RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 NRG1Q02297 640 aaPredicted RBP10.04□□□□□ -0.8
CPNE3-206ENST00000523469 TPTE2Q6XPS3 522 aa10.04□□□□□ -0.8
CPNE3-206ENST00000523469 TMEM151AQ8N4L1 468 aa10.04□□□□□ -0.8
CPNE3-206ENST00000523469 NECAB3Q96P71 396 aaPredicted RBP10.04□□□□□ -0.8
CPNE3-206ENST00000523469 DDX3YO15523 660 aaKnown RBP10.03□□□□□ -0.8
CPNE3-206ENST00000523469 CYP11A1P05108 521 aa10.03□□□□□ -0.8
CPNE3-206ENST00000523469 AP3B2Q13367 1082 aa10.03□□□□□ -0.8
CPNE3-206ENST00000523469 DUOXA2Q1HG44 320 aa10.03□□□□□ -0.8
CPNE3-206ENST00000523469 USP21Q9UK80 565 aa10.03□□□□□ -0.8
CPNE3-206ENST00000523469 FBXO24O75426 580 aa10.02□□□□□ -0.81
CPNE3-206ENST00000523469 ST13P50502 369 aaKnown RBP10.02□□□□□ -0.81
CPNE3-206ENST00000523469 TAF1CQ15572 869 aaPredicted RBP10.02□□□□□ -0.81
CPNE3-206ENST00000523469 MEI1Q5TIA1 1274 aa10.02□□□□□ -0.81
CPNE3-206ENST00000523469 SV2BQ7L1I2 683 aa10.02□□□□□ -0.81
CPNE3-206ENST00000523469 NRSN2Q9GZP1 204 aa10.02□□□□□ -0.81
CPNE3-206ENST00000523469 ENC1O14682 589 aa10.01□□□□□ -0.81
CPNE3-206ENST00000523469 VAMP1P23763 118 aa10.01□□□□□ -0.81
CPNE3-206ENST00000523469 TMEM130Q8N3G9 435 aa10.01□□□□□ -0.81
CPNE3-206ENST00000523469 TRIM56Q9BRZ2 755 aaKnown RBP10.01□□□□□ -0.81
CPNE3-206ENST00000523469 USP26Q9BXU7 913 aa10.01□□□□□ -0.81
CPNE3-206ENST00000523469 USP31Q70CQ4 1352 aa10.01□□□□□ -0.81
CPNE3-206ENST00000523469 LOC100289279A0A1B0GTE1 492 aa10□□□□□ -0.81
CPNE3-206ENST00000523469 ADGRE1Q14246 886 aa10□□□□□ -0.81
CPNE3-206ENST00000523469 POU4F3Q15319 338 aa10□□□□□ -0.81
CPNE3-206ENST00000523469 UBASH3BQ8TF42 649 aa10□□□□□ -0.81
CPNE3-206ENST00000523469 MRRFQ96E11 262 aaKnown RBP10□□□□□ -0.81
CPNE3-206ENST00000523469 CORO1BQ9BR76 489 aa10□□□□□ -0.81
CPNE3-206ENST00000523469 C1QTNF9BB2RNN3 333 aa9.99□□□□□ -0.81
CPNE3-206ENST00000523469 WISP1O95388 367 aa9.99□□□□□ -0.81
CPNE3-206ENST00000523469 NME2P22392 152 aa9.99□□□□□ -0.81
CPNE3-206ENST00000523469 MAOBP27338 520 aa9.99□□□□□ -0.81
CPNE3-206ENST00000523469 MBTPS1Q14703 1052 aa9.99□□□□□ -0.81
CPNE3-206ENST00000523469 CCDC85BQ15834 202 aaPredicted RBP9.99□□□□□ -0.81
CPNE3-206ENST00000523469 ACAD11Q709F0 780 aa9.99□□□□□ -0.81
CPNE3-206ENST00000523469 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.99□□□□□ -0.81
CPNE3-206ENST00000523469 CD163Q86VB7 1156 aa9.99□□□□□ -0.81
CPNE3-206ENST00000523469 SAMM50Q9Y512 469 aa9.99□□□□□ -0.81
CPNE3-206ENST00000523469 UNCXA6NJT0 531 aa9.98□□□□□ -0.81
CPNE3-206ENST00000523469 F8W735 103 aaPredicted RBP9.98□□□□□ -0.81
CPNE3-206ENST00000523469 CHRNA4P43681 627 aa9.98□□□□□ -0.81
CPNE3-206ENST00000523469 HP1BP3Q5SSJ5 553 aaPredicted RBP9.98□□□□□ -0.81
CPNE3-206ENST00000523469 KIAA1211Q6ZU35 1233 aa9.98□□□□□ -0.81
CPNE3-206ENST00000523469 SULF2Q8IWU5 870 aa9.98□□□□□ -0.81
CPNE3-206ENST00000523469 NOC4LQ9BVI4 516 aaKnown RBP9.98□□□□□ -0.81
CPNE3-206ENST00000523469 AKTIPQ9H8T0 292 aa9.98□□□□□ -0.81
CPNE3-206ENST00000523469 ARNTP27540 789 aa9.97□□□□□ -0.81
CPNE3-206ENST00000523469 PLA2G4EQ3MJ16 856 aa9.97□□□□□ -0.81
CPNE3-206ENST00000523469 RUSC1Q9BVN2 902 aa9.97□□□□□ -0.81
CPNE3-206ENST00000523469 EMILIN2Q9BXX0 1053 aa9.97□□□□□ -0.81
CPNE3-206ENST00000523469 MEGF11A6BM72 1044 aa9.96□□□□□ -0.82
CPNE3-206ENST00000523469 PAGE1O75459 146 aa9.96□□□□□ -0.82
CPNE3-206ENST00000523469 CELA3AP09093 270 aa9.96□□□□□ -0.82
CPNE3-206ENST00000523469 TXNRD3Q86VQ6 643 aa9.96□□□□□ -0.82
CPNE3-206ENST00000523469 WFDC12Q8WWY7 111 aa9.96□□□□□ -0.82
CPNE3-206ENST00000523469 BACH2Q9BYV9 841 aa9.96□□□□□ -0.82
CPNE3-206ENST00000523469 RNF208Q9H0X6 261 aa9.96□□□□□ -0.82
CPNE3-206ENST00000523469 GSTP1P09211 210 aaKnown RBP9.95□□□□□ -0.82
CPNE3-206ENST00000523469 IREB2P48200 963 aaKnown RBP9.95□□□□□ -0.82
CPNE3-206ENST00000523469 TMEM87AQ8NBN3 555 aa9.95□□□□□ -0.82
CPNE3-206ENST00000523469 KIAA1522Q9P206 1035 aaPredicted RBP9.95□□□□□ -0.82
CPNE3-206ENST00000523469 DLGAP3O95886 979 aa9.94□□□□□ -0.82
CPNE3-206ENST00000523469 RLBP1P12271 317 aa9.94□□□□□ -0.82
CPNE3-206ENST00000523469 BMP6P22004 513 aa9.94□□□□□ -0.82
CPNE3-206ENST00000523469 NOS3P29474 1203 aa9.94□□□□□ -0.82
CPNE3-206ENST00000523469 RBM25P49756 843 aaKnown RBP9.94□□□□□ -0.82
CPNE3-206ENST00000523469 HNRNPUQ00839 825 aaKnown RBP eCLIP9.94□□□□□ -0.82
CPNE3-206ENST00000523469 TSNAXIP1Q2TAA8 658 aa9.94□□□□□ -0.82
CPNE3-206ENST00000523469 EXOSC6Q5RKV6 272 aaKnown RBP9.94□□□□□ -0.82
CPNE3-206ENST00000523469 LDLRAD1Q5T700 205 aa9.94□□□□□ -0.82
CPNE3-206ENST00000523469 PDZD3Q86UT5 571 aa9.94□□□□□ -0.82
CPNE3-206ENST00000523469 AGGF1Q8N302 714 aaeCLIP9.94□□□□□ -0.82
CPNE3-206ENST00000523469 STK35Q8TDR2 534 aa9.94□□□□□ -0.82
CPNE3-206ENST00000523469 ZNF428Q96B54 188 aa9.94□□□□□ -0.82
CPNE3-206ENST00000523469 TMPRSS13Q9BYE2 586 aa9.94□□□□□ -0.82
CPNE3-206ENST00000523469 ALX3O95076 343 aa9.93□□□□□ -0.82
CPNE3-206ENST00000523469 ECEL1O95672 775 aa9.93□□□□□ -0.82
CPNE3-206ENST00000523469 ITGB2P05107 769 aa9.93□□□□□ -0.82
CPNE3-206ENST00000523469 CTSBP07858 339 aa9.93□□□□□ -0.82
CPNE3-206ENST00000523469 LRRC14Q15048 493 aa9.93□□□□□ -0.82
CPNE3-206ENST00000523469 PCNX4Q63HM2 1172 aa9.93□□□□□ -0.82
CPNE3-206ENST00000523469 Q6ZS46 218 aa9.93□□□□□ -0.82
CPNE3-206ENST00000523469 CBX8Q9HC52 389 aa9.93□□□□□ -0.82
CPNE3-206ENST00000523469 KRT82Q9NSB4 513 aa9.93□□□□□ -0.82
CPNE3-206ENST00000523469 CYP8B1Q9UNU6 501 aa9.93□□□□□ -0.82
CPNE3-206ENST00000523469 RECKO95980 971 aa9.92□□□□□ -0.82
CPNE3-206ENST00000523469 GATA4P43694 442 aa9.92□□□□□ -0.82
CPNE3-206ENST00000523469 RPS26P62854 115 aaKnown RBP9.92□□□□□ -0.82
CPNE3-206ENST00000523469 ZNF252P-AS1Q0IIN9 211 aa9.92□□□□□ -0.82
CPNE3-206ENST00000523469 PDE3AQ14432 1141 aa9.92□□□□□ -0.82
CPNE3-206ENST00000523469 NUTM2GQ5VZR2 741 aa9.92□□□□□ -0.82
CPNE3-206ENST00000523469 TTBK2Q6IQ55 1244 aa9.92□□□□□ -0.82
CPNE3-206ENST00000523469 KCNB2Q92953 911 aa9.92□□□□□ -0.82
CPNE3-206ENST00000523469 GLB1P16278 677 aa9.91□□□□□ -0.82
CPNE3-206ENST00000523469 ANKRD34AQ69YU3 496 aa9.91□□□□□ -0.82
CPNE3-206ENST00000523469 SCARA3Q6AZY7 606 aa9.91□□□□□ -0.82
CPNE3-206ENST00000523469 LLGL2Q6P1M3 1020 aa9.91□□□□□ -0.82
CPNE3-206ENST00000523469 SMG8Q8ND04 991 aaKnown RBP9.91□□□□□ -0.82
CPNE3-206ENST00000523469 CEP41Q9BYV8 373 aa9.91□□□□□ -0.82
CPNE3-206ENST00000523469 ZC3H12CQ9C0D7 883 aaKnown RBP9.91□□□□□ -0.82
CPNE3-206ENST00000523469 CCDC86Q9H6F5 360 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms