RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 MDM2Q00987 491 aaPredicted RBP10.03□□□□□ -0.8
HMBOX1-208ENST00000521516 ANKRD23Q86SG2 305 aa10.03□□□□□ -0.8
HMBOX1-208ENST00000521516 ERO1BQ86YB8 467 aa10.03□□□□□ -0.8
HMBOX1-208ENST00000521516 PRMT6Q96LA8 375 aaPredicted RBP10.03□□□□□ -0.8
HMBOX1-208ENST00000521516 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.03□□□□□ -0.8
HMBOX1-208ENST00000521516 MUC6Q6W4X9 2439 aa10.02□□□□□ -0.8
HMBOX1-208ENST00000521516 IRF6O14896 467 aa10.02□□□□□ -0.81
HMBOX1-208ENST00000521516 FLT3LGP49771 235 aa10.02□□□□□ -0.81
HMBOX1-208ENST00000521516 ADAMTS19Q8TE59 1207 aa10.02□□□□□ -0.81
HMBOX1-208ENST00000521516 ATXN2LQ8WWM7 1075 aaKnown RBP10.02□□□□□ -0.81
HMBOX1-208ENST00000521516 VEZTQ9HBM0 779 aa10.02□□□□□ -0.81
HMBOX1-208ENST00000521516 SNCAIPQ9Y6H5 919 aa10.02□□□□□ -0.81
HMBOX1-208ENST00000521516 DDX60LQ5H9U9 1706 aaKnown RBP10.02□□□□□ -0.81
HMBOX1-208ENST00000521516 MGAMO43451 1857 aa10.02□□□□□ -0.81
HMBOX1-208ENST00000521516 AIMP1Q12904 312 aaKnown RBP10.02□□□□□ -0.81
HMBOX1-208ENST00000521516 PPIL2Q13356 520 aa10.02□□□□□ -0.81
HMBOX1-208ENST00000521516 PFASO15067 1338 aa10.01□□□□□ -0.81
HMBOX1-208ENST00000521516 TRIM28Q13263 835 aaKnown RBP10.01□□□□□ -0.81
HMBOX1-208ENST00000521516 CFAP100Q494V2 611 aa10.01□□□□□ -0.81
HMBOX1-208ENST00000521516 ALYREFQ86V81 257 aaKnown RBP10.01□□□□□ -0.81
HMBOX1-208ENST00000521516 TXNRD3Q86VQ6 643 aa10.01□□□□□ -0.81
HMBOX1-208ENST00000521516 CDAN1Q8IWY9 1227 aa10.01□□□□□ -0.81
HMBOX1-208ENST00000521516 CERS5Q8N5B7 392 aa10.01□□□□□ -0.81
HMBOX1-208ENST00000521516 PDHXO00330 501 aa10.01□□□□□ -0.81
HMBOX1-208ENST00000521516 GTF2IP78347 998 aa10.01□□□□□ -0.81
HMBOX1-208ENST00000521516 ASB2Q96Q27 587 aa10.01□□□□□ -0.81
HMBOX1-208ENST00000521516 UHRF1Q96T88 793 aaPredicted RBP10.01□□□□□ -0.81
HMBOX1-208ENST00000521516 OGDHLQ9ULD0 1010 aa10.01□□□□□ -0.81
HMBOX1-208ENST00000521516 COL6A1P12109 1028 aa10□□□□□ -0.81
HMBOX1-208ENST00000521516 EIF2S2P20042 333 aaKnown RBP10□□□□□ -0.81
HMBOX1-208ENST00000521516 SMAD3P84022 425 aaKnown RBP10□□□□□ -0.81
HMBOX1-208ENST00000521516 TNFAIP1Q13829 316 aa10□□□□□ -0.81
HMBOX1-208ENST00000521516 CCDC152Q4G0S7 254 aa10□□□□□ -0.81
HMBOX1-208ENST00000521516 ANKRD18AQ8IVF6 992 aa10□□□□□ -0.81
HMBOX1-208ENST00000521516 CCT4P50991 539 aaKnown RBP9.99□□□□□ -0.81
HMBOX1-208ENST00000521516 RTL5Q5HYW3 569 aaPredicted RBP9.99□□□□□ -0.81
HMBOX1-208ENST00000521516 PLBD2Q8NHP8 589 aa9.99□□□□□ -0.81
HMBOX1-208ENST00000521516 LRFN3Q9BTN0 628 aa9.99□□□□□ -0.81
HMBOX1-208ENST00000521516 MINPP1Q9UNW1 487 aa9.99□□□□□ -0.81
HMBOX1-208ENST00000521516 ATP5J2-PTCD1G3V325 749 aa9.99□□□□□ -0.81
HMBOX1-208ENST00000521516 HSP90B1P14625 803 aaKnown RBP9.99□□□□□ -0.81
HMBOX1-208ENST00000521516 MOGSQ13724 837 aa9.99□□□□□ -0.81
HMBOX1-208ENST00000521516 SPDYE2Q495Y8 402 aa9.99□□□□□ -0.81
HMBOX1-208ENST00000521516 ZBTB38Q8NAP3 1195 aaPredicted RBP9.98□□□□□ -0.81
HMBOX1-208ENST00000521516 P2RX7Q99572 595 aaKnown RBP9.98□□□□□ -0.81
HMBOX1-208ENST00000521516 FKBP1AP62942 108 aaKnown RBP9.98□□□□□ -0.81
HMBOX1-208ENST00000521516 PPATQ06203 517 aa9.98□□□□□ -0.81
HMBOX1-208ENST00000521516 PARK7Q99497 189 aaKnown RBP9.98□□□□□ -0.81
HMBOX1-208ENST00000521516 BSDC1Q9NW68 430 aaPredicted RBP9.98□□□□□ -0.81
HMBOX1-208ENST00000521516 KCNH4Q9UQ05 1017 aa9.98□□□□□ -0.81
HMBOX1-208ENST00000521516 LEMD3Q9Y2U8 911 aa9.98□□□□□ -0.81
HMBOX1-208ENST00000521516 ARAP2Q8WZ64 1704 aa9.97□□□□□ -0.81
HMBOX1-208ENST00000521516 PER1O15534 1290 aaPredicted RBP9.97□□□□□ -0.81
HMBOX1-208ENST00000521516 LRRC26Q2I0M4 334 aa9.97□□□□□ -0.81
HMBOX1-208ENST00000521516 LBHD1Q9BQE6 289 aaPredicted RBP9.97□□□□□ -0.81
HMBOX1-208ENST00000521516 ZNF70Q9UC06 446 aaPredicted RBP9.97□□□□□ -0.81
HMBOX1-208ENST00000521516 KLRK1P26718 216 aa9.97□□□□□ -0.81
HMBOX1-208ENST00000521516 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.97□□□□□ -0.81
HMBOX1-208ENST00000521516 THEGQ9P2T0 379 aa9.97□□□□□ -0.81
HMBOX1-208ENST00000521516 DNAH12Q6ZR08 3092 aa9.96□□□□□ -0.81
HMBOX1-208ENST00000521516 PDE8AO60658 829 aa9.96□□□□□ -0.82
HMBOX1-208ENST00000521516 MRPS5P82675 430 aaKnown RBP9.96□□□□□ -0.82
HMBOX1-208ENST00000521516 SHHQ15465 462 aa9.96□□□□□ -0.82
HMBOX1-208ENST00000521516 ZKSCAN4Q969J2 545 aaPredicted RBP9.96□□□□□ -0.82
HMBOX1-208ENST00000521516 TMEM39BQ9GZU3 492 aa9.96□□□□□ -0.82
HMBOX1-208ENST00000521516 CD209Q9NNX6 404 aa9.96□□□□□ -0.82
HMBOX1-208ENST00000521516 TNPO2O14787 897 aaKnown RBP9.95□□□□□ -0.82
HMBOX1-208ENST00000521516 HMGCRP04035 888 aa9.95□□□□□ -0.82
HMBOX1-208ENST00000521516 CC2D1BQ5T0F9 858 aaKnown RBP9.95□□□□□ -0.82
HMBOX1-208ENST00000521516 GPAT2Q6NUI2 795 aa9.95□□□□□ -0.82
HMBOX1-208ENST00000521516 CDC5LQ99459 802 aaKnown RBP9.95□□□□□ -0.82
HMBOX1-208ENST00000521516 HMX1Q9NP08 348 aaPredicted RBP9.95□□□□□ -0.82
HMBOX1-208ENST00000521516 U2AF1L5P0DN76 240 aaPredicted RBP9.95□□□□□ -0.82
HMBOX1-208ENST00000521516 CYP2C8P10632 490 aa9.95□□□□□ -0.82
HMBOX1-208ENST00000521516 U2AF1Q01081 240 aaKnown RBP eCLIP9.95□□□□□ -0.82
HMBOX1-208ENST00000521516 WRNIP1Q96S55 665 aa9.95□□□□□ -0.82
HMBOX1-208ENST00000521516 NUDCQ9Y266 331 aa9.95□□□□□ -0.82
HMBOX1-208ENST00000521516 F8W031 263 aaPredicted RBP9.94□□□□□ -0.82
HMBOX1-208ENST00000521516 EIF4G2P78344 907 aaKnown RBP eCLIP9.94□□□□□ -0.821e-6■■■□□ 15.8
HMBOX1-208ENST00000521516 GRIN2CQ14957 1233 aa9.94□□□□□ -0.82
HMBOX1-208ENST00000521516 C9orf50Q5SZB4 431 aa9.94□□□□□ -0.82
HMBOX1-208ENST00000521516 CCDC85AQ96PX6 553 aaPredicted RBP9.94□□□□□ -0.82
HMBOX1-208ENST00000521516 MRE11P49959 708 aa9.94□□□□□ -0.82
HMBOX1-208ENST00000521516 LTBP2Q14767 1821 aa9.94□□□□□ -0.82
HMBOX1-208ENST00000521516 DLG5Q8TDM6 1919 aa9.94□□□□□ -0.82
HMBOX1-208ENST00000521516 TSPYL4Q9UJ04 414 aa9.94□□□□□ -0.82
HMBOX1-208ENST00000521516 PCCAP05165 728 aaPredicted RBP9.93□□□□□ -0.82
HMBOX1-208ENST00000521516 TNNI2P48788 182 aa9.93□□□□□ -0.82
HMBOX1-208ENST00000521516 TMEM31Q5JXX7 168 aa9.93□□□□□ -0.82
HMBOX1-208ENST00000521516 AKNAD1Q5T1N1 836 aa9.93□□□□□ -0.82
HMBOX1-208ENST00000521516 TDRD3Q9H7E2 651 aaKnown RBP9.93□□□□□ -0.82
HMBOX1-208ENST00000521516 MAST2Q6P0Q8 1798 aa9.93□□□□□ -0.82
HMBOX1-208ENST00000521516 TCP10L2B9ZVM9 353 aa9.92□□□□□ -0.82
HMBOX1-208ENST00000521516 RBM5P52756 815 aaKnown RBP eCLIP9.92□□□□□ -0.82
HMBOX1-208ENST00000521516 TRIM32Q13049 653 aa9.92□□□□□ -0.82
HMBOX1-208ENST00000521516 MAP3K21Q5TCX8 1036 aa9.92□□□□□ -0.82
HMBOX1-208ENST00000521516 COA7Q96BR5 231 aa9.92□□□□□ -0.82
HMBOX1-208ENST00000521516 CFAP53Q96M91 514 aa9.92□□□□□ -0.82
HMBOX1-208ENST00000521516 EPHX3Q9H6B9 360 aa9.92□□□□□ -0.82
HMBOX1-208ENST00000521516 SERPINA10Q9UK55 444 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms