RNA–Protein interactions for RNA: ENST00000522926.1

TNIP1-216, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 3

Gene TNIP1, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-216ENST00000522926 IL16Q14005 1332 aa23.3■■□□□ 1.32
TNIP1-216ENST00000522926 TCP10L2B9ZVM9 353 aa23.29■■□□□ 1.32
TNIP1-216ENST00000522926 DZIP1LQ8IYY4 767 aaKnown RBP23.29■■□□□ 1.32
TNIP1-216ENST00000522926 SERPINA10Q9UK55 444 aa23.29■■□□□ 1.32
TNIP1-216ENST00000522926 CCL15-CCL14A0A0B4J2E2 113 aa23.28■■□□□ 1.32
TNIP1-216ENST00000522926 CCL15Q16663 113 aa23.28■■□□□ 1.32
TNIP1-216ENST00000522926 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.28■■□□□ 1.32
TNIP1-216ENST00000522926 FAM84BQ96KN1 310 aaPredicted RBP23.28■■□□□ 1.32
TNIP1-216ENST00000522926 PUS3Q9BZE2 481 aaKnown RBP23.28■■□□□ 1.32
TNIP1-216ENST00000522926 CNNM1Q9NRU3 951 aa23.28■■□□□ 1.32
TNIP1-216ENST00000522926 TNFAIP1Q13829 316 aa23.27■■□□□ 1.32
TNIP1-216ENST00000522926 TAF1CQ15572 869 aaPredicted RBP23.27■■□□□ 1.32
TNIP1-216ENST00000522926 CCDC57Q2TAC2 916 aa23.27■■□□□ 1.32
TNIP1-216ENST00000522926 ARHGAP39Q9C0H5 1083 aa23.27■■□□□ 1.32
TNIP1-216ENST00000522926 TRIOBPQ9H2D6 2365 aa23.26■■□□□ 1.31
TNIP1-216ENST00000522926 MYCP01106 439 aaPredicted RBP23.26■■□□□ 1.31
TNIP1-216ENST00000522926 CRKP46108 304 aa23.26■■□□□ 1.31
TNIP1-216ENST00000522926 EXOSC9Q06265 439 aaKnown RBP23.26■■□□□ 1.31
TNIP1-216ENST00000522926 TAF7LQ5H9L4 462 aa23.26■■□□□ 1.31
TNIP1-216ENST00000522926 OTUD5Q96G74 571 aa23.26■■□□□ 1.31
TNIP1-216ENST00000522926 ZSWIM8A7E2V4 1837 aa23.26■■□□□ 1.31
TNIP1-216ENST00000522926 GRM8O00222 908 aa23.25■■□□□ 1.31
TNIP1-216ENST00000522926 HIBADHP31937 336 aaKnown RBP23.25■■□□□ 1.31
TNIP1-216ENST00000522926 CACNB3P54284 484 aa23.25■■□□□ 1.31
TNIP1-216ENST00000522926 MAP3K9P80192 1104 aa23.25■■□□□ 1.31
TNIP1-216ENST00000522926 SLC9C1Q4G0N8 1177 aa23.25■■□□□ 1.31
TNIP1-216ENST00000522926 TMEM106CQ9BVX2 250 aa23.25■■□□□ 1.31
TNIP1-216ENST00000522926 IQSEC3Q9UPP2 1182 aaPredicted RBP23.25■■□□□ 1.31
TNIP1-216ENST00000522926 COLQQ9Y215 455 aaPredicted RBP23.25■■□□□ 1.31
TNIP1-216ENST00000522926 GTF2A2P52657 109 aa23.24■■□□□ 1.31
TNIP1-216ENST00000522926 UBE4AQ14139 1066 aa23.24■■□□□ 1.31
TNIP1-216ENST00000522926 KAZALD1Q96I82 304 aa23.24■■□□□ 1.31
TNIP1-216ENST00000522926 ZFYVE28Q9HCC9 887 aa23.24■■□□□ 1.31
TNIP1-216ENST00000522926 ARAP2Q8WZ64 1704 aa23.23■■□□□ 1.31
TNIP1-216ENST00000522926 SH3TC2Q8TF17 1288 aa23.23■■□□□ 1.31
TNIP1-216ENST00000522926 SPINK5Q9NQ38 1064 aaPredicted RBP23.23■■□□□ 1.31
TNIP1-216ENST00000522926 SALL2Q9Y467 1007 aaPredicted RBP23.23■■□□□ 1.31
TNIP1-216ENST00000522926 SNCAIPQ9Y6H5 919 aa23.23■■□□□ 1.31
TNIP1-216ENST00000522926 CACNA1FO60840 1977 aa23.21■■□□□ 1.31
TNIP1-216ENST00000522926 SPDYE5A6NIY4 337 aa23.21■■□□□ 1.31
TNIP1-216ENST00000522926 SUCLG2Q96I99 432 aa23.21■■□□□ 1.31
TNIP1-216ENST00000522926 RIPOR2Q9Y4F9 1068 aa23.21■■□□□ 1.31
TNIP1-216ENST00000522926 CSADQ9Y600 493 aa23.21■■□□□ 1.31
TNIP1-216ENST00000522926 BTBD19C9JJ37 291 aa23.2■■□□□ 1.3
TNIP1-216ENST00000522926 CHAF1AQ13111 956 aaPredicted RBP23.2■■□□□ 1.3
TNIP1-216ENST00000522926 SLC4A8Q2Y0W8 1093 aa23.2■■□□□ 1.3
TNIP1-216ENST00000522926 FBXO33Q7Z6M2 555 aa23.2■■□□□ 1.3
TNIP1-216ENST00000522926 ZKSCAN4Q969J2 545 aaPredicted RBP23.2■■□□□ 1.3
TNIP1-216ENST00000522926 TLR2O60603 784 aa23.19■■□□□ 1.3
TNIP1-216ENST00000522926 ECM2O94769 699 aaPredicted RBP23.19■■□□□ 1.3
TNIP1-216ENST00000522926 NBPF11Q86T75 865 aa23.19■■□□□ 1.3
TNIP1-216ENST00000522926 C9orf78Q9NZ63 289 aaPredicted RBP23.19■■□□□ 1.3
TNIP1-216ENST00000522926 H0YGN5 161 aa23.18■■□□□ 1.3
TNIP1-216ENST00000522926 IRF6O14896 467 aa23.18■■□□□ 1.3
TNIP1-216ENST00000522926 CTGFP29279 349 aa23.18■■□□□ 1.3
TNIP1-216ENST00000522926 TNNI2P48788 182 aa23.18■■□□□ 1.3
TNIP1-216ENST00000522926 LACTBP83111 547 aaPredicted RBP23.18■■□□□ 1.3
TNIP1-216ENST00000522926 NBPF7P0C2Y1 421 aaPredicted RBP23.17■■□□□ 1.3
TNIP1-216ENST00000522926 LRRC24Q50LG9 513 aa23.17■■□□□ 1.3
TNIP1-216ENST00000522926 NCBP3Q53F19 620 aaKnown RBP23.17■■□□□ 1.3
TNIP1-216ENST00000522926 SLC4A10Q6U841 1118 aa23.17■■□□□ 1.3
TNIP1-216ENST00000522926 WRNIP1Q96S55 665 aa23.17■■□□□ 1.3
TNIP1-216ENST00000522926 ARHGEF6Q15052 776 aa23.16■■□□□ 1.3
TNIP1-216ENST00000522926 WDR63Q8IWG1 891 aa23.16■■□□□ 1.3
TNIP1-216ENST00000522926 ALDH1L1O75891 902 aa23.15■■□□□ 1.3
TNIP1-216ENST00000522926 CETPP11597 493 aa23.15■■□□□ 1.3
TNIP1-216ENST00000522926 MTFR1Q15390 333 aa23.15■■□□□ 1.3
TNIP1-216ENST00000522926 APOBEC3HQ6NTF7 200 aaKnown RBP23.15■■□□□ 1.3
TNIP1-216ENST00000522926 ERO1BQ86YB8 467 aa23.15■■□□□ 1.3
TNIP1-216ENST00000522926 SHISA4Q96DD7 197 aa23.15■■□□□ 1.3
TNIP1-216ENST00000522926 A0A0C4DFX4 3053 aa23.15■■□□□ 1.3
TNIP1-216ENST00000522926 LAMA3Q16787 3333 aa23.15■■□□□ 1.3
TNIP1-216ENST00000522926 HDLBPQ00341 1268 aaKnown RBP23.14■■□□□ 1.29
TNIP1-216ENST00000522926 VGLL2Q8N8G2 317 aa23.14■■□□□ 1.29
TNIP1-216ENST00000522926 TEKT1Q969V4 418 aa23.14■■□□□ 1.29
TNIP1-216ENST00000522926 SRCIN1Q9C0H9 1055 aa23.14■■□□□ 1.29
TNIP1-216ENST00000522926 BICC1Q9H694 974 aaKnown RBP23.14■■□□□ 1.29
TNIP1-216ENST00000522926 MROH5Q6ZUA9 1318 aa23.13■■□□□ 1.29
TNIP1-216ENST00000522926 BCAMP50895 628 aa23.13■■□□□ 1.29
TNIP1-216ENST00000522926 PPIL2Q13356 520 aa23.13■■□□□ 1.29
TNIP1-216ENST00000522926 SNAPC2Q13487 334 aa23.13■■□□□ 1.29
TNIP1-216ENST00000522926 C17orf99Q6UX52 265 aa23.13■■□□□ 1.29
TNIP1-216ENST00000522926 VPS37DQ86XT2 251 aa23.13■■□□□ 1.29
TNIP1-216ENST00000522926 ANKRD44Q8N8A2 993 aa23.13■■□□□ 1.29
TNIP1-216ENST00000522926 ZDHHC15Q96MV8 337 aa23.13■■□□□ 1.29
TNIP1-216ENST00000522926 INPP5BP32019 993 aa23.12■■□□□ 1.29
TNIP1-216ENST00000522926 MIGA2Q7L4E1 593 aa23.12■■□□□ 1.29
TNIP1-216ENST00000522926 FAM83AQ86UY5 434 aa23.12■■□□□ 1.29
TNIP1-216ENST00000522926 KLHDC4Q8TBB5 520 aa23.12■■□□□ 1.29
TNIP1-216ENST00000522926 ZCCHC17Q9NP64 241 aaKnown RBP23.12■■□□□ 1.29
TNIP1-216ENST00000522926 CPA4Q9UI42 421 aa23.12■■□□□ 1.29
TNIP1-216ENST00000522926 COL6A3P12111 3177 aa23.11■■□□□ 1.29
TNIP1-216ENST00000522926 KIF22Q14807 665 aa23.11■■□□□ 1.29
TNIP1-216ENST00000522926 RABL6Q3YEC7 729 aaPredicted RBP23.11■■□□□ 1.29
TNIP1-216ENST00000522926 METTL24Q5JXM2 366 aa23.11■■□□□ 1.29
TNIP1-216ENST00000522926 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.11■■□□□ 1.29
TNIP1-216ENST00000522926 TBC1D22AQ8WUA7 517 aa23.11■■□□□ 1.29
TNIP1-216ENST00000522926 TRIM47Q96LD4 638 aa23.11■■□□□ 1.29
TNIP1-216ENST00000522926 UTYO14607 1347 aa23.1■■□□□ 1.29
TNIP1-216ENST00000522926 ADGRA2Q96PE1 1338 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms