RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 ZFYP08048 801 aaPredicted RBP16.15■□□□□ 0.18
CLK4-210ENST00000522136 CYP7A1P22680 504 aa16.15■□□□□ 0.18
CLK4-210ENST00000522136 SPTY2D1Q68D10 685 aaPredicted RBP16.15■□□□□ 0.18
CLK4-210ENST00000522136 ZSCAN25Q6NSZ9 544 aa16.15■□□□□ 0.18
CLK4-210ENST00000522136 ADGRA1Q86SQ6 560 aa16.15■□□□□ 0.18
CLK4-210ENST00000522136 NSUN4Q96CB9 384 aaKnown RBP16.15■□□□□ 0.18
CLK4-210ENST00000522136 M0R2C6 588 aa16.14■□□□□ 0.17
CLK4-210ENST00000522136 SGSM2O43147 1006 aa16.14■□□□□ 0.17
CLK4-210ENST00000522136 LMNB1P20700 586 aa16.14■□□□□ 0.17
CLK4-210ENST00000522136 MFAP1P55081 439 aaKnown RBP16.14■□□□□ 0.17
CLK4-210ENST00000522136 CXCL9Q07325 125 aa16.14■□□□□ 0.17
CLK4-210ENST00000522136 LRRFIP1Q32MZ4 808 aaKnown RBP16.14■□□□□ 0.17
CLK4-210ENST00000522136 ZNF589Q86UQ0 364 aaPredicted RBP16.14■□□□□ 0.17
CLK4-210ENST00000522136 DZIP1Q86YF9 867 aaKnown RBP16.14■□□□□ 0.17
CLK4-210ENST00000522136 PUS7LQ9H0K6 701 aaKnown RBP16.14■□□□□ 0.17
CLK4-210ENST00000522136 UBE3CQ15386 1083 aa16.13■□□□□ 0.17
CLK4-210ENST00000522136 DIXDC1Q155Q3 683 aa16.13■□□□□ 0.17
CLK4-210ENST00000522136 NAA16Q6N069 864 aaPredicted RBP16.13■□□□□ 0.17
CLK4-210ENST00000522136 RUFY2Q8WXA3 655 aa16.13■□□□□ 0.17
CLK4-210ENST00000522136 APPBP2Q92624 585 aa16.13■□□□□ 0.17
CLK4-210ENST00000522136 DICER1Q9UPY3 1922 aaKnown RBP16.13■□□□□ 0.17
CLK4-210ENST00000522136 MYH2Q9UKX2 1941 aa16.13■□□□□ 0.17
CLK4-210ENST00000522136 MAST3O60307 1309 aa16.13■□□□□ 0.17
CLK4-210ENST00000522136 MCMDC2Q4G0Z9 681 aa16.13■□□□□ 0.17
CLK4-210ENST00000522136 VIL1P09327 827 aaKnown RBP16.12■□□□□ 0.17
CLK4-210ENST00000522136 TICAM2Q86XR7 235 aa16.12■□□□□ 0.17
CLK4-210ENST00000522136 KIAA0825Q8IV33 1275 aa16.12■□□□□ 0.17
CLK4-210ENST00000522136 MIGA1Q8NAN2 632 aa16.12■□□□□ 0.17
CLK4-210ENST00000522136 HELLSQ9NRZ9 838 aa16.12■□□□□ 0.17
CLK4-210ENST00000522136 ZBTB12Q9Y330 459 aaPredicted RBP16.12■□□□□ 0.17
CLK4-210ENST00000522136 UTRNP46939 3433 aa16.12■□□□□ 0.17
CLK4-210ENST00000522136 SCNN1DP51172 638 aa16.11■□□□□ 0.17
CLK4-210ENST00000522136 CIAPIN1Q6FI81 312 aa16.11■□□□□ 0.17
CLK4-210ENST00000522136 RNF181Q9P0P0 153 aa16.11■□□□□ 0.17
CLK4-210ENST00000522136 TTF2Q9UNY4 1162 aaKnown RBP16.11■□□□□ 0.17
CLK4-210ENST00000522136 MAST2Q6P0Q8 1798 aa16.11■□□□□ 0.17
CLK4-210ENST00000522136 FZD9O00144 591 aa16.11■□□□□ 0.17
CLK4-210ENST00000522136 FKBP1AP62942 108 aaKnown RBP16.11■□□□□ 0.17
CLK4-210ENST00000522136 RSBN1LQ6PCB5 846 aaPredicted RBP16.11■□□□□ 0.17
CLK4-210ENST00000522136 ZNF541Q9H0D2 1346 aa16.1■□□□□ 0.17
CLK4-210ENST00000522136 DYNLL1P63167 89 aaKnown RBP16.1■□□□□ 0.17
CLK4-210ENST00000522136 C9orf131Q5VYM1 1079 aa16.1■□□□□ 0.17
CLK4-210ENST00000522136 ANO2Q9NQ90 1003 aa16.1■□□□□ 0.17
CLK4-210ENST00000522136 SUGT1Q9Y2Z0 365 aa16.1■□□□□ 0.17
CLK4-210ENST00000522136 ADAMTSL1Q8N6G6 1762 aa16.1■□□□□ 0.17
CLK4-210ENST00000522136 GRIN3BO60391 1043 aa16.09■□□□□ 0.17
CLK4-210ENST00000522136 PTH1RQ03431 593 aa16.09■□□□□ 0.17
CLK4-210ENST00000522136 ARMT1Q9H993 441 aa16.09■□□□□ 0.17
CLK4-210ENST00000522136 CCDC171Q6TFL3 1326 aa16.09■□□□□ 0.17
CLK4-210ENST00000522136 RAD50Q92878 1312 aa16.09■□□□□ 0.17
CLK4-210ENST00000522136 GPAA1O43292 621 aa16.09■□□□□ 0.17
CLK4-210ENST00000522136 MBD4O95243 580 aa16.09■□□□□ 0.17
CLK4-210ENST00000522136 EIF6P56537 245 aaKnown RBP16.09■□□□□ 0.17
CLK4-210ENST00000522136 VPS53Q5VIR6 699 aa16.09■□□□□ 0.17
CLK4-210ENST00000522136 GMLQ99445 158 aa16.09■□□□□ 0.17
CLK4-210ENST00000522136 GJA3Q9Y6H8 435 aa16.09■□□□□ 0.17
CLK4-210ENST00000522136 GSTO1P78417 241 aa16.08■□□□□ 0.16
CLK4-210ENST00000522136 TNIP1Q15025 636 aa16.08■□□□□ 0.16
CLK4-210ENST00000522136 LCORLQ8N3X6 602 aa16.08■□□□□ 0.16
CLK4-210ENST00000522136 AIDAQ96BJ3 306 aa16.08■□□□□ 0.16
CLK4-210ENST00000522136 LSG1Q9H089 658 aaKnown RBP16.08■□□□□ 0.16
CLK4-210ENST00000522136 AATFQ9NY61 560 aaKnown RBP eCLIP16.08■□□□□ 0.16
CLK4-210ENST00000522136 PCDHAC2Q9Y5I4 1007 aa16.08■□□□□ 0.16
CLK4-210ENST00000522136 MROH7-TTC4A0A0A0MT08 1334 aa16.08■□□□□ 0.16
CLK4-210ENST00000522136 MAGEB6P1A0A0J9YX57 407 aa16.07■□□□□ 0.16
CLK4-210ENST00000522136 REC8O95072 547 aa16.07■□□□□ 0.16
CLK4-210ENST00000522136 KIAA1211Q6ZU35 1233 aa16.07■□□□□ 0.16
CLK4-210ENST00000522136 STRBPQ96SI9 672 aaKnown RBP16.07■□□□□ 0.16
CLK4-210ENST00000522136 LDHCP07864 332 aa16.07■□□□□ 0.16
CLK4-210ENST00000522136 RIOK1Q9BRS2 568 aaKnown RBP16.07■□□□□ 0.16
CLK4-210ENST00000522136 USP26Q9BXU7 913 aa16.07■□□□□ 0.16
CLK4-210ENST00000522136 DAGLAQ9Y4D2 1042 aa16.07■□□□□ 0.16
CLK4-210ENST00000522136 TIAM2Q8IVF5 1701 aa16.07■□□□□ 0.16
CLK4-210ENST00000522136 SHTN1A0MZ66 631 aa16.06■□□□□ 0.16
CLK4-210ENST00000522136 FOXP2O15409 715 aa16.06■□□□□ 0.16
CLK4-210ENST00000522136 PRKAB2O43741 272 aa16.06■□□□□ 0.16
CLK4-210ENST00000522136 CRKP46108 304 aa16.06■□□□□ 0.16
CLK4-210ENST00000522136 MYO3BQ8WXR4 1341 aa16.06■□□□□ 0.16
CLK4-210ENST00000522136 IGSF3O75054 1194 aa16.06■□□□□ 0.16
CLK4-210ENST00000522136 BTDP43251 543 aa16.06■□□□□ 0.16
CLK4-210ENST00000522136 SLF2Q8IX21 1173 aa16.06■□□□□ 0.16
CLK4-210ENST00000522136 AGBL3Q8NEM8 1001 aa16.06■□□□□ 0.16
CLK4-210ENST00000522136 FAM163AQ96GL9 167 aaPredicted RBP16.06■□□□□ 0.16
CLK4-210ENST00000522136 GAKO14976 1311 aa16.05■□□□□ 0.16
CLK4-210ENST00000522136 GPR75-ASB3A0A0A6YYF3 556 aa16.05■□□□□ 0.16
CLK4-210ENST00000522136 HSPD1P10809 573 aaKnown RBP16.05■□□□□ 0.16
CLK4-210ENST00000522136 GMPSP49915 693 aaPredicted RBP16.05■□□□□ 0.16
CLK4-210ENST00000522136 RBM5P52756 815 aaKnown RBP eCLIP16.05■□□□□ 0.16
CLK4-210ENST00000522136 TEKT1Q969V4 418 aa16.05■□□□□ 0.16
CLK4-210ENST00000522136 TMED8Q6PL24 325 aaPredicted RBP16.04■□□□□ 0.16
CLK4-210ENST00000522136 HHIPL2Q6UWX4 724 aa16.04■□□□□ 0.16
CLK4-210ENST00000522136 SH3RF3Q8TEJ3 882 aaPredicted RBP16.04■□□□□ 0.16
CLK4-210ENST00000522136 USP17L8P0C7I0 530 aa16.04■□□□□ 0.16
CLK4-210ENST00000522136 SDR42E1Q8WUS8 393 aa16.04■□□□□ 0.16
CLK4-210ENST00000522136 MAP4K1Q92918 833 aa16.04■□□□□ 0.16
CLK4-210ENST00000522136 SLC4A4Q9Y6R1 1079 aa16.04■□□□□ 0.16
CLK4-210ENST00000522136 DDNO94850 711 aaPredicted RBP16.03■□□□□ 0.16
CLK4-210ENST00000522136 BAG3O95817 575 aa16.03■□□□□ 0.16
CLK4-210ENST00000522136 APPP05067 770 aa16.03■□□□□ 0.16
CLK4-210ENST00000522136 PPP4CP60510 307 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms