RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 A0A1W2PP55 124 aa9.87□□□□□ -0.83
SPIDR-215ENST00000521798 MINDY4BA8MYZ0 360 aa9.87□□□□□ -0.83
SPIDR-215ENST00000521798 SPINT1O43278 529 aa9.87□□□□□ -0.83
SPIDR-215ENST00000521798 KLF4O43474 513 aa9.87□□□□□ -0.83
SPIDR-215ENST00000521798 CES1P23141 567 aa9.87□□□□□ -0.83
SPIDR-215ENST00000521798 ETFBP38117 255 aa9.87□□□□□ -0.83
SPIDR-215ENST00000521798 IGBP1P78318 339 aa9.87□□□□□ -0.83
SPIDR-215ENST00000521798 SPRYD7Q5W111 196 aa9.87□□□□□ -0.83
SPIDR-215ENST00000521798 ZNF296Q8WUU4 475 aaPredicted RBP9.87□□□□□ -0.83
SPIDR-215ENST00000521798 SRPK1Q96SB4 655 aaKnown RBP9.87□□□□□ -0.83
SPIDR-215ENST00000521798 NT5C1AQ9BXI3 368 aa9.87□□□□□ -0.83
SPIDR-215ENST00000521798 TRIM55Q9BYV6 548 aa9.87□□□□□ -0.83
SPIDR-215ENST00000521798 RPRD2Q5VT52 1461 aaKnown RBP9.86□□□□□ -0.83
SPIDR-215ENST00000521798 STRCQ7RTU9 1775 aa9.86□□□□□ -0.83
SPIDR-215ENST00000521798 CFAP65Q6ZU64 1925 aaKnown RBP9.86□□□□□ -0.83
SPIDR-215ENST00000521798 F6X3S4 739 aa9.86□□□□□ -0.83
SPIDR-215ENST00000521798 RAB11FIP3O75154 756 aa9.86□□□□□ -0.83
SPIDR-215ENST00000521798 FCGRTP55899 365 aa9.86□□□□□ -0.83
SPIDR-215ENST00000521798 RAB33AQ14088 237 aa9.86□□□□□ -0.83
SPIDR-215ENST00000521798 CTC1Q2NKJ3 1217 aa9.86□□□□□ -0.83
SPIDR-215ENST00000521798 WDR44Q5JSH3 913 aa9.86□□□□□ -0.83
SPIDR-215ENST00000521798 RNF187Q5TA31 235 aaPredicted RBP9.86□□□□□ -0.83
SPIDR-215ENST00000521798 RHOVQ96L33 236 aa9.86□□□□□ -0.83
SPIDR-215ENST00000521798 TSEN34Q9BSV6 310 aaKnown RBP9.86□□□□□ -0.83
SPIDR-215ENST00000521798 POLMQ9NP87 494 aaPredicted RBP9.86□□□□□ -0.83
SPIDR-215ENST00000521798 MRVI1Q9Y6F6 885 aa9.86□□□□□ -0.83
SPIDR-215ENST00000521798 PLA2R1Q13018 1463 aa9.85□□□□□ -0.83
SPIDR-215ENST00000521798 SYNMO15061 1565 aa9.85□□□□□ -0.83
SPIDR-215ENST00000521798 UGGT1Q9NYU2 1555 aa9.85□□□□□ -0.83
SPIDR-215ENST00000521798 EDN3P14138 238 aa9.85□□□□□ -0.83
SPIDR-215ENST00000521798 IBSPP21815 317 aaPredicted RBP9.85□□□□□ -0.83
SPIDR-215ENST00000521798 ARSJQ5FYB0 599 aaPredicted RBP9.85□□□□□ -0.83
SPIDR-215ENST00000521798 TTC39BQ5VTQ0 682 aaPredicted RBP9.85□□□□□ -0.83
SPIDR-215ENST00000521798 SV2BQ7L1I2 683 aa9.85□□□□□ -0.83
SPIDR-215ENST00000521798 RNPC3Q96LT9 517 aaKnown RBP9.85□□□□□ -0.83
SPIDR-215ENST00000521798 OXCT2Q9BYC2 517 aaPredicted RBP9.85□□□□□ -0.83
SPIDR-215ENST00000521798 LATS2Q9NRM7 1088 aa9.85□□□□□ -0.83
SPIDR-215ENST00000521798 PKD2L1Q9P0L9 805 aa9.85□□□□□ -0.83
SPIDR-215ENST00000521798 U2SURPO15042 1029 aaKnown RBP9.84□□□□□ -0.83
SPIDR-215ENST00000521798 POU4F2Q12837 409 aa9.84□□□□□ -0.83
SPIDR-215ENST00000521798 ZNF697Q5TEC3 545 aa9.84□□□□□ -0.83
SPIDR-215ENST00000521798 PEAR1Q5VY43 1037 aaPredicted RBP9.84□□□□□ -0.83
SPIDR-215ENST00000521798 ZCRB1Q8TBF4 217 aaKnown RBP9.84□□□□□ -0.83
SPIDR-215ENST00000521798 MICAL1Q8TDZ2 1067 aa9.84□□□□□ -0.83
SPIDR-215ENST00000521798 CEP63Q96MT8 703 aa9.84□□□□□ -0.83
SPIDR-215ENST00000521798 ABCB6Q9NP58 842 aa9.84□□□□□ -0.83
SPIDR-215ENST00000521798 SNTG2Q9NY99 539 aa9.84□□□□□ -0.83
SPIDR-215ENST00000521798 SUPT16HQ9Y5B9 1047 aaKnown RBP9.84□□□□□ -0.83
SPIDR-215ENST00000521798 E9PCH4 1651 aa9.83□□□□□ -0.84
SPIDR-215ENST00000521798 A0A1B0GTH6 734 aa9.83□□□□□ -0.84
SPIDR-215ENST00000521798 J3QL48 77 aa9.83□□□□□ -0.84
SPIDR-215ENST00000521798 MARCH6O60337 910 aa9.83□□□□□ -0.84
SPIDR-215ENST00000521798 GARTP22102 1010 aa9.83□□□□□ -0.84
SPIDR-215ENST00000521798 FOXC1Q12948 553 aa9.83□□□□□ -0.84
SPIDR-215ENST00000521798 IDI1Q13907 227 aa9.83□□□□□ -0.84
SPIDR-215ENST00000521798 RASA3Q14644 834 aa9.83□□□□□ -0.84
SPIDR-215ENST00000521798 FBXL19Q6PCT2 694 aa9.83□□□□□ -0.84
SPIDR-215ENST00000521798 LRP10Q7Z4F1 713 aa9.83□□□□□ -0.84
SPIDR-215ENST00000521798 PHC3Q8NDX5 983 aa9.83□□□□□ -0.84
SPIDR-215ENST00000521798 HNRNPLLQ8WVV9 542 aaKnown RBP9.83□□□□□ -0.84
SPIDR-215ENST00000521798 DEPDC7Q96QD5 511 aa9.83□□□□□ -0.84
SPIDR-215ENST00000521798 PRKAG3Q9UGI9 489 aa9.83□□□□□ -0.84
SPIDR-215ENST00000521798 NOP58Q9Y2X3 529 aaKnown RBP9.83□□□□□ -0.84
SPIDR-215ENST00000521798 SETD5Q9C0A6 1442 aa9.82□□□□□ -0.84
SPIDR-215ENST00000521798 TMEM238LA0A1B0GVL6 79 aa9.82□□□□□ -0.84
SPIDR-215ENST00000521798 A0A1W2PNR3 127 aa9.82□□□□□ -0.84
SPIDR-215ENST00000521798 GREM1O60565 184 aa9.82□□□□□ -0.84
SPIDR-215ENST00000521798 MSX1P28360 303 aa9.82□□□□□ -0.84
SPIDR-215ENST00000521798 CTSOP43234 321 aaPredicted RBP9.82□□□□□ -0.84
SPIDR-215ENST00000521798 ZNF598Q86UK7 904 aaKnown RBP9.82□□□□□ -0.84
SPIDR-215ENST00000521798 THEMISQ8N1K5 641 aaPredicted RBP9.82□□□□□ -0.84
SPIDR-215ENST00000521798 PTPRTO14522 1441 aa9.82□□□□□ -0.84
SPIDR-215ENST00000521798 CYP2E1P05181 493 aaPredicted RBP9.81□□□□□ -0.84
SPIDR-215ENST00000521798 LIG3P49916 1009 aa9.81□□□□□ -0.84
SPIDR-215ENST00000521798 MAP3K11Q16584 847 aa9.81□□□□□ -0.84
SPIDR-215ENST00000521798 PLEKHG4Q58EX7 1191 aa9.81□□□□□ -0.84
SPIDR-215ENST00000521798 PCNX4Q63HM2 1172 aa9.81□□□□□ -0.84
SPIDR-215ENST00000521798 DTHD1Q6ZMT9 781 aa9.81□□□□□ -0.84
SPIDR-215ENST00000521798 SLC52A1Q9NWF4 448 aa9.81□□□□□ -0.84
SPIDR-215ENST00000521798 KANSL3Q9P2N6 904 aa9.81□□□□□ -0.84
SPIDR-215ENST00000521798 AKAP2Q9Y2D5 859 aa9.81□□□□□ -0.84
SPIDR-215ENST00000521798 UBR1Q8IWV7 1749 aa9.81□□□□□ -0.84
SPIDR-215ENST00000521798 PIK3C2BO00750 1634 aa9.81□□□□□ -0.84
SPIDR-215ENST00000521798 RAB3GAP2Q9H2M9 1393 aa9.8□□□□□ -0.84
SPIDR-215ENST00000521798 FBXO24O75426 580 aa9.8□□□□□ -0.84
SPIDR-215ENST00000521798 ANAPC15P60006 121 aa9.8□□□□□ -0.84
SPIDR-215ENST00000521798 FAM160A1Q05DH4 1040 aa9.8□□□□□ -0.84
SPIDR-215ENST00000521798 LINC00528Q8N1L1 170 aa9.8□□□□□ -0.84
SPIDR-215ENST00000521798 RNF217Q8TC41 542 aa9.8□□□□□ -0.84
SPIDR-215ENST00000521798 CPLX3Q8WVH0 158 aa9.8□□□□□ -0.84
SPIDR-215ENST00000521798 LIN7BQ9HAP6 207 aa9.8□□□□□ -0.84
SPIDR-215ENST00000521798 METTL14Q9HCE5 456 aaKnown RBP9.8□□□□□ -0.84
SPIDR-215ENST00000521798 BRD7Q9NPI1 651 aa9.8□□□□□ -0.84
SPIDR-215ENST00000521798 GJA3Q9Y6H8 435 aa9.8□□□□□ -0.84
SPIDR-215ENST00000521798 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.8□□□□□ -0.84
SPIDR-215ENST00000521798 NEURL4Q96JN8 1562 aa9.8□□□□□ -0.84
SPIDR-215ENST00000521798 ARHGAP23Q9P227 1491 aa9.79□□□□□ -0.84
SPIDR-215ENST00000521798 ADGRB3O60242 1522 aa9.79□□□□□ -0.84
SPIDR-215ENST00000521798 SLIT1O75093 1534 aa9.79□□□□□ -0.84
SPIDR-215ENST00000521798 TTC24A2A3L6 582 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms