ENST00000524006	MYH8	P13535	1937 aa		12.64	□□□□□ -0.39
SPIDR-222	ENST00000524006	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.63	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms