RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 AOC3Q16853 763 aa15.74■□□□□ 0.11
CPNE3-205ENST00000522240 SPTY2D1Q68D10 685 aaPredicted RBP15.74■□□□□ 0.11
CPNE3-205ENST00000522240 CWC27Q6UX04 472 aaKnown RBP15.74■□□□□ 0.11
CPNE3-205ENST00000522240 TAOK3Q9H2K8 898 aa15.74■□□□□ 0.11
CPNE3-205ENST00000522240 G3V3G9 751 aa15.73■□□□□ 0.11
CPNE3-205ENST00000522240 SEC24BO95487 1268 aa15.73■□□□□ 0.11
CPNE3-205ENST00000522240 PDE6AP16499 860 aa15.73■□□□□ 0.11
CPNE3-205ENST00000522240 MFAP1P55081 439 aaKnown RBP15.73■□□□□ 0.11
CPNE3-205ENST00000522240 DCAF8Q5TAQ9 597 aa15.73■□□□□ 0.11
CPNE3-205ENST00000522240 FAM227BQ96M60 508 aa15.73■□□□□ 0.11
CPNE3-205ENST00000522240 LRP2BPQ9P2M1 347 aa15.73■□□□□ 0.11
CPNE3-205ENST00000522240 WWC3Q9ULE0 1092 aa15.73■□□□□ 0.11
CPNE3-205ENST00000522240 SUGT1Q9Y2Z0 365 aa15.73■□□□□ 0.11
CPNE3-205ENST00000522240 TCRBV5S4A2TA0A5A2 114 aa15.72■□□□□ 0.11
CPNE3-205ENST00000522240 NFKBIEO00221 500 aa15.72■□□□□ 0.11
CPNE3-205ENST00000522240 ECE2O60344 883 aa15.72■□□□□ 0.11
CPNE3-205ENST00000522240 IARSP41252 1262 aaKnown RBP15.72■□□□□ 0.11
CPNE3-205ENST00000522240 FKBP1AP62942 108 aaKnown RBP15.72■□□□□ 0.11
CPNE3-205ENST00000522240 MCMDC2Q4G0Z9 681 aa15.72■□□□□ 0.11
CPNE3-205ENST00000522240 SLC9C2Q5TAH2 1124 aa15.72■□□□□ 0.11
CPNE3-205ENST00000522240 ERICH6Q7L0X2 663 aa15.72■□□□□ 0.11
CPNE3-205ENST00000522240 IL25Q9H293 177 aa15.72■□□□□ 0.11
CPNE3-205ENST00000522240 ABCF2Q9UG63 623 aa15.72■□□□□ 0.11
CPNE3-205ENST00000522240 SCN9AQ15858 1988 aa15.72■□□□□ 0.11
CPNE3-205ENST00000522240 COL4A5P29400 1685 aa15.72■□□□□ 0.11
CPNE3-205ENST00000522240 MAST3O60307 1309 aa15.71■□□□□ 0.11
CPNE3-205ENST00000522240 CCDC171Q6TFL3 1326 aa15.71■□□□□ 0.11
CPNE3-205ENST00000522240 DOK7Q18PE1 504 aa15.71■□□□□ 0.11
CPNE3-205ENST00000522240 LARGE2Q8N3Y3 721 aa15.71■□□□□ 0.11
CPNE3-205ENST00000522240 SPDYE1Q8NFV5 336 aaPredicted RBP15.71■□□□□ 0.11
CPNE3-205ENST00000522240 DBNDD1Q9H9R9 158 aa15.71■□□□□ 0.11
CPNE3-205ENST00000522240 GPBP1L1Q9HC44 474 aaPredicted RBP15.71■□□□□ 0.11
CPNE3-205ENST00000522240 TSHZ2Q9NRE2 1034 aa15.71■□□□□ 0.11
CPNE3-205ENST00000522240 ZNF277Q9NRM2 450 aaPredicted RBP15.71■□□□□ 0.11
CPNE3-205ENST00000522240 RAI14Q9P0K7 980 aa15.71■□□□□ 0.11
CPNE3-205ENST00000522240 ZNF532Q9HCE3 1301 aa15.7■□□□□ 0.1
CPNE3-205ENST00000522240 LDHBP07195 334 aaKnown RBP15.7■□□□□ 0.1
CPNE3-205ENST00000522240 PRDX5P30044 214 aa15.7■□□□□ 0.1
CPNE3-205ENST00000522240 GTF2IP78347 998 aa15.7■□□□□ 0.1
CPNE3-205ENST00000522240 MFSD14BQ5SR56 506 aa15.7■□□□□ 0.1
CPNE3-205ENST00000522240 STRIP1Q5VSL9 837 aa15.7■□□□□ 0.1
CPNE3-205ENST00000522240 MAGEB6Q8N7X4 407 aa15.7■□□□□ 0.1
CPNE3-205ENST00000522240 OSBP2Q969R2 916 aa15.7■□□□□ 0.1
CPNE3-205ENST00000522240 ANO2Q9NQ90 1003 aa15.7■□□□□ 0.1
CPNE3-205ENST00000522240 CHGBP05060 677 aa15.69■□□□□ 0.1
CPNE3-205ENST00000522240 NAA16Q6N069 864 aaPredicted RBP15.69■□□□□ 0.1
CPNE3-205ENST00000522240 KIAA1211Q6ZU35 1233 aa15.69■□□□□ 0.1
CPNE3-205ENST00000522240 ZNF589Q86UQ0 364 aaPredicted RBP15.69■□□□□ 0.1
CPNE3-205ENST00000522240 DZIP1Q86YF9 867 aaKnown RBP15.69■□□□□ 0.1
CPNE3-205ENST00000522240 NIM1KQ8IY84 436 aa15.69■□□□□ 0.1
CPNE3-205ENST00000522240 NSUN4Q96CB9 384 aaKnown RBP15.69■□□□□ 0.1
CPNE3-205ENST00000522240 TBC1D32Q96NH3 1257 aa15.69■□□□□ 0.1
CPNE3-205ENST00000522240 LSG1Q9H089 658 aaKnown RBP15.69■□□□□ 0.1
CPNE3-205ENST00000522240 USP17L3A6NCW0 530 aa15.68■□□□□ 0.1
CPNE3-205ENST00000522240 USP17L4A6NCW7 530 aa15.68■□□□□ 0.1
CPNE3-205ENST00000522240 M0R2C6 588 aa15.68■□□□□ 0.1
CPNE3-205ENST00000522240 GSTO1P78417 241 aa15.68■□□□□ 0.1
CPNE3-205ENST00000522240 MECOMQ03112 1051 aa15.68■□□□□ 0.1
CPNE3-205ENST00000522240 TTLL5Q6EMB2 1281 aa15.68■□□□□ 0.1
CPNE3-205ENST00000522240 USP17L1Q7RTZ2 530 aa15.68■□□□□ 0.1
CPNE3-205ENST00000522240 SEC62Q99442 399 aaKnown RBP15.68■□□□□ 0.1
CPNE3-205ENST00000522240 USP26Q9BXU7 913 aa15.68■□□□□ 0.1
CPNE3-205ENST00000522240 JAG2Q9Y219 1238 aa15.68■□□□□ 0.1
CPNE3-205ENST00000522240 DICER1Q9UPY3 1922 aaKnown RBP15.68■□□□□ 0.1
CPNE3-205ENST00000522240 MYO3BQ8WXR4 1341 aa15.68■□□□□ 0.1
CPNE3-205ENST00000522240 YDJCA8MPS7 323 aa15.67■□□□□ 0.1
CPNE3-205ENST00000522240 CYP7A1P22680 504 aa15.67■□□□□ 0.1
CPNE3-205ENST00000522240 RBM25P49756 843 aaKnown RBP15.67■□□□□ 0.1
CPNE3-205ENST00000522240 RASSF7Q02833 373 aa15.67■□□□□ 0.1
CPNE3-205ENST00000522240 DACT2Q5SW24 774 aa15.67■□□□□ 0.1
CPNE3-205ENST00000522240 IFFO2Q5TF58 517 aa15.67■□□□□ 0.1
CPNE3-205ENST00000522240 PAXIP1Q6ZW49 1069 aaPredicted RBP15.67■□□□□ 0.1
CPNE3-205ENST00000522240 SLF2Q8IX21 1173 aa15.67■□□□□ 0.1
CPNE3-205ENST00000522240 ZNF384Q8TF68 577 aa15.67■□□□□ 0.1
CPNE3-205ENST00000522240 DSCC1Q9BVC3 393 aa15.67■□□□□ 0.1
CPNE3-205ENST00000522240 PUS7LQ9H0K6 701 aaKnown RBP15.67■□□□□ 0.1
CPNE3-205ENST00000522240 GPAA1O43292 621 aa15.66■□□□□ 0.1
CPNE3-205ENST00000522240 LDHCP07864 332 aa15.66■□□□□ 0.1
CPNE3-205ENST00000522240 MCCP23508 829 aa15.66■□□□□ 0.1
CPNE3-205ENST00000522240 SLFNL1Q499Z3 407 aa15.66■□□□□ 0.1
CPNE3-205ENST00000522240 CERS3Q8IU89 383 aa15.66■□□□□ 0.1
CPNE3-205ENST00000522240 FBXW7Q969H0 707 aa15.66■□□□□ 0.1
CPNE3-205ENST00000522240 AIDAQ96BJ3 306 aa15.66■□□□□ 0.1
CPNE3-205ENST00000522240 C22orf23Q9BZE7 217 aa15.66■□□□□ 0.1
CPNE3-205ENST00000522240 ZNRF3Q9ULT6 936 aa15.66■□□□□ 0.1
CPNE3-205ENST00000522240 MYH2Q9UKX2 1941 aa15.66■□□□□ 0.1
CPNE3-205ENST00000522240 MROH7-TTC4A0A0A0MT08 1334 aa15.66■□□□□ 0.1
CPNE3-205ENST00000522240 RPAP1Q9BWH6 1393 aaPredicted RBP15.65■□□□□ 0.1
CPNE3-205ENST00000522240 HSPA6P17066 643 aa15.65■□□□□ 0.1
CPNE3-205ENST00000522240 GNAT2P19087 354 aa15.65■□□□□ 0.1
CPNE3-205ENST00000522240 GRIK5Q16478 980 aa15.65■□□□□ 0.1
CPNE3-205ENST00000522240 CCDC129Q6ZRS4 1044 aa15.65■□□□□ 0.1
CPNE3-205ENST00000522240 CERS5Q8N5B7 392 aa15.65■□□□□ 0.1
CPNE3-205ENST00000522240 JDP2Q8WYK2 163 aa15.65■□□□□ 0.1
CPNE3-205ENST00000522240 MAP4K1Q92918 833 aa15.65■□□□□ 0.1
CPNE3-205ENST00000522240 FAM163AQ96GL9 167 aaPredicted RBP15.65■□□□□ 0.1
CPNE3-205ENST00000522240 LAMA4Q16363 1823 aa15.65■□□□□ 0.1
CPNE3-205ENST00000522240 TIAM2Q8IVF5 1701 aa15.65■□□□□ 0.1
CPNE3-205ENST00000522240 GAKO14976 1311 aa15.65■□□□□ 0.1
CPNE3-205ENST00000522240 ZMYM6O95789 1325 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms