RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 BEGAINQ9BUH8 593 aa10.47□□□□□ -0.73
VPS13B-210ENST00000521932 KDM4CQ9H3R0 1056 aa10.47□□□□□ -0.73
VPS13B-210ENST00000521932 DDX19BQ9UMR2 479 aa10.47□□□□□ -0.73
VPS13B-210ENST00000521932 COG6Q9Y2V7 657 aa10.47□□□□□ -0.73
VPS13B-210ENST00000521932 NPR1P16066 1061 aa10.46□□□□□ -0.73
VPS13B-210ENST00000521932 CHRNA5P30532 468 aa10.46□□□□□ -0.73
VPS13B-210ENST00000521932 ALDH1B1P30837 517 aa10.46□□□□□ -0.73
VPS13B-210ENST00000521932 CTSWP56202 376 aa10.46□□□□□ -0.73
VPS13B-210ENST00000521932 RABL6Q3YEC7 729 aaPredicted RBP10.46□□□□□ -0.73
VPS13B-210ENST00000521932 STYK1Q6J9G0 422 aa10.46□□□□□ -0.73
VPS13B-210ENST00000521932 C2CD5Q86YS7 1000 aa10.46□□□□□ -0.73
VPS13B-210ENST00000521932 NLGN2Q8NFZ4 835 aa10.46□□□□□ -0.73
VPS13B-210ENST00000521932 CRAMP1Q96RY5 1269 aa10.46□□□□□ -0.73
VPS13B-210ENST00000521932 CHMP4BQ9H444 224 aaKnown RBP10.46□□□□□ -0.73
VPS13B-210ENST00000521932 ZBTB40Q9NUA8 1239 aa10.46□□□□□ -0.73
VPS13B-210ENST00000521932 PKD2L1Q9P0L9 805 aa10.46□□□□□ -0.73
VPS13B-210ENST00000521932 DDX60Q8IY21 1712 aaKnown RBP10.46□□□□□ -0.74
VPS13B-210ENST00000521932 ANKRD31Q8N7Z5 1873 aa10.46□□□□□ -0.74
VPS13B-210ENST00000521932 KIAA1551Q9HCM1 1747 aa10.45□□□□□ -0.74
VPS13B-210ENST00000521932 RTL9Q8NET4 1388 aa10.45□□□□□ -0.74
VPS13B-210ENST00000521932 FDX1P10109 184 aa10.45□□□□□ -0.74
VPS13B-210ENST00000521932 CCDC152Q4G0S7 254 aa10.45□□□□□ -0.74
VPS13B-210ENST00000521932 EPHA10Q5JZY3 1008 aa10.45□□□□□ -0.74
VPS13B-210ENST00000521932 LMBR1LQ6UX01 489 aa10.45□□□□□ -0.74
VPS13B-210ENST00000521932 RPGRQ92834 1020 aaKnown RBP10.45□□□□□ -0.74
VPS13B-210ENST00000521932 RBM17Q96I25 401 aaKnown RBP10.45□□□□□ -0.74
VPS13B-210ENST00000521932 BICC1Q9H694 974 aaKnown RBP10.45□□□□□ -0.74
VPS13B-210ENST00000521932 PIM2Q9P1W9 311 aa10.45□□□□□ -0.74
VPS13B-210ENST00000521932 TNRC6CQ9HCJ0 1690 aaKnown RBP10.44□□□□□ -0.74
VPS13B-210ENST00000521932 TNFRSF10AO00220 468 aa10.44□□□□□ -0.74
VPS13B-210ENST00000521932 BBOX1O75936 387 aa10.44□□□□□ -0.74
VPS13B-210ENST00000521932 GNAI2P04899 355 aa10.44□□□□□ -0.74
VPS13B-210ENST00000521932 RPIAP49247 311 aa10.44□□□□□ -0.74
VPS13B-210ENST00000521932 PRR20EP86478 221 aa10.44□□□□□ -0.74
VPS13B-210ENST00000521932 PRR20CP86479 221 aa10.44□□□□□ -0.74
VPS13B-210ENST00000521932 PRR20DP86480 221 aa10.44□□□□□ -0.74
VPS13B-210ENST00000521932 PRR20BP86481 221 aa10.44□□□□□ -0.74
VPS13B-210ENST00000521932 PRR20AP86496 221 aa10.44□□□□□ -0.74
VPS13B-210ENST00000521932 MTX1Q13505 466 aa10.44□□□□□ -0.74
VPS13B-210ENST00000521932 ANKRD44Q8N8A2 993 aa10.44□□□□□ -0.74
VPS13B-210ENST00000521932 CNKSR1Q969H4 720 aa10.44□□□□□ -0.74
VPS13B-210ENST00000521932 GREM2Q9H772 168 aa10.44□□□□□ -0.74
VPS13B-210ENST00000521932 LAMB2P55268 1798 aa10.44□□□□□ -0.74
VPS13B-210ENST00000521932 ITGA6P23229 1130 aa10.43□□□□□ -0.74
VPS13B-210ENST00000521932 DDX46Q7L014 1031 aaKnown RBP10.43□□□□□ -0.74
VPS13B-210ENST00000521932 TTLL6Q8N841 843 aa10.43□□□□□ -0.74
VPS13B-210ENST00000521932 C7orf43Q8WVR3 580 aa10.43□□□□□ -0.74
VPS13B-210ENST00000521932 ZNF622Q969S3 477 aaKnown RBP eCLIP10.43□□□□□ -0.74
VPS13B-210ENST00000521932 LRRFIP2Q9Y608 721 aaKnown RBP10.43□□□□□ -0.74
VPS13B-210ENST00000521932 RPS8P62241 208 aaKnown RBP10.42□□□□□ -0.74
VPS13B-210ENST00000521932 IFIT5Q13325 482 aaKnown RBP10.42□□□□□ -0.74
VPS13B-210ENST00000521932 GRAPQ13588 217 aa10.42□□□□□ -0.74
VPS13B-210ENST00000521932 AAMPQ13685 434 aa10.42□□□□□ -0.74
VPS13B-210ENST00000521932 CCDC57Q2TAC2 916 aa10.42□□□□□ -0.74
VPS13B-210ENST00000521932 DALRD3Q5D0E6 543 aaKnown RBP10.42□□□□□ -0.74
VPS13B-210ENST00000521932 TRAF7Q6Q0C0 670 aa10.42□□□□□ -0.74
VPS13B-210ENST00000521932 IL27Q8NEV9 243 aa10.42□□□□□ -0.74
VPS13B-210ENST00000521932 GRAPLQ8TC17 118 aaPredicted RBP10.42□□□□□ -0.74
VPS13B-210ENST00000521932 TBC1D2Q9BYX2 928 aa10.42□□□□□ -0.74
VPS13B-210ENST00000521932 SEC31BQ9NQW1 1179 aa10.42□□□□□ -0.74
VPS13B-210ENST00000521932 UTRNP46939 3433 aa10.42□□□□□ -0.74
VPS13B-210ENST00000521932 ANKRD18BA2A2Z9 1011 aa10.41□□□□□ -0.74
VPS13B-210ENST00000521932 ATP8B2P98198 1209 aa10.41□□□□□ -0.74
VPS13B-210ENST00000521932 PRPF40BQ6NWY9 871 aaKnown RBP10.41□□□□□ -0.74
VPS13B-210ENST00000521932 TMC4Q7Z404 712 aa10.41□□□□□ -0.74
VPS13B-210ENST00000521932 RETREG3Q86VR2 466 aa10.41□□□□□ -0.74
VPS13B-210ENST00000521932 RPAP2Q8IXW5 612 aaPredicted RBP10.41□□□□□ -0.74
VPS13B-210ENST00000521932 CELF1Q92879 486 aaKnown RBP10.41□□□□□ -0.74
VPS13B-210ENST00000521932 CCDC85AQ96PX6 553 aaPredicted RBP10.41□□□□□ -0.74
VPS13B-210ENST00000521932 CRBNQ96SW2 442 aa10.41□□□□□ -0.74
VPS13B-210ENST00000521932 CDC5LQ99459 802 aaKnown RBP10.41□□□□□ -0.74
VPS13B-210ENST00000521932 BSDC1Q9NW68 430 aaPredicted RBP10.41□□□□□ -0.74
VPS13B-210ENST00000521932 DLEC1Q9Y238 1755 aa10.41□□□□□ -0.74
VPS13B-210ENST00000521932 COL11A2P13942 1736 aaPredicted RBP10.41□□□□□ -0.74
VPS13B-210ENST00000521932 MYH3P11055 1940 aa10.41□□□□□ -0.74
VPS13B-210ENST00000521932 BRCA1P38398 1863 aaKnown RBP10.4□□□□□ -0.74
VPS13B-210ENST00000521932 JUNDP17535 347 aa10.4□□□□□ -0.74
VPS13B-210ENST00000521932 RFX5P48382 616 aaPredicted RBP10.4□□□□□ -0.74
VPS13B-210ENST00000521932 ANKRD18AQ8IVF6 992 aa10.4□□□□□ -0.74
VPS13B-210ENST00000521932 SP8Q8IXZ3 490 aa10.4□□□□□ -0.74
VPS13B-210ENST00000521932 BCS1LQ9Y276 419 aa10.4□□□□□ -0.74
VPS13B-210ENST00000521932 ATP6V0A2Q9Y487 856 aa10.4□□□□□ -0.74
VPS13B-210ENST00000521932 PNMA6EA0A0J9YXQ4 647 aa10.39□□□□□ -0.75
VPS13B-210ENST00000521932 C6orf229H3BNL8 230 aa10.39□□□□□ -0.75
VPS13B-210ENST00000521932 SRGAP3O43295 1099 aa10.39□□□□□ -0.75
VPS13B-210ENST00000521932 PTPN12Q05209 780 aaKnown RBP10.39□□□□□ -0.75
VPS13B-210ENST00000521932 FOXC1Q12948 553 aa10.39□□□□□ -0.75
VPS13B-210ENST00000521932 CC2D2BQ6DHV5 1058 aa10.39□□□□□ -0.75
VPS13B-210ENST00000521932 CEP85Q6P2H3 762 aa10.39□□□□□ -0.75
VPS13B-210ENST00000521932 SSH3Q8TE77 659 aa10.39□□□□□ -0.75
VPS13B-210ENST00000521932 C1orf115Q9H7X2 142 aa10.39□□□□□ -0.75
VPS13B-210ENST00000521932 CHMP3Q9Y3E7 222 aa10.39□□□□□ -0.75
VPS13B-210ENST00000521932 C21orf2O43822 256 aa10.38□□□□□ -0.75
VPS13B-210ENST00000521932 YBX3P16989 372 aaKnown RBP eCLIP10.38□□□□□ -0.75
VPS13B-210ENST00000521932 IGHMBP2P38935 993 aaKnown RBP10.38□□□□□ -0.75
VPS13B-210ENST00000521932 SOGA3Q5TF21 947 aa10.38□□□□□ -0.75
VPS13B-210ENST00000521932 RSBN1LQ6PCB5 846 aaPredicted RBP10.38□□□□□ -0.75
VPS13B-210ENST00000521932 LDHAL6AQ6ZMR3 332 aa10.38□□□□□ -0.75
VPS13B-210ENST00000521932 SIRT2Q8IXJ6 389 aa10.38□□□□□ -0.75
VPS13B-210ENST00000521932 ZNF594Q96JF6 807 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms