RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-225ENST00000523288 TXLNAP40222 546 aa4.41□□□□□ -1.7
FAM49B-225ENST00000523288 CCNHP51946 323 aaPredicted RBP4.41□□□□□ -1.7
FAM49B-225ENST00000523288 GNAI1P63096 354 aa4.41□□□□□ -1.7
FAM49B-225ENST00000523288 INTS3Q68E01 1043 aaKnown RBP4.41□□□□□ -1.7
FAM49B-225ENST00000523288 CPLX2Q6PUV4 134 aaKnown RBP4.41□□□□□ -1.7
FAM49B-225ENST00000523288 CRELD2Q6UXH1 353 aaPredicted RBP4.41□□□□□ -1.7
FAM49B-225ENST00000523288 DNAJC14Q6Y2X3 702 aaPredicted RBP4.41□□□□□ -1.7
FAM49B-225ENST00000523288 NPHP3Q7Z494 1330 aa4.41□□□□□ -1.7
FAM49B-225ENST00000523288 SPATA21Q7Z572 469 aa4.41□□□□□ -1.7
FAM49B-225ENST00000523288 TEX9Q8N6V9 391 aa4.41□□□□□ -1.7
FAM49B-225ENST00000523288 CCDC43Q96MW1 224 aaKnown RBP4.41□□□□□ -1.7
FAM49B-225ENST00000523288 INCENPQ9NQS7 918 aa4.41□□□□□ -1.7
FAM49B-225ENST00000523288 WDR37Q9Y2I8 494 aa4.41□□□□□ -1.7
FAM49B-225ENST00000523288 COG6Q9Y2V7 657 aa4.41□□□□□ -1.7
FAM49B-225ENST00000523288 TTC21AQ8NDW8 1320 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 MCM3P25205 808 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 SPTY2D1Q68D10 685 aaPredicted RBP4.4□□□□□ -1.7
FAM49B-225ENST00000523288 SYNE3Q6ZMZ3 975 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 DZIP1LQ8IYY4 767 aaKnown RBP4.4□□□□□ -1.7
FAM49B-225ENST00000523288 C1orf131Q8NDD1 294 aaKnown RBP4.4□□□□□ -1.7
FAM49B-225ENST00000523288 RILPL2Q969X0 211 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 ZNF396Q96N95 335 aaPredicted RBP4.4□□□□□ -1.7
FAM49B-225ENST00000523288 ARFGAP3Q9NP61 516 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 DDX25Q9UHL0 483 aaKnown RBP4.4□□□□□ -1.7
FAM49B-225ENST00000523288 SYCP2Q9BX26 1530 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 OVOS2A0A0G2JMS6 1433 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 OVOS2A0A0J9YW53 1432 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 OVOS2Q6IE36 1432 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 CD109Q6YHK3 1445 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 MGRN1O60291 552 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 MNAT1P51948 309 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 CCT2P78371 535 aaKnown RBP4.4□□□□□ -1.7
FAM49B-225ENST00000523288 ARHGAP29Q52LW3 1261 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 CCDC178Q5BJE1 867 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 MICALCLQ6ZW33 695 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 KLHDC4Q8TBB5 520 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 PANK1Q8TE04 598 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 N4BP2L2Q92802 583 aaPredicted RBP4.4□□□□□ -1.7
FAM49B-225ENST00000523288 PPP1R13BQ96KQ4 1090 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 C16orf45Q96MC5 204 aaPredicted RBP4.4□□□□□ -1.7
FAM49B-225ENST00000523288 C8orf37Q96NL8 207 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 VCPKMTQ9H867 229 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 CTNNAL1Q9UBT7 734 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 CIDEBQ9UHD4 219 aa4.4□□□□□ -1.7
FAM49B-225ENST00000523288 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.4□□□□□ -1.7
FAM49B-225ENST00000523288 NSD3Q9BZ95 1437 aa4.4□□□□□ -1.71
FAM49B-225ENST00000523288 LMAN1P49257 510 aa4.4□□□□□ -1.71
FAM49B-225ENST00000523288 SKOR1P84550 965 aa4.4□□□□□ -1.71
FAM49B-225ENST00000523288 SNW1Q13573 536 aaKnown RBP4.4□□□□□ -1.71
FAM49B-225ENST00000523288 SESTD1Q86VW0 696 aa4.4□□□□□ -1.71
FAM49B-225ENST00000523288 JAKMIP2Q96AA8 810 aa4.4□□□□□ -1.71
FAM49B-225ENST00000523288 CCDC34Q96HJ3 373 aa4.4□□□□□ -1.71
FAM49B-225ENST00000523288 BARX2Q9UMQ3 279 aaPredicted RBP4.4□□□□□ -1.71
FAM49B-225ENST00000523288 ZNF232Q9UNY5 417 aa4.4□□□□□ -1.71
FAM49B-225ENST00000523288 PIK3C2AO00443 1686 aa4.4□□□□□ -1.71
FAM49B-225ENST00000523288 NPHP4O75161 1426 aaPredicted RBP4.4□□□□□ -1.71
FAM49B-225ENST00000523288 H3BQF6 201 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 WDHD1O75717 1129 aaPredicted RBP4.39□□□□□ -1.71
FAM49B-225ENST00000523288 PRPF6O94906 941 aaKnown RBP4.39□□□□□ -1.71
FAM49B-225ENST00000523288 HMGB2P26583 209 aaKnown RBP4.39□□□□□ -1.71
FAM49B-225ENST00000523288 DYNC1I2Q13409 638 aaKnown RBP4.39□□□□□ -1.71
FAM49B-225ENST00000523288 ZNF530Q6P9A1 599 aaPredicted RBP4.39□□□□□ -1.71
FAM49B-225ENST00000523288 CACTIN-AS1Q8N1I8 211 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 GBP7Q8N8V2 638 aaPredicted RBP4.39□□□□□ -1.71
FAM49B-225ENST00000523288 FAM212AQ96EL1 285 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 SAAL1Q96ER3 474 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 ALS2CR12Q96Q35 445 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 CDK19Q9BWU1 502 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 IRX2Q9BZI1 471 aaPredicted RBP4.39□□□□□ -1.71
FAM49B-225ENST00000523288 DDX19AQ9NUU7 478 aaKnown RBP4.39□□□□□ -1.71
FAM49B-225ENST00000523288 RGL1Q9NZL6 768 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 WWC3Q9ULE0 1092 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 SPG7Q9UQ90 795 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 MRFAP1Q9Y605 127 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 BCL9O00512 1426 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 EXOC5O00471 708 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 IFIT2P09913 472 aaKnown RBP4.39□□□□□ -1.71
FAM49B-225ENST00000523288 EPB41P11171 864 aaKnown RBP4.39□□□□□ -1.71
FAM49B-225ENST00000523288 FERP16591 822 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 SYT1P21579 422 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 ROR2Q01974 943 aaKnown RBP4.39□□□□□ -1.71
FAM49B-225ENST00000523288 ACTN3Q08043 901 aaPredicted RBP4.39□□□□□ -1.71
FAM49B-225ENST00000523288 TSNAXIP1Q2TAA8 658 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 RNF214Q8ND24 703 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 FAM81AQ8TBF8 368 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 UBXN4Q92575 508 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 MAF1Q9H063 256 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 EBF2Q9HAK2 575 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 PDRG1Q9NUG6 133 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 ODF2LQ9ULJ1 636 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 GOLGA6CA6NDK9 693 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 GOLGA6BA6NDN3 693 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 SMNDC1O75940 238 aaKnown RBP eCLIP4.39□□□□□ -1.71
FAM49B-225ENST00000523288 VIMP08670 466 aaKnown RBP4.39□□□□□ -1.71
FAM49B-225ENST00000523288 GOLGA6DP0CG33 693 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 HARSP12081 509 aaKnown RBP4.39□□□□□ -1.71
FAM49B-225ENST00000523288 ATP5JP18859 108 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 SH3BGRP55822 239 aaPredicted RBP4.39□□□□□ -1.71
FAM49B-225ENST00000523288 RIPK1Q13546 671 aa4.39□□□□□ -1.71
FAM49B-225ENST00000523288 TTLL12Q14166 644 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms