RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 PPP4R2Q9NY27 417 aa5.38□□□□□ -1.55
HMGN1P28-201ENST00000521340 CACNA2D2Q9NY47 1150 aa5.38□□□□□ -1.55
HMGN1P28-201ENST00000521340 NAGPAQ9UK23 515 aa5.38□□□□□ -1.55
HMGN1P28-201ENST00000521340 FAM221AA4D161 298 aa5.37□□□□□ -1.55
HMGN1P28-201ENST00000521340 PDE2AO00408 941 aaPredicted RBP5.37□□□□□ -1.55
HMGN1P28-201ENST00000521340 TM4SF5O14894 197 aa5.37□□□□□ -1.55
HMGN1P28-201ENST00000521340 SIN3BO75182 1162 aa5.37□□□□□ -1.55
HMGN1P28-201ENST00000521340 PF4P02776 101 aa5.37□□□□□ -1.55
HMGN1P28-201ENST00000521340 LIG3P49916 1009 aa5.37□□□□□ -1.55
HMGN1P28-201ENST00000521340 LMNB2Q03252 620 aa5.37□□□□□ -1.55
HMGN1P28-201ENST00000521340 SERINC3Q13530 473 aa5.37□□□□□ -1.55
HMGN1P28-201ENST00000521340 GNL2Q13823 731 aaKnown RBP5.37□□□□□ -1.55
HMGN1P28-201ENST00000521340 TPTE2Q6XPS3 522 aa5.37□□□□□ -1.55
HMGN1P28-201ENST00000521340 DTHD1Q6ZMT9 781 aa5.37□□□□□ -1.55
HMGN1P28-201ENST00000521340 STK35Q8TDR2 534 aa5.37□□□□□ -1.55
HMGN1P28-201ENST00000521340 ADAM19Q9H013 955 aa5.37□□□□□ -1.55
HMGN1P28-201ENST00000521340 GINM1Q9NU53 330 aa5.37□□□□□ -1.55
HMGN1P28-201ENST00000521340 SOX13Q9UN79 622 aa5.37□□□□□ -1.55
HMGN1P28-201ENST00000521340 AKAP2Q9Y2D5 859 aa5.37□□□□□ -1.55
HMGN1P28-201ENST00000521340 STARD13Q9Y3M8 1113 aa5.37□□□□□ -1.55
HMGN1P28-201ENST00000521340 ADARB2-AS1A8MUL3 147 aa5.36□□□□□ -1.55
HMGN1P28-201ENST00000521340 MINDY4BA8MYZ0 360 aa5.36□□□□□ -1.55
HMGN1P28-201ENST00000521340 KLF4O43474 513 aa5.36□□□□□ -1.55
HMGN1P28-201ENST00000521340 SELPP16109 830 aa5.36□□□□□ -1.55
HMGN1P28-201ENST00000521340 GBP2P32456 591 aaPredicted RBP5.36□□□□□ -1.55
HMGN1P28-201ENST00000521340 GTF2F1P35269 517 aaKnown RBP eCLIP5.36□□□□□ -1.55
HMGN1P28-201ENST00000521340 RPS26P62854 115 aaKnown RBP5.36□□□□□ -1.55
HMGN1P28-201ENST00000521340 MLLT1Q03111 559 aaPredicted RBP5.36□□□□□ -1.55
HMGN1P28-201ENST00000521340 CAMK2GQ13555 558 aaPredicted RBP5.36□□□□□ -1.55
HMGN1P28-201ENST00000521340 PWP1Q13610 501 aa5.36□□□□□ -1.55
HMGN1P28-201ENST00000521340 DOC2BQ14184 412 aa5.36□□□□□ -1.55
HMGN1P28-201ENST00000521340 GRIK5Q16478 980 aa5.36□□□□□ -1.55
HMGN1P28-201ENST00000521340 CCDC144BQ3MJ40 725 aa5.36□□□□□ -1.55
HMGN1P28-201ENST00000521340 HFE2Q6ZVN8 426 aa5.36□□□□□ -1.55
HMGN1P28-201ENST00000521340 RELL1Q8IUW5 271 aa5.36□□□□□ -1.55
HMGN1P28-201ENST00000521340 KIAA0825Q8IV33 1275 aa5.36□□□□□ -1.55
HMGN1P28-201ENST00000521340 SLITRK4Q8IW52 837 aa5.36□□□□□ -1.55
HMGN1P28-201ENST00000521340 ZFYVE1Q9HBF4 777 aa5.36□□□□□ -1.55
HMGN1P28-201ENST00000521340 SMARCA5O60264 1052 aaPredicted RBP5.35□□□□□ -1.55
HMGN1P28-201ENST00000521340 B3GALT4O96024 378 aa5.35□□□□□ -1.55
HMGN1P28-201ENST00000521340 ZNF252P-AS1Q0IIN9 211 aa5.35□□□□□ -1.55
HMGN1P28-201ENST00000521340 PERM1Q5SV97 790 aa5.35□□□□□ -1.55
HMGN1P28-201ENST00000521340 FAM196AQ6ZSG2 479 aa5.35□□□□□ -1.55
HMGN1P28-201ENST00000521340 Q8N3U1 123 aa5.35□□□□□ -1.55
HMGN1P28-201ENST00000521340 TTC9Q92623 222 aa5.35□□□□□ -1.55
HMGN1P28-201ENST00000521340 PNMA5Q96PV4 448 aa5.35□□□□□ -1.55
HMGN1P28-201ENST00000521340 LPIN3Q9BQK8 851 aa5.35□□□□□ -1.55
HMGN1P28-201ENST00000521340 LRRC3Q9BY71 257 aa5.35□□□□□ -1.55
HMGN1P28-201ENST00000521340 CEP44Q9C0F1 390 aa5.35□□□□□ -1.55
HMGN1P28-201ENST00000521340 UBP1Q9NZI7 540 aa5.35□□□□□ -1.55
HMGN1P28-201ENST00000521340 PCDHB5Q9Y5E4 795 aa5.35□□□□□ -1.55
HMGN1P28-201ENST00000521340 RLBP1P12271 317 aa5.34□□□□□ -1.55
HMGN1P28-201ENST00000521340 ALAS2P22557 587 aa5.34□□□□□ -1.55
HMGN1P28-201ENST00000521340 ETFBP38117 255 aa5.34□□□□□ -1.55
HMGN1P28-201ENST00000521340 MAP3K11Q16584 847 aa5.34□□□□□ -1.55
HMGN1P28-201ENST00000521340 C8orf86Q6ZUL3 223 aa5.34□□□□□ -1.55
HMGN1P28-201ENST00000521340 NOP9Q86U38 636 aaKnown RBP5.34□□□□□ -1.55
HMGN1P28-201ENST00000521340 PDZD3Q86UT5 571 aa5.34□□□□□ -1.55
HMGN1P28-201ENST00000521340 CCDC84Q86UT8 332 aaPredicted RBP5.34□□□□□ -1.55
HMGN1P28-201ENST00000521340 TRIM42Q8IWZ5 723 aa5.34□□□□□ -1.55
HMGN1P28-201ENST00000521340 FBXO27Q8NI29 283 aa5.34□□□□□ -1.55
HMGN1P28-201ENST00000521340 PLD4Q96BZ4 506 aa5.34□□□□□ -1.55
HMGN1P28-201ENST00000521340 NRSN2Q9GZP1 204 aa5.34□□□□□ -1.55
HMGN1P28-201ENST00000521340 ZNF408Q9H9D4 720 aa5.34□□□□□ -1.55
HMGN1P28-201ENST00000521340 SLC6A14Q9UN76 642 aa5.34□□□□□ -1.55
HMGN1P28-201ENST00000521340 EFR3BQ9Y2G0 817 aa5.34□□□□□ -1.55
HMGN1P28-201ENST00000521340 TBX22Q9Y458 520 aa5.34□□□□□ -1.55
HMGN1P28-201ENST00000521340 M0R082 166 aa5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 F13A1P00488 732 aa5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 ALBP02768 609 aa5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 SPATA31C1P0DKV0 1188 aa5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 GATA4P43694 442 aa5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 NASPP49321 788 aaPredicted RBP5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 FAM160A1Q05DH4 1040 aa5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 PTPN11Q06124 597 aaPredicted RBP5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 PCNX4Q63HM2 1172 aa5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 TTBK2Q6IQ55 1244 aa5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 BNC2Q6ZN30 1099 aaPredicted RBP5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 C20orf204Q6ZNR8 217 aa5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 VPS37DQ86XT2 251 aa5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 NLGN1Q8N2Q7 840 aa5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 MICALL1Q8N3F8 863 aa5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 ZNF417Q8TAU3 575 aa5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 BSNDQ8WZ55 320 aa5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 GAL3ST3Q96A11 431 aa5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 SHDQ96IW2 340 aa5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 ZNF587Q96SQ5 575 aaPredicted RBP5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 CLEC4MQ9H2X3 399 aaPredicted RBP5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 SEMA6BQ9H3T3 888 aa5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 TMEM39AQ9NV64 488 aa5.33□□□□□ -1.56
HMGN1P28-201ENST00000521340 ROBO2Q9HCK4 1378 aa5.32□□□□□ -1.56
HMGN1P28-201ENST00000521340 FAM229AH3BQW9 127 aa5.32□□□□□ -1.56
HMGN1P28-201ENST00000521340 CILPO75339 1184 aa5.32□□□□□ -1.56
HMGN1P28-201ENST00000521340 ESRRAP11474 423 aaPredicted RBP5.32□□□□□ -1.56
HMGN1P28-201ENST00000521340 COL9A2Q14055 689 aaPredicted RBP5.32□□□□□ -1.56
HMGN1P28-201ENST00000521340 HGSNATQ68CP4 663 aa5.32□□□□□ -1.56
HMGN1P28-201ENST00000521340 ZNF746Q6NUN9 644 aaPredicted RBP5.32□□□□□ -1.56
HMGN1P28-201ENST00000521340 MPRIPQ6WCQ1 1025 aa5.32□□□□□ -1.56
HMGN1P28-201ENST00000521340 FAM169BQ8N8A8 192 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms