RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 MFSD14BQ5SR56 506 aa14.85□□□□□ -0.03
SDCBP-211ENST00000523441 BIN2Q9UBW5 565 aaPredicted RBP14.85□□□□□ -0.03
SDCBP-211ENST00000523441 IQSEC3Q9UPP2 1182 aaPredicted RBP14.85□□□□□ -0.03
SDCBP-211ENST00000523441 UNCXA6NJT0 531 aa14.84□□□□□ -0.03
SDCBP-211ENST00000523441 IL1R1P14778 569 aa14.84□□□□□ -0.03
SDCBP-211ENST00000523441 GYG1P46976 350 aa14.84□□□□□ -0.03
SDCBP-211ENST00000523441 LACTBP83111 547 aaPredicted RBP14.84□□□□□ -0.03
SDCBP-211ENST00000523441 IFIT5Q13325 482 aaKnown RBP14.84□□□□□ -0.03
SDCBP-211ENST00000523441 FKBP5Q13451 457 aaPredicted RBP14.84□□□□□ -0.03
SDCBP-211ENST00000523441 SPDYE2Q495Y8 402 aa14.84□□□□□ -0.03
SDCBP-211ENST00000523441 ZKSCAN4Q969J2 545 aaPredicted RBP14.84□□□□□ -0.03
SDCBP-211ENST00000523441 MYH16Q9H6N6 1097 aa14.84□□□□□ -0.03
SDCBP-211ENST00000523441 CNNM1Q9NRU3 951 aa14.84□□□□□ -0.03
SDCBP-211ENST00000523441 CPA4Q9UI42 421 aa14.84□□□□□ -0.03
SDCBP-211ENST00000523441 IRS2Q9Y4H2 1338 aa14.84□□□□□ -0.03
SDCBP-211ENST00000523441 AK9Q5TCS8 1911 aa14.84□□□□□ -0.03
SDCBP-211ENST00000523441 CSF1RP07333 972 aa14.83□□□□□ -0.04
SDCBP-211ENST00000523441 TNNI2P48788 182 aa14.83□□□□□ -0.04
SDCBP-211ENST00000523441 CHAF1AQ13111 956 aaPredicted RBP14.83□□□□□ -0.04
SDCBP-211ENST00000523441 DZIP1LQ8IYY4 767 aaKnown RBP14.83□□□□□ -0.04
SDCBP-211ENST00000523441 SHISA4Q96DD7 197 aa14.83□□□□□ -0.04
SDCBP-211ENST00000523441 TEPSINQ96N21 525 aa14.83□□□□□ -0.04
SDCBP-211ENST00000523441 BTBD19C9JJ37 291 aa14.82□□□□□ -0.04
SDCBP-211ENST00000523441 FMNL1O95466 1100 aaPredicted RBP14.82□□□□□ -0.04
SDCBP-211ENST00000523441 CASP7P55210 303 aa14.82□□□□□ -0.04
SDCBP-211ENST00000523441 TWISTNBQ3B726 338 aaPredicted RBP14.82□□□□□ -0.04
SDCBP-211ENST00000523441 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.82□□□□□ -0.04
SDCBP-211ENST00000523441 RAET1EQ8TD07 263 aa14.82□□□□□ -0.04
SDCBP-211ENST00000523441 WRNIP1Q96S55 665 aa14.82□□□□□ -0.04
SDCBP-211ENST00000523441 PLA2G12BQ9BX93 195 aa14.82□□□□□ -0.04
SDCBP-211ENST00000523441 CHMP4AQ9BY43 222 aa14.82□□□□□ -0.04
SDCBP-211ENST00000523441 TLR2O60603 784 aa14.81□□□□□ -0.04
SDCBP-211ENST00000523441 CETPP11597 493 aa14.81□□□□□ -0.04
SDCBP-211ENST00000523441 CRKP46108 304 aa14.81□□□□□ -0.04
SDCBP-211ENST00000523441 FLIIQ13045 1269 aa14.81□□□□□ -0.04
SDCBP-211ENST00000523441 GRIK5Q16478 980 aa14.81□□□□□ -0.04
SDCBP-211ENST00000523441 LMBR1LQ6UX01 489 aa14.81□□□□□ -0.04
SDCBP-211ENST00000523441 LDHAL6AQ6ZMR3 332 aa14.81□□□□□ -0.04
SDCBP-211ENST00000523441 DNAAF4Q8WXU2 420 aa14.81□□□□□ -0.04
SDCBP-211ENST00000523441 IRF6O14896 467 aa14.8□□□□□ -0.04
SDCBP-211ENST00000523441 CCL5P13501 91 aa14.8□□□□□ -0.04
SDCBP-211ENST00000523441 CTGFP29279 349 aa14.8□□□□□ -0.04
SDCBP-211ENST00000523441 PSMC4P43686 418 aa14.8□□□□□ -0.04
SDCBP-211ENST00000523441 FKBP1AP62942 108 aaKnown RBP14.8□□□□□ -0.04
SDCBP-211ENST00000523441 FOXO4P98177 505 aa14.8□□□□□ -0.04
SDCBP-211ENST00000523441 C15orf52Q6ZUT6 534 aaKnown RBP14.8□□□□□ -0.04
SDCBP-211ENST00000523441 SERPINA10Q9UK55 444 aa14.8□□□□□ -0.04
SDCBP-211ENST00000523441 SNCAIPQ9Y6H5 919 aa14.8□□□□□ -0.04
SDCBP-211ENST00000523441 SPDYE5A6NIY4 337 aa14.79□□□□□ -0.04
SDCBP-211ENST00000523441 F6X3S4 739 aa14.79□□□□□ -0.04
SDCBP-211ENST00000523441 FRAT2O75474 233 aaPredicted RBP14.79□□□□□ -0.04
SDCBP-211ENST00000523441 SNAPC2Q13487 334 aa14.79□□□□□ -0.04
SDCBP-211ENST00000523441 CCDC57Q2TAC2 916 aa14.79□□□□□ -0.04
SDCBP-211ENST00000523441 MIGA2Q7L4E1 593 aa14.79□□□□□ -0.04
SDCBP-211ENST00000523441 MYPNQ86TC9 1320 aa14.79□□□□□ -0.04
SDCBP-211ENST00000523441 ERO1BQ86YB8 467 aa14.79□□□□□ -0.04
SDCBP-211ENST00000523441 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.79□□□□□ -0.04
SDCBP-211ENST00000523441 TRIM47Q96LD4 638 aa14.79□□□□□ -0.04
SDCBP-211ENST00000523441 RNF208Q9H0X6 261 aa14.79□□□□□ -0.04
SDCBP-211ENST00000523441 MGAMO43451 1857 aa14.78□□□□□ -0.04
SDCBP-211ENST00000523441 OSBPP22059 807 aa14.78□□□□□ -0.04
SDCBP-211ENST00000523441 HIBADHP31937 336 aaKnown RBP14.78□□□□□ -0.04
SDCBP-211ENST00000523441 GRK4P32298 578 aa14.78□□□□□ -0.04
SDCBP-211ENST00000523441 EPHA10Q5JZY3 1008 aa14.78□□□□□ -0.04
SDCBP-211ENST00000523441 VPS37DQ86XT2 251 aa14.78□□□□□ -0.04
SDCBP-211ENST00000523441 LINS1Q8NG48 757 aa14.78□□□□□ -0.04
SDCBP-211ENST00000523441 LRCH3Q96II8 777 aa14.78□□□□□ -0.04
SDCBP-211ENST00000523441 HTATIP2Q9BUP3 242 aa14.78□□□□□ -0.04
SDCBP-211ENST00000523441 SRRDQ9UH36 339 aa14.78□□□□□ -0.04
SDCBP-211ENST00000523441 RIPOR2Q9Y4F9 1068 aa14.78□□□□□ -0.04
SDCBP-211ENST00000523441 FAM205AQ6ZU69 1335 aa14.77□□□□□ -0.04
SDCBP-211ENST00000523441 RANBP2P49792 3224 aaKnown RBP14.77□□□□□ -0.04
SDCBP-211ENST00000523441 TDRD7Q8NHU6 1098 aaKnown RBP14.77□□□□□ -0.05
SDCBP-211ENST00000523441 PUS3Q9BZE2 481 aaKnown RBP14.77□□□□□ -0.05
SDCBP-211ENST00000523441 TMOD2Q9NZR1 351 aa14.77□□□□□ -0.05
SDCBP-211ENST00000523441 TAOK2Q9UL54 1235 aa14.77□□□□□ -0.05
SDCBP-211ENST00000523441 NR2E3Q9Y5X4 410 aa14.77□□□□□ -0.05
SDCBP-211ENST00000523441 PDHXO00330 501 aa14.76□□□□□ -0.05
SDCBP-211ENST00000523441 SOX1O00570 391 aaPredicted RBP14.76□□□□□ -0.05
SDCBP-211ENST00000523441 FARP2O94887 1054 aaPredicted RBP14.76□□□□□ -0.05
SDCBP-211ENST00000523441 INPP5BP32019 993 aa14.76□□□□□ -0.05
SDCBP-211ENST00000523441 FAM84BQ96KN1 310 aaPredicted RBP14.76□□□□□ -0.05
SDCBP-211ENST00000523441 GNRH1P01148 92 aa14.75□□□□□ -0.05
SDCBP-211ENST00000523441 HOXD10P28358 340 aa14.75□□□□□ -0.05
SDCBP-211ENST00000523441 PRMT2P55345 433 aa14.75□□□□□ -0.05
SDCBP-211ENST00000523441 PRKCZQ05513 592 aa14.75□□□□□ -0.05
SDCBP-211ENST00000523441 PPIL2Q13356 520 aa14.75□□□□□ -0.05
SDCBP-211ENST00000523441 C17orf99Q6UX52 265 aa14.75□□□□□ -0.05
SDCBP-211ENST00000523441 NKX2-3Q8TAU0 364 aa14.75□□□□□ -0.05
SDCBP-211ENST00000523441 TEKT1Q969V4 418 aa14.75□□□□□ -0.05
SDCBP-211ENST00000523441 UNC93B1Q9H1C4 597 aa14.75□□□□□ -0.05
SDCBP-211ENST00000523441 STAP2Q9UGK3 403 aa14.75□□□□□ -0.05
SDCBP-211ENST00000523441 SALL2Q9Y467 1007 aaPredicted RBP14.75□□□□□ -0.05
SDCBP-211ENST00000523441 ZBTB7BO15156 539 aaPredicted RBP14.74□□□□□ -0.05
SDCBP-211ENST00000523441 EVI5O60447 810 aa14.74□□□□□ -0.05
SDCBP-211ENST00000523441 GJA8P48165 433 aa14.74□□□□□ -0.05
SDCBP-211ENST00000523441 UBXN2AP68543 259 aa14.74□□□□□ -0.05
SDCBP-211ENST00000523441 U2AF1L4Q8WU68 220 aaKnown RBP14.74□□□□□ -0.05
SDCBP-211ENST00000523441 GABRQQ9UN88 632 aa14.74□□□□□ -0.05
SDCBP-211ENST00000523441 MYH13Q9UKX3 1938 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms