RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 DBNLQ9UJU6 430 aaKnown RBP15.4■□□□□ 0.06
VEGFA-225ENST00000523950 AKAP11Q9UKA4 1901 aa15.4■□□□□ 0.06
VEGFA-225ENST00000523950 LDHBP07195 334 aaKnown RBP15.39■□□□□ 0.05
VEGFA-225ENST00000523950 HHIPL2Q6UWX4 724 aa15.39■□□□□ 0.05
VEGFA-225ENST00000523950 AACSQ86V21 672 aa15.39■□□□□ 0.05
VEGFA-225ENST00000523950 SPATA5Q8NB90 893 aa15.39■□□□□ 0.05
VEGFA-225ENST00000523950 LRRCC1Q9C099 1032 aa15.39■□□□□ 0.05
VEGFA-225ENST00000523950 HMG20BQ9P0W2 317 aa15.39■□□□□ 0.05
VEGFA-225ENST00000523950 PCDHB15Q9Y5E8 787 aa15.39■□□□□ 0.05
VEGFA-225ENST00000523950 TRAF5O00463 557 aa15.38■□□□□ 0.05
VEGFA-225ENST00000523950 RBM5P52756 815 aaKnown RBP eCLIP15.38■□□□□ 0.051e-9■□□□□ 9.1
VEGFA-225ENST00000523950 GRIK5Q16478 980 aa15.38■□□□□ 0.05
VEGFA-225ENST00000523950 USP48Q86UV5 1035 aa15.38■□□□□ 0.05
VEGFA-225ENST00000523950 SLF2Q8IX21 1173 aa15.38■□□□□ 0.05
VEGFA-225ENST00000523950 PRMT6Q96LA8 375 aaPredicted RBP15.38■□□□□ 0.05
VEGFA-225ENST00000523950 ZDHHC15Q96MV8 337 aa15.38■□□□□ 0.05
VEGFA-225ENST00000523950 CCDC8Q9H0W5 538 aaPredicted RBP15.38■□□□□ 0.05
VEGFA-225ENST00000523950 IL1RAPL2Q9NP60 686 aa15.38■□□□□ 0.05
VEGFA-225ENST00000523950 PPP2R3BQ9Y5P8 575 aa15.38■□□□□ 0.05
VEGFA-225ENST00000523950 MAST2Q6P0Q8 1798 aa15.38■□□□□ 0.05
VEGFA-225ENST00000523950 ASTN2O75129 1339 aaPredicted RBP15.38■□□□□ 0.05
VEGFA-225ENST00000523950 IFIT2P09913 472 aaKnown RBP15.37■□□□□ 0.05
VEGFA-225ENST00000523950 PRDX5P30044 214 aa15.37■□□□□ 0.05
VEGFA-225ENST00000523950 MCAMP43121 646 aa15.37■□□□□ 0.05
VEGFA-225ENST00000523950 HDAC1Q13547 482 aaPredicted RBP15.37■□□□□ 0.05
VEGFA-225ENST00000523950 MYH2Q9UKX2 1941 aa15.37■□□□□ 0.05
VEGFA-225ENST00000523950 ADM5C9JUS6 153 aa15.36■□□□□ 0.05
VEGFA-225ENST00000523950 APBB1O00213 710 aa15.36■□□□□ 0.05
VEGFA-225ENST00000523950 TNFAIP1Q13829 316 aa15.36■□□□□ 0.05
VEGFA-225ENST00000523950 SPDYE2Q495Y8 402 aa15.36■□□□□ 0.05
VEGFA-225ENST00000523950 ERICH6Q7L0X2 663 aa15.36■□□□□ 0.05
VEGFA-225ENST00000523950 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.36■□□□□ 0.05
VEGFA-225ENST00000523950 TLR7Q9NYK1 1049 aaKnown RBP15.36■□□□□ 0.05
VEGFA-225ENST00000523950 ABCF2Q9UG63 623 aa15.36■□□□□ 0.05
VEGFA-225ENST00000523950 CELF2O95319 508 aaKnown RBP15.35■□□□□ 0.05
VEGFA-225ENST00000523950 DZIP1Q86YF9 867 aaKnown RBP15.35■□□□□ 0.05
VEGFA-225ENST00000523950 CDCA5Q96FF9 252 aa15.35■□□□□ 0.05
VEGFA-225ENST00000523950 PAPPA2Q9BXP8 1791 aa15.34■□□□□ 0.05
VEGFA-225ENST00000523950 TNNI2P48788 182 aa15.34■□□□□ 0.05
VEGFA-225ENST00000523950 FKBP1BP68106 108 aa15.34■□□□□ 0.05
VEGFA-225ENST00000523950 GSTO1P78417 241 aa15.34■□□□□ 0.05
VEGFA-225ENST00000523950 FKBP1CQ5VVH2 108 aa15.34■□□□□ 0.05
VEGFA-225ENST00000523950 CST9Q5W186 159 aa15.34■□□□□ 0.05
VEGFA-225ENST00000523950 TMED8Q6PL24 325 aaPredicted RBP15.34■□□□□ 0.05
VEGFA-225ENST00000523950 GCC1Q96CN9 775 aa15.34■□□□□ 0.05
VEGFA-225ENST00000523950 FAM163AQ96GL9 167 aaPredicted RBP15.34■□□□□ 0.05
VEGFA-225ENST00000523950 TMOD2Q9NZR1 351 aa15.34■□□□□ 0.05
VEGFA-225ENST00000523950 PCDHAC2Q9Y5I4 1007 aa15.34■□□□□ 0.05
VEGFA-225ENST00000523950 GAKO14976 1311 aa15.34■□□□□ 0.05
VEGFA-225ENST00000523950 DOCK2Q92608 1830 aa15.33■□□□□ 0.05
VEGFA-225ENST00000523950 CLRN2A0PK11 232 aa15.33■□□□□ 0.04
VEGFA-225ENST00000523950 LDHCP07864 332 aa15.33■□□□□ 0.04
VEGFA-225ENST00000523950 NF2P35240 595 aa15.33■□□□□ 0.04
VEGFA-225ENST00000523950 FMR1Q06787 632 aaKnown RBP eCLIP15.33■□□□□ 0.04
VEGFA-225ENST00000523950 APOBEC3HQ6NTF7 200 aaKnown RBP15.33■□□□□ 0.04
VEGFA-225ENST00000523950 PI16Q6UXB8 463 aa15.33■□□□□ 0.04
VEGFA-225ENST00000523950 EXOC6Q8TAG9 804 aa15.33■□□□□ 0.04
VEGFA-225ENST00000523950 HHIPL1Q96JK4 782 aa15.33■□□□□ 0.04
VEGFA-225ENST00000523950 TDRD3Q9H7E2 651 aaKnown RBP15.33■□□□□ 0.04
VEGFA-225ENST00000523950 ZNF408Q9H9D4 720 aa15.33■□□□□ 0.04
VEGFA-225ENST00000523950 VEZTQ9HBM0 779 aa15.33■□□□□ 0.04
VEGFA-225ENST00000523950 ZNF70Q9UC06 446 aaPredicted RBP15.33■□□□□ 0.04
VEGFA-225ENST00000523950 DAGLAQ9Y4D2 1042 aa15.33■□□□□ 0.04
VEGFA-225ENST00000523950 TLL2Q9Y6L7 1015 aa15.33■□□□□ 0.04
VEGFA-225ENST00000523950 RASSF10A6NK89 507 aa15.32■□□□□ 0.04
VEGFA-225ENST00000523950 CYP2E1P05181 493 aaPredicted RBP15.32■□□□□ 0.04
VEGFA-225ENST00000523950 ZAP70P43403 619 aa15.32■□□□□ 0.04
VEGFA-225ENST00000523950 DIXDC1Q155Q3 683 aa15.32■□□□□ 0.04
VEGFA-225ENST00000523950 DNAJC5GQ8N7S2 189 aa15.32■□□□□ 0.04
VEGFA-225ENST00000523950 C2orf69Q8N8R5 385 aa15.32■□□□□ 0.04
VEGFA-225ENST00000523950 KLRG1Q96E93 195 aa15.32■□□□□ 0.04
VEGFA-225ENST00000523950 DEFB129Q9H1M3 183 aa15.32■□□□□ 0.04
VEGFA-225ENST00000523950 GBA2Q9HCG7 927 aaPredicted RBP15.32■□□□□ 0.04
VEGFA-225ENST00000523950 LRP2BPQ9P2M1 347 aa15.32■□□□□ 0.04
VEGFA-225ENST00000523950 ABT1Q9ULW3 272 aaKnown RBP15.32■□□□□ 0.04
VEGFA-225ENST00000523950 MROH7-TTC4A0A0A0MT08 1334 aa15.32■□□□□ 0.04
VEGFA-225ENST00000523950 CNTNAP1P78357 1384 aa15.32■□□□□ 0.04
VEGFA-225ENST00000523950 MAP4K4O95819 1239 aaPredicted RBP15.31■□□□□ 0.04
VEGFA-225ENST00000523950 ATP5JP18859 108 aa15.31■□□□□ 0.04
VEGFA-225ENST00000523950 HTRA3P83110 453 aa15.31■□□□□ 0.04
VEGFA-225ENST00000523950 MECOMQ03112 1051 aa15.31■□□□□ 0.04
VEGFA-225ENST00000523950 TTF1Q15361 905 aaPredicted RBP15.31■□□□□ 0.04
VEGFA-225ENST00000523950 SAPCD2Q86UD0 394 aa15.31■□□□□ 0.04
VEGFA-225ENST00000523950 FAM83AQ86UY5 434 aa15.31■□□□□ 0.04
VEGFA-225ENST00000523950 NSUN4Q96CB9 384 aaKnown RBP15.31■□□□□ 0.04
VEGFA-225ENST00000523950 GPATCH3Q96I76 525 aa15.31■□□□□ 0.04
VEGFA-225ENST00000523950 RWDD1Q9H446 243 aaPredicted RBP15.31■□□□□ 0.04
VEGFA-225ENST00000523950 SNRKQ9NRH2 765 aa15.31■□□□□ 0.04
VEGFA-225ENST00000523950 RAI14Q9P0K7 980 aa15.31■□□□□ 0.04
VEGFA-225ENST00000523950 ZBTB47Q9UFB7 747 aaPredicted RBP15.31■□□□□ 0.04
VEGFA-225ENST00000523950 AOX1Q06278 1338 aa15.31■□□□□ 0.04
VEGFA-225ENST00000523950 MYO5AQ9Y4I1 1855 aaKnown RBP15.31■□□□□ 0.04
VEGFA-225ENST00000523950 DEFB115Q30KQ5 88 aa15.3■□□□□ 0.04
VEGFA-225ENST00000523950 SUPT20HL1Q3ZLR7 823 aa15.3■□□□□ 0.04
VEGFA-225ENST00000523950 TBC1D9Q6ZT07 1266 aa15.3■□□□□ 0.04
VEGFA-225ENST00000523950 RPAP1Q9BWH6 1393 aaPredicted RBP15.3■□□□□ 0.04
VEGFA-225ENST00000523950 GPR75-ASB3A0A0A6YYF3 556 aa15.29■□□□□ 0.04
VEGFA-225ENST00000523950 SMARCA5O60264 1052 aaPredicted RBP15.29■□□□□ 0.04
VEGFA-225ENST00000523950 ECE1P42892 770 aa15.29■□□□□ 0.04
VEGFA-225ENST00000523950 RASA3Q14644 834 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms