RNA–Protein interactions for RNA: ENST00000523487.1

RNF130-208, Transcript of ring finger protein 130, human

TSL 3

Gene RNF130, Length 697 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF130-208	ENST00000523487	FBXO46	Q6PJ61	603 aa	Predicted RBP	12.03	□□□□□ -0.48
RNF130-208	ENST00000523487	WNK4	Q96J92	1243 aa		12.03	□□□□□ -0.48
RNF130-208	ENST00000523487	USP44	Q9H0E7	712 aa		12.03	□□□□□ -0.48
RNF130-208	ENST00000523487	TDRD3	Q9H7E2	651 aa	Known RBP	12.03	□□□□□ -0.48
RNF130-208	ENST00000523487	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.03	□□□□□ -0.48
RNF130-208	ENST00000523487	FZD1	Q9UP38	647 aa		12.03	□□□□□ -0.48
RNF130-208	ENST00000523487	HDAC5	Q9UQL6	1122 aa		12.03	□□□□□ -0.48
RNF130-208	ENST00000523487	SUGT1	Q9Y2Z0	365 aa		12.03	□□□□□ -0.48
RNF130-208	ENST00000523487	IFIT1	P09914	478 aa	Known RBP	12.02	□□□□□ -0.49
RNF130-208	ENST00000523487	SLFN5	Q08AF3	891 aa		12.02	□□□□□ -0.49
RNF130-208	ENST00000523487	LRRC24	Q50LG9	513 aa		12.02	□□□□□ -0.49
RNF130-208	ENST00000523487	SSH1	Q8WYL5	1049 aa		12.02	□□□□□ -0.49
RNF130-208	ENST00000523487	HOOK2	Q96ED9	719 aa		12.02	□□□□□ -0.49
RNF130-208	ENST00000523487	CLMN	Q96JQ2	1002 aa		12.02	□□□□□ -0.49
RNF130-208	ENST00000523487	TESPA1	A2RU30	521 aa	Predicted RBP	12.01	□□□□□ -0.49
RNF130-208	ENST00000523487	SOX10	P56693	466 aa		12.01	□□□□□ -0.49
RNF130-208	ENST00000523487	MAP3K9	P80192	1104 aa		12.01	□□□□□ -0.49
RNF130-208	ENST00000523487	ANKRD44	Q8N8A2	993 aa		12.01	□□□□□ -0.49
RNF130-208	ENST00000523487	TEKT1	Q969V4	418 aa		12.01	□□□□□ -0.49
RNF130-208	ENST00000523487	KIF16B	Q96L93	1317 aa		12.01	□□□□□ -0.49
RNF130-208	ENST00000523487	TCP10L2	B9ZVM9	353 aa		12	□□□□□ -0.49
RNF130-208	ENST00000523487	WDHD1	O75717	1129 aa	Predicted RBP	12	□□□□□ -0.49
RNF130-208	ENST00000523487	CT47B1	P0C2W7	299 aa	Predicted RBP	12	□□□□□ -0.49
RNF130-208	ENST00000523487	BCAM	P50895	628 aa		12	□□□□□ -0.49
RNF130-208	ENST00000523487	CHAF1A	Q13111	956 aa	Predicted RBP	12	□□□□□ -0.49
RNF130-208	ENST00000523487	ARHGEF6	Q15052	776 aa		12	□□□□□ -0.49
RNF130-208	ENST00000523487	PUM3	Q15397	648 aa	Known RBP	12	□□□□□ -0.49
RNF130-208	ENST00000523487	FKBP1C	Q5VVH2	108 aa		12	□□□□□ -0.49
RNF130-208	ENST00000523487	INTS3	Q68E01	1043 aa	Known RBP	12	□□□□□ -0.49
RNF130-208	ENST00000523487	ERO1A	Q96HE7	468 aa		12	□□□□□ -0.49
RNF130-208	ENST00000523487	R3HDML	Q9H3Y0	253 aa		12	□□□□□ -0.49
RNF130-208	ENST00000523487	TMOD2	Q9NZR1	351 aa		12	□□□□□ -0.49
RNF130-208	ENST00000523487	FBXO3	Q9UK99	471 aa		12	□□□□□ -0.49
RNF130-208	ENST00000523487	MAST3	O60307	1309 aa		12	□□□□□ -0.49
RNF130-208	ENST00000523487	EYA2	O00167	538 aa		11.99	□□□□□ -0.49
RNF130-208	ENST00000523487	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
RNF130-208	ENST00000523487	DSG3	P32926	999 aa		11.99	□□□□□ -0.49
RNF130-208	ENST00000523487	GTF2A2	P52657	109 aa		11.99	□□□□□ -0.49
RNF130-208	ENST00000523487	HHIPL2	Q6UWX4	724 aa		11.99	□□□□□ -0.49
RNF130-208	ENST00000523487	FAM83A	Q86UY5	434 aa		11.99	□□□□□ -0.49
RNF130-208	ENST00000523487	VGLL2	Q8N8G2	317 aa		11.99	□□□□□ -0.49
RNF130-208	ENST00000523487	WDR66	Q8TBY9	1149 aa		11.99	□□□□□ -0.49
RNF130-208	ENST00000523487	LPIN2	Q92539	896 aa		11.99	□□□□□ -0.49
RNF130-208	ENST00000523487	OPTN	Q96CV9	577 aa		11.99	□□□□□ -0.49
RNF130-208	ENST00000523487	ZDHHC15	Q96MV8	337 aa		11.99	□□□□□ -0.49
RNF130-208	ENST00000523487	TEPSIN	Q96N21	525 aa		11.99	□□□□□ -0.49
RNF130-208	ENST00000523487	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.99	□□□□□ -0.49
RNF130-208	ENST00000523487	CSAD	Q9Y600	493 aa		11.99	□□□□□ -0.49
RNF130-208	ENST00000523487	ZNF646	O15015	1829 aa	Predicted RBP	11.99	□□□□□ -0.49
RNF130-208	ENST00000523487	TNRC18	O15417	2968 aa	Predicted RBP	11.99	□□□□□ -0.49
RNF130-208	ENST00000523487	AOX1	Q06278	1338 aa		11.98	□□□□□ -0.49
RNF130-208	ENST00000523487	SLC5A1	P13866	664 aa		11.98	□□□□□ -0.49
RNF130-208	ENST00000523487	FGFR2	P21802	821 aa		11.98	□□□□□ -0.49
RNF130-208	ENST00000523487	SP3	Q02447	781 aa		11.98	□□□□□ -0.49
RNF130-208	ENST00000523487	POTEH	Q6S545	545 aa		11.98	□□□□□ -0.49
RNF130-208	ENST00000523487	KLHDC4	Q8TBB5	520 aa		11.98	□□□□□ -0.49
RNF130-208	ENST00000523487	TMEM39B	Q9GZU3	492 aa		11.98	□□□□□ -0.49
RNF130-208	ENST00000523487	ELP3	Q9H9T3	547 aa		11.98	□□□□□ -0.49
RNF130-208	ENST00000523487	SMC4	Q9NTJ3	1288 aa		11.98	□□□□□ -0.49
RNF130-208	ENST00000523487	GNL3L	Q9NVN8	582 aa	Known RBP	11.98	□□□□□ -0.49
RNF130-208	ENST00000523487	CEP126	Q9P2H0	1117 aa		11.98	□□□□□ -0.49
RNF130-208	ENST00000523487	TRIM17	Q9Y577	477 aa		11.98	□□□□□ -0.49
RNF130-208	ENST00000523487	UBTFL1	P0CB47	393 aa	Predicted RBP	11.97	□□□□□ -0.49
RNF130-208	ENST00000523487	GJA5	P36382	358 aa		11.97	□□□□□ -0.49
RNF130-208	ENST00000523487	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.97	□□□□□ -0.49
RNF130-208	ENST00000523487	OTOP1	Q7RTM1	612 aa		11.97	□□□□□ -0.49
RNF130-208	ENST00000523487	TRMT2A	Q8IZ69	625 aa	Known RBP	11.97	□□□□□ -0.49
RNF130-208	ENST00000523487	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
RNF130-208	ENST00000523487	MS4A4A	Q96JQ5	239 aa		11.97	□□□□□ -0.49
RNF130-208	ENST00000523487	PTPN18	Q99952	460 aa		11.97	□□□□□ -0.49
RNF130-208	ENST00000523487	API5	Q9BZZ5	524 aa	Known RBP	11.97	□□□□□ -0.49
RNF130-208	ENST00000523487	ZFYVE28	Q9HCC9	887 aa		11.97	□□□□□ -0.49
RNF130-208	ENST00000523487	CIAO1	O76071	339 aa		11.96	□□□□□ -0.49
RNF130-208	ENST00000523487	RFX5	P48382	616 aa	Predicted RBP	11.96	□□□□□ -0.49
RNF130-208	ENST00000523487	CRHR2	Q13324	411 aa		11.96	□□□□□ -0.49
RNF130-208	ENST00000523487	GRIK5	Q16478	980 aa		11.96	□□□□□ -0.49
RNF130-208	ENST00000523487	DCAF15	Q66K64	600 aa		11.96	□□□□□ -0.49
RNF130-208	ENST00000523487	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.96	□□□□□ -0.49
RNF130-208	ENST00000523487	EFCC1	Q9HA90	598 aa		11.96	□□□□□ -0.49
RNF130-208	ENST00000523487	NOB1	Q9ULX3	412 aa	Known RBP	11.96	□□□□□ -0.49
RNF130-208	ENST00000523487	PTPN22	Q9Y2R2	807 aa		11.96	□□□□□ -0.49
RNF130-208	ENST00000523487	SSC5D	A1L4H1	1573 aa		11.96	□□□□□ -0.5
RNF130-208	ENST00000523487	SLC34A2	O95436	690 aa		11.95	□□□□□ -0.5
RNF130-208	ENST00000523487	CETP	P11597	493 aa		11.95	□□□□□ -0.5
RNF130-208	ENST00000523487	IL15	P40933	162 aa	Predicted RBP	11.95	□□□□□ -0.5
RNF130-208	ENST00000523487	VGLL4	Q14135	290 aa		11.95	□□□□□ -0.5
RNF130-208	ENST00000523487	ATG9A	Q7Z3C6	839 aa		11.95	□□□□□ -0.5
RNF130-208	ENST00000523487	ERO1B	Q86YB8	467 aa		11.95	□□□□□ -0.5
RNF130-208	ENST00000523487	FAM151A	Q8WW52	585 aa		11.95	□□□□□ -0.5
RNF130-208	ENST00000523487	CDCA7L	Q96GN5	454 aa		11.95	□□□□□ -0.5
RNF130-208	ENST00000523487	ZCCHC17	Q9NP64	241 aa	Known RBP	11.95	□□□□□ -0.5
RNF130-208	ENST00000523487	CCL15-CCL14	A0A0B4J2E2	113 aa		11.94	□□□□□ -0.5
RNF130-208	ENST00000523487	SEMA3E	O15041	775 aa		11.94	□□□□□ -0.5
RNF130-208	ENST00000523487	ZBTB22	O15209	634 aa		11.94	□□□□□ -0.5
RNF130-208	ENST00000523487	SNAPC2	Q13487	334 aa		11.94	□□□□□ -0.5
RNF130-208	ENST00000523487	TAF1C	Q15572	869 aa	Predicted RBP	11.94	□□□□□ -0.5
RNF130-208	ENST00000523487	CCL15	Q16663	113 aa		11.94	□□□□□ -0.5
RNF130-208	ENST00000523487	NBPF11	Q86T75	865 aa		11.94	□□□□□ -0.5
RNF130-208	ENST00000523487	CD99L2	Q8TCZ2	262 aa		11.94	□□□□□ -0.5
RNF130-208	ENST00000523487	ARHGAP45	Q92619	1136 aa		11.94	□□□□□ -0.5

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