RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 PHKA1P46020 1223 aa8.36□□□□□ -1.07
SPIDR-218ENST00000522222 ATP8B2P98198 1209 aa8.36□□□□□ -1.07
SPIDR-218ENST00000522222 GRIK5Q16478 980 aa8.36□□□□□ -1.07
SPIDR-218ENST00000522222 NBPF9Q3BBW0 867 aa8.36□□□□□ -1.07
SPIDR-218ENST00000522222 CDC37L1Q7L3B6 337 aa8.36□□□□□ -1.07
SPIDR-218ENST00000522222 USP48Q86UV5 1035 aa8.36□□□□□ -1.07
SPIDR-218ENST00000522222 SULF1Q8IWU6 871 aa8.36□□□□□ -1.07
SPIDR-218ENST00000522222 DCPSQ96C86 337 aaKnown RBP8.36□□□□□ -1.07
SPIDR-218ENST00000522222 ZBED3Q96IU2 234 aaPredicted RBP8.36□□□□□ -1.07
SPIDR-218ENST00000522222 ZNF408Q9H9D4 720 aa8.36□□□□□ -1.07
SPIDR-218ENST00000522222 MKRN1Q9UHC7 482 aaKnown RBP8.36□□□□□ -1.07
SPIDR-218ENST00000522222 HDAC9Q9UKV0 1011 aa8.36□□□□□ -1.07
SPIDR-218ENST00000522222 ABT1Q9ULW3 272 aaKnown RBP8.36□□□□□ -1.07
SPIDR-218ENST00000522222 PCDHAC2Q9Y5I4 1007 aa8.36□□□□□ -1.07
SPIDR-218ENST00000522222 POLR2AP24928 1970 aaKnown RBP8.35□□□□□ -1.07
SPIDR-218ENST00000522222 A0A1B0GUL7 405 aa8.35□□□□□ -1.07
SPIDR-218ENST00000522222 POTEMA6NI47 508 aa8.35□□□□□ -1.07
SPIDR-218ENST00000522222 MMP14P50281 582 aa8.35□□□□□ -1.07
SPIDR-218ENST00000522222 G3BP1Q13283 466 aaKnown RBP eCLIP8.35□□□□□ -1.07
SPIDR-218ENST00000522222 OS9Q13438 667 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-218ENST00000522222 NBR1Q14596 966 aa8.35□□□□□ -1.07
SPIDR-218ENST00000522222 CFAP100Q494V2 611 aa8.35□□□□□ -1.07
SPIDR-218ENST00000522222 CST9Q5W186 159 aa8.35□□□□□ -1.07
SPIDR-218ENST00000522222 CDCA5Q96FF9 252 aa8.35□□□□□ -1.07
SPIDR-218ENST00000522222 ZBTB40Q9NUA8 1239 aa8.35□□□□□ -1.07
SPIDR-218ENST00000522222 TTF2Q9UNY4 1162 aaKnown RBP8.35□□□□□ -1.07
SPIDR-218ENST00000522222 SCAF8Q9UPN6 1271 aaKnown RBP8.35□□□□□ -1.07
SPIDR-218ENST00000522222 AKAP2Q9Y2D5 859 aa8.35□□□□□ -1.07
SPIDR-218ENST00000522222 PAPPA2Q9BXP8 1791 aa8.35□□□□□ -1.07
SPIDR-218ENST00000522222 CLRN2A0PK11 232 aa8.34□□□□□ -1.07
SPIDR-218ENST00000522222 SPDYE2BA6NHP3 402 aa8.34□□□□□ -1.07
SPIDR-218ENST00000522222 RASSF10A6NK89 507 aa8.34□□□□□ -1.07
SPIDR-218ENST00000522222 SURF6O75683 361 aaKnown RBP8.34□□□□□ -1.07
SPIDR-218ENST00000522222 SPDYE6P0CI01 402 aa8.34□□□□□ -1.07
SPIDR-218ENST00000522222 TIMM10P62072 90 aa8.34□□□□□ -1.07
SPIDR-218ENST00000522222 RASGRF1Q13972 1273 aa8.34□□□□□ -1.07
SPIDR-218ENST00000522222 DLGAP5Q15398 846 aa8.34□□□□□ -1.07
SPIDR-218ENST00000522222 CCDC102BQ68D86 513 aa8.34□□□□□ -1.07
SPIDR-218ENST00000522222 APOBEC3FQ8IUX4 373 aaKnown RBP8.34□□□□□ -1.07
SPIDR-218ENST00000522222 MTMR14Q8NCE2 650 aa8.34□□□□□ -1.07
SPIDR-218ENST00000522222 TBC1D22AQ8WUA7 517 aa8.34□□□□□ -1.07
SPIDR-218ENST00000522222 XAGE2Q96GT9 111 aa8.34□□□□□ -1.07
SPIDR-218ENST00000522222 UPF2Q9HAU5 1272 aaKnown RBP8.34□□□□□ -1.07
SPIDR-218ENST00000522222 GNL3LQ9NVN8 582 aaKnown RBP8.34□□□□□ -1.07
SPIDR-218ENST00000522222 TLL2Q9Y6L7 1015 aa8.34□□□□□ -1.07
SPIDR-218ENST00000522222 SSC5DA1L4H1 1573 aa8.33□□□□□ -1.08
SPIDR-218ENST00000522222 SEMA3EO15041 775 aa8.33□□□□□ -1.08
SPIDR-218ENST00000522222 CRKP46108 304 aa8.33□□□□□ -1.08
SPIDR-218ENST00000522222 RBM5P52756 815 aaKnown RBP eCLIP8.33□□□□□ -1.08
SPIDR-218ENST00000522222 BECN1Q14457 450 aa8.33□□□□□ -1.08
SPIDR-218ENST00000522222 TNNI3KQ59H18 835 aa8.33□□□□□ -1.08
SPIDR-218ENST00000522222 SIRT2Q8IXJ6 389 aa8.33□□□□□ -1.08
SPIDR-218ENST00000522222 JMYQ8N9B5 988 aa8.33□□□□□ -1.08
SPIDR-218ENST00000522222 WDR66Q8TBY9 1149 aa8.33□□□□□ -1.08
SPIDR-218ENST00000522222 CHMP4BQ9H444 224 aaKnown RBP8.33□□□□□ -1.08
SPIDR-218ENST00000522222 SERPINA10Q9UK55 444 aa8.33□□□□□ -1.08
SPIDR-218ENST00000522222 DENND2AQ9ULE3 1009 aa8.33□□□□□ -1.08
SPIDR-218ENST00000522222 EXOC6BQ9Y2D4 811 aa8.33□□□□□ -1.08
SPIDR-218ENST00000522222 FPGT-TNNI3KV9GXZ4 949 aa8.33□□□□□ -1.08
SPIDR-218ENST00000522222 MAST2Q6P0Q8 1798 aa8.33□□□□□ -1.08
SPIDR-218ENST00000522222 MAST3O60307 1309 aa8.32□□□□□ -1.08
SPIDR-218ENST00000522222 PDS5AQ29RF7 1337 aaKnown RBP8.32□□□□□ -1.08
SPIDR-218ENST00000522222 SALL1Q9NSC2 1324 aa8.32□□□□□ -1.08
SPIDR-218ENST00000522222 ARID4AP29374 1257 aaPredicted RBP8.32□□□□□ -1.08
SPIDR-218ENST00000522222 PRDX5P30044 214 aa8.32□□□□□ -1.08
SPIDR-218ENST00000522222 VEGFBP49765 207 aa8.32□□□□□ -1.08
SPIDR-218ENST00000522222 SPDYE2Q495Y8 402 aa8.32□□□□□ -1.08
SPIDR-218ENST00000522222 C8orf34Q49A92 452 aa8.32□□□□□ -1.08
SPIDR-218ENST00000522222 PRAMEF18Q5VWM3 479 aa8.32□□□□□ -1.08
SPIDR-218ENST00000522222 PI16Q6UXB8 463 aa8.32□□□□□ -1.08
SPIDR-218ENST00000522222 PAXIP1Q6ZW49 1069 aaPredicted RBP8.32□□□□□ -1.08
SPIDR-218ENST00000522222 SAPCD2Q86UD0 394 aa8.32□□□□□ -1.08
SPIDR-218ENST00000522222 TEKT1Q969V4 418 aa8.32□□□□□ -1.08
SPIDR-218ENST00000522222 PRMT6Q96LA8 375 aaPredicted RBP8.32□□□□□ -1.08
SPIDR-218ENST00000522222 NEUROD6Q96NK8 337 aa8.32□□□□□ -1.08
SPIDR-218ENST00000522222 DBNDD2Q9BQY9 259 aa8.32□□□□□ -1.08
SPIDR-218ENST00000522222 RWDD1Q9H446 243 aaPredicted RBP8.32□□□□□ -1.08
SPIDR-218ENST00000522222 VEZTQ9HBM0 779 aa8.32□□□□□ -1.08
SPIDR-218ENST00000522222 GBA2Q9HCG7 927 aaPredicted RBP8.32□□□□□ -1.08
SPIDR-218ENST00000522222 GPR108Q9NPR9 543 aa8.32□□□□□ -1.08
SPIDR-218ENST00000522222 TLR7Q9NYK1 1049 aaKnown RBP8.32□□□□□ -1.08
SPIDR-218ENST00000522222 SUGT1Q9Y2Z0 365 aa8.32□□□□□ -1.08
SPIDR-218ENST00000522222 MYO1BO43795 1136 aa8.31□□□□□ -1.08
SPIDR-218ENST00000522222 EIF5BO60841 1220 aaKnown RBP8.31□□□□□ -1.08
SPIDR-218ENST00000522222 HMMRO75330 724 aa8.31□□□□□ -1.08
SPIDR-218ENST00000522222 HUNKP57058 714 aa8.31□□□□□ -1.08
SPIDR-218ENST00000522222 HDLBPQ00341 1268 aaKnown RBP8.31□□□□□ -1.08
SPIDR-218ENST00000522222 DIXDC1Q155Q3 683 aa8.31□□□□□ -1.08
SPIDR-218ENST00000522222 DEFB115Q30KQ5 88 aa8.31□□□□□ -1.08
SPIDR-218ENST00000522222 GORABQ5T7V8 394 aa8.31□□□□□ -1.08
SPIDR-218ENST00000522222 CYP4F22Q6NT55 531 aa8.31□□□□□ -1.08
SPIDR-218ENST00000522222 ERC1Q8IUD2 1116 aa8.31□□□□□ -1.08
SPIDR-218ENST00000522222 RPAP2Q8IXW5 612 aaPredicted RBP8.31□□□□□ -1.08
SPIDR-218ENST00000522222 CAPNS2Q96L46 248 aa8.31□□□□□ -1.08
SPIDR-218ENST00000522222 ZDHHC15Q96MV8 337 aa8.31□□□□□ -1.08
SPIDR-218ENST00000522222 TDRD3Q9H7E2 651 aaKnown RBP8.31□□□□□ -1.08
SPIDR-218ENST00000522222 ZNF70Q9UC06 446 aaPredicted RBP8.31□□□□□ -1.08
SPIDR-218ENST00000522222 DBNLQ9UJU6 430 aaKnown RBP8.31□□□□□ -1.08
SPIDR-218ENST00000522222 DAGLAQ9Y4D2 1042 aa8.31□□□□□ -1.08
SPIDR-218ENST00000522222 APBB1O00213 710 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms