RNA–Protein interactions for RNA: ENST00000522777.1

PCM1-216, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-216ENST00000522777 NUP153P49790 1475 aaKnown RBP9.55□□□□□ -0.88
PCM1-216ENST00000522777 PDE2AO00408 941 aaPredicted RBP9.55□□□□□ -0.88
PCM1-216ENST00000522777 VSIG8P0DPA2 414 aa9.55□□□□□ -0.88
PCM1-216ENST00000522777 PCSK7Q16549 785 aa9.55□□□□□ -0.88
PCM1-216ENST00000522777 SPRED3Q2MJR0 410 aa9.55□□□□□ -0.88
PCM1-216ENST00000522777 DTHD1Q6ZMT9 781 aa9.55□□□□□ -0.88
PCM1-216ENST00000522777 NPAS3Q8IXF0 933 aa9.55□□□□□ -0.88
PCM1-216ENST00000522777 CCSER2Q9H7U1 834 aa9.55□□□□□ -0.88
PCM1-216ENST00000522777 MBIPQ9NS73 344 aa9.55□□□□□ -0.88
PCM1-216ENST00000522777 GGT7Q9UJ14 662 aa9.55□□□□□ -0.88
PCM1-216ENST00000522777 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.55□□□□□ -0.88
PCM1-216ENST00000522777 LTBP4Q8N2S1 1624 aa9.55□□□□□ -0.88
PCM1-216ENST00000522777 ADARB2-AS1A8MUL3 147 aa9.54□□□□□ -0.88
PCM1-216ENST00000522777 EIF2AK2P19525 551 aaKnown RBP9.54□□□□□ -0.88
PCM1-216ENST00000522777 TBC1D8BQ0IIM8 1120 aa9.54□□□□□ -0.88
PCM1-216ENST00000522777 ADAMTSL4Q6UY14 1074 aa9.54□□□□□ -0.88
PCM1-216ENST00000522777 USP48Q86UV5 1035 aa9.54□□□□□ -0.88
PCM1-216ENST00000522777 FCHSD1Q86WN1 690 aa9.54□□□□□ -0.88
PCM1-216ENST00000522777 COPRSQ9NQ92 184 aa9.54□□□□□ -0.88
PCM1-216ENST00000522777 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.54□□□□□ -0.88
PCM1-216ENST00000522777 GHRHP01286 108 aa9.53□□□□□ -0.88
PCM1-216ENST00000522777 ADH6P28332 368 aa9.53□□□□□ -0.88
PCM1-216ENST00000522777 ADH7P40394 386 aa9.53□□□□□ -0.88
PCM1-216ENST00000522777 SREK1Q8WXA9 508 aaKnown RBP9.53□□□□□ -0.88
PCM1-216ENST00000522777 POP1Q99575 1024 aaKnown RBP9.53□□□□□ -0.88
PCM1-216ENST00000522777 ZNF576Q9H609 170 aa9.53□□□□□ -0.88
PCM1-216ENST00000522777 AKAP2Q9Y2D5 859 aa9.53□□□□□ -0.88
PCM1-216ENST00000522777 A0A096LPE4 126 aa9.52□□□□□ -0.89
PCM1-216ENST00000522777 A0A1W2PPZ6 126 aa9.52□□□□□ -0.89
PCM1-216ENST00000522777 FBXO24O75426 580 aa9.52□□□□□ -0.89
PCM1-216ENST00000522777 MAP2K3P46734 347 aa9.52□□□□□ -0.89
PCM1-216ENST00000522777 TNNI2P48788 182 aa9.52□□□□□ -0.89
PCM1-216ENST00000522777 PERM1Q5SV97 790 aa9.52□□□□□ -0.89
PCM1-216ENST00000522777 FAM35AQ86V20 835 aa9.52□□□□□ -0.89
PCM1-216ENST00000522777 ZNF654Q8IZM8 581 aa9.52□□□□□ -0.89
PCM1-216ENST00000522777 TRIM56Q9BRZ2 755 aaKnown RBP9.52□□□□□ -0.89
PCM1-216ENST00000522777 USP35Q9P2H5 1018 aa9.52□□□□□ -0.89
PCM1-216ENST00000522777 PLCH2O75038 1416 aa9.51□□□□□ -0.89
PCM1-216ENST00000522777 CPB1P15086 417 aa9.51□□□□□ -0.89
PCM1-216ENST00000522777 FAAP100Q0VG06 881 aa9.51□□□□□ -0.89
PCM1-216ENST00000522777 CCDC85BQ15834 202 aaPredicted RBP9.51□□□□□ -0.89
PCM1-216ENST00000522777 RNFT1Q5M7Z0 435 aa9.51□□□□□ -0.89
PCM1-216ENST00000522777 EFCAB2Q5VUJ9 269 aa9.51□□□□□ -0.89
PCM1-216ENST00000522777 PLD4Q96BZ4 506 aa9.51□□□□□ -0.89
PCM1-216ENST00000522777 LPIN3Q9BQK8 851 aa9.51□□□□□ -0.89
PCM1-216ENST00000522777 MUC3BQ9H195 1237 aa9.51□□□□□ -0.89
PCM1-216ENST00000522777 SAMD9Q5K651 1589 aa9.5□□□□□ -0.89
PCM1-216ENST00000522777 NCOA1Q15788 1441 aa9.5□□□□□ -0.89
PCM1-216ENST00000522777 TRAPPC8Q9Y2L5 1435 aa9.5□□□□□ -0.89
PCM1-216ENST00000522777 CELA3AP09093 270 aa9.5□□□□□ -0.89
PCM1-216ENST00000522777 RPS26P11Q5JNZ5 115 aaPredicted RBP9.5□□□□□ -0.89
PCM1-216ENST00000522777 TPTE2Q6XPS3 522 aa9.5□□□□□ -0.89
PCM1-216ENST00000522777 SV2BQ7L1I2 683 aa9.5□□□□□ -0.89
PCM1-216ENST00000522777 ASAP3Q8TDY4 903 aa9.5□□□□□ -0.89
PCM1-216ENST00000522777 RSRP1Q9BUV0 290 aa9.5□□□□□ -0.89
PCM1-216ENST00000522777 ZFYVE1Q9HBF4 777 aa9.5□□□□□ -0.89
PCM1-216ENST00000522777 KBTBD4Q9NVX7 518 aa9.5□□□□□ -0.89
PCM1-216ENST00000522777 NEURL1BA8MQ27 555 aa9.49□□□□□ -0.89
PCM1-216ENST00000522777 SMNDC1O75940 238 aaKnown RBP eCLIP9.49□□□□□ -0.89
PCM1-216ENST00000522777 CEP135Q66GS9 1140 aa9.49□□□□□ -0.89
PCM1-216ENST00000522777 SLC43A3Q8NBI5 491 aa9.49□□□□□ -0.89
PCM1-216ENST00000522777 RBSNQ9H1K0 784 aa9.49□□□□□ -0.89
PCM1-216ENST00000522777 CAPN10Q9HC96 672 aa9.49□□□□□ -0.89
PCM1-216ENST00000522777 SEC31BQ9NQW1 1179 aa9.49□□□□□ -0.89
PCM1-216ENST00000522777 FRRS1LQ9P0K9 344 aa9.49□□□□□ -0.89
PCM1-216ENST00000522777 GGA1Q9UJY5 639 aa9.49□□□□□ -0.89
PCM1-216ENST00000522777 SETD1BQ9UPS6 1966 aaKnown RBP9.49□□□□□ -0.89
PCM1-216ENST00000522777 ERBB4Q15303 1308 aa9.49□□□□□ -0.89
PCM1-216ENST00000522777 ZNF335Q9H4Z2 1342 aaPredicted RBP9.49□□□□□ -0.89
PCM1-216ENST00000522777 ELOA3CA0A087WX78 387 aaPredicted RBP9.48□□□□□ -0.89
PCM1-216ENST00000522777 ELOA3DA6NLF2 546 aaPredicted RBP9.48□□□□□ -0.89
PCM1-216ENST00000522777 ENC1O14682 589 aa9.48□□□□□ -0.89
PCM1-216ENST00000522777 ELOA3BQ3SY89 546 aa9.48□□□□□ -0.89
PCM1-216ENST00000522777 AFAP1Q8N556 730 aa9.48□□□□□ -0.89
PCM1-216ENST00000522777 ELOA3Q8NG57 546 aa9.48□□□□□ -0.89
PCM1-216ENST00000522777 NECAB3Q96P71 396 aaPredicted RBP9.48□□□□□ -0.89
PCM1-216ENST00000522777 COL25A1Q9BXS0 654 aaPredicted RBP9.48□□□□□ -0.89
PCM1-216ENST00000522777 CEP44Q9C0F1 390 aa9.48□□□□□ -0.89
PCM1-216ENST00000522777 SMG9Q9H0W8 520 aaKnown RBP9.48□□□□□ -0.89
PCM1-216ENST00000522777 SOX13Q9UN79 622 aa9.48□□□□□ -0.89
PCM1-216ENST00000522777 NSFL1CQ9UNZ2 370 aaKnown RBP9.48□□□□□ -0.89
PCM1-216ENST00000522777 F6X3S4 739 aa9.47□□□□□ -0.89
PCM1-216ENST00000522777 KRT76Q01546 638 aa9.47□□□□□ -0.89
PCM1-216ENST00000522777 SLCO4C1Q6ZQN7 724 aa9.47□□□□□ -0.89
PCM1-216ENST00000522777 VN1R5Q7Z5H4 357 aa9.47□□□□□ -0.89
PCM1-216ENST00000522777 BSNDQ8WZ55 320 aa9.47□□□□□ -0.89
PCM1-216ENST00000522777 DRC1Q96MC2 740 aa9.47□□□□□ -0.89
PCM1-216ENST00000522777 ADAM19Q9H013 955 aa9.47□□□□□ -0.89
PCM1-216ENST00000522777 TRIM33Q9UPN9 1127 aa9.47□□□□□ -0.89
PCM1-216ENST00000522777 ZNF518AQ6AHZ1 1483 aa9.47□□□□□ -0.89
PCM1-216ENST00000522777 HSPA1LP34931 641 aa9.46□□□□□ -0.9
PCM1-216ENST00000522777 GJA8P48165 433 aa9.46□□□□□ -0.9
PCM1-216ENST00000522777 NFX1Q12986 1120 aaKnown RBP9.46□□□□□ -0.9
PCM1-216ENST00000522777 SF3A1Q15459 793 aaKnown RBP9.46□□□□□ -0.9
PCM1-216ENST00000522777 ELMSAN1Q6PJG2 1045 aa9.46□□□□□ -0.9
PCM1-216ENST00000522777 RHOVQ96L33 236 aa9.46□□□□□ -0.9
PCM1-216ENST00000522777 CLEC4MQ9H2X3 399 aaPredicted RBP9.46□□□□□ -0.9
PCM1-216ENST00000522777 STARD13Q9Y3M8 1113 aa9.46□□□□□ -0.9
PCM1-216ENST00000522777 TERTO14746 1132 aaKnown RBP9.45□□□□□ -0.9
PCM1-216ENST00000522777 PAGE1O75459 146 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms