RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 ZBED3Q96IU2 234 aaPredicted RBP15.13■□□□□ 0.01
CLK4-208ENST00000520957 HDAC9Q9UKV0 1011 aa15.13■□□□□ 0.01
CLK4-208ENST00000520957 PDS5AQ29RF7 1337 aaKnown RBP15.13■□□□□ 0.01
CLK4-208ENST00000520957 NEFLP07196 543 aa15.12■□□□□ 0.01
CLK4-208ENST00000520957 CRKP46108 304 aa15.12■□□□□ 0.01
CLK4-208ENST00000520957 DLGAP5Q15398 846 aa15.12■□□□□ 0.01
CLK4-208ENST00000520957 ZNF646O15015 1829 aaPredicted RBP15.12■□□□□ 0.01
CLK4-208ENST00000520957 ATP5JP18859 108 aa15.12■□□□□ 0.01
CLK4-208ENST00000520957 MECOMQ03112 1051 aa15.12■□□□□ 0.01
CLK4-208ENST00000520957 ANGEL2Q5VTE6 544 aaKnown RBP15.12■□□□□ 0.01
CLK4-208ENST00000520957 CHADLQ6NUI6 762 aa15.12■□□□□ 0.01
CLK4-208ENST00000520957 CHD1LQ86WJ1 897 aa15.12■□□□□ 0.01
CLK4-208ENST00000520957 CNTROBQ8N137 903 aa15.12■□□□□ 0.01
CLK4-208ENST00000520957 RBM46Q8TBY0 533 aaKnown RBP15.12■□□□□ 0.01
CLK4-208ENST00000520957 DNAJC2Q99543 621 aaKnown RBP15.12■□□□□ 0.01
CLK4-208ENST00000520957 ECHDC1Q9NTX5 307 aa15.12■□□□□ 0.01
CLK4-208ENST00000520957 PGAP2Q9UHJ9 254 aa15.12■□□□□ 0.01
CLK4-208ENST00000520957 SERPINA10Q9UK55 444 aa15.12■□□□□ 0.01
CLK4-208ENST00000520957 SPDYE2BA6NHP3 402 aa15.11■□□□□ 0.01
CLK4-208ENST00000520957 GOLIM4O00461 696 aa15.11■□□□□ 0.01
CLK4-208ENST00000520957 TRAF5O00463 557 aa15.11■□□□□ 0.01
CLK4-208ENST00000520957 ITGBL1O95965 494 aaPredicted RBP15.11■□□□□ 0.01
CLK4-208ENST00000520957 SPDYE6P0CI01 402 aa15.11■□□□□ 0.01
CLK4-208ENST00000520957 APOBEC3HQ6NTF7 200 aaKnown RBP15.11■□□□□ 0.01
CLK4-208ENST00000520957 GLIS2Q9BZE0 524 aaPredicted RBP15.11■□□□□ 0.01
CLK4-208ENST00000520957 GGA3Q9NZ52 723 aa15.11■□□□□ 0.01
CLK4-208ENST00000520957 RAI14Q9P0K7 980 aa15.11■□□□□ 0.01
CLK4-208ENST00000520957 LRP2BPQ9P2M1 347 aa15.11■□□□□ 0.01
CLK4-208ENST00000520957 SUGT1Q9Y2Z0 365 aa15.11■□□□□ 0.01
CLK4-208ENST00000520957 ARAP2Q8WZ64 1704 aa15.11■□□□□ 0.01
CLK4-208ENST00000520957 SALL3Q9BXA9 1300 aa15.1■□□□□ 0.01
CLK4-208ENST00000520957 CLRN2A0PK11 232 aa15.1■□□□□ 0.01
CLK4-208ENST00000520957 CHGBP05060 677 aa15.1■□□□□ 0.01
CLK4-208ENST00000520957 ERICH6Q7L0X2 663 aa15.1■□□□□ 0.01
CLK4-208ENST00000520957 NSUN4Q96CB9 384 aaKnown RBP15.1■□□□□ 0.01
CLK4-208ENST00000520957 TDRD3Q9H7E2 651 aaKnown RBP15.1■□□□□ 0.01
CLK4-208ENST00000520957 MAP4K4O95819 1239 aaPredicted RBP15.09■□□□□ 0.01
CLK4-208ENST00000520957 SLFNL1Q499Z3 407 aa15.09■□□□□ 0.01
CLK4-208ENST00000520957 PRAMEF18Q5VWM3 479 aa15.09■□□□□ 0.01
CLK4-208ENST00000520957 USP48Q86UV5 1035 aa15.09■□□□□ 0.01
CLK4-208ENST00000520957 SKAP1Q86WV1 359 aa15.09■□□□□ 0.01
CLK4-208ENST00000520957 MTMR14Q8NCE2 650 aa15.09■□□□□ 0.01
CLK4-208ENST00000520957 SMC1BQ8NDV3 1235 aa15.09■□□□□ 0.01
CLK4-208ENST00000520957 ZC3H15Q8WU90 426 aaKnown RBP15.09■□□□□ 0.01
CLK4-208ENST00000520957 TEKT1Q969V4 418 aa15.09■□□□□ 0.01
CLK4-208ENST00000520957 HAUS7Q99871 368 aa15.09■□□□□ 0.01
CLK4-208ENST00000520957 MRIQ9BWK5 157 aa15.09■□□□□ 0.01
CLK4-208ENST00000520957 ZBTB47Q9UFB7 747 aaPredicted RBP15.09■□□□□ 0.01
CLK4-208ENST00000520957 DAGLAQ9Y4D2 1042 aa15.09■□□□□ 0.01
CLK4-208ENST00000520957 SCN4AP35499 1836 aa15.09■□□□□ 0.01
CLK4-208ENST00000520957 PSME4Q14997 1843 aa15.09■□□□□ 0.01
CLK4-208ENST00000520957 ADM5C9JUS6 153 aa15.09■□□□□ 0.01
CLK4-208ENST00000520957 IDH1O75874 414 aaKnown RBP15.09■□□□□ 0.01
CLK4-208ENST00000520957 MX1P20591 662 aa15.09■□□□□ 0.01
CLK4-208ENST00000520957 PDE4AP27815 886 aa15.09■□□□□ 0.01
CLK4-208ENST00000520957 CACNB3P54284 484 aa15.09■□□□□ 0.01
CLK4-208ENST00000520957 HDLBPQ00341 1268 aaKnown RBP15.09■□□□□ 0.01
CLK4-208ENST00000520957 SPTY2D1Q68D10 685 aaPredicted RBP15.09■□□□□ 0.01
CLK4-208ENST00000520957 ADGRA1Q86SQ6 560 aa15.09■□□□□ 0.01
CLK4-208ENST00000520957 DZIP1Q86YF9 867 aaKnown RBP15.09■□□□□ 0.01
CLK4-208ENST00000520957 ZGPATQ8N5A5 531 aaKnown RBP15.09■□□□□ 0.01
CLK4-208ENST00000520957 PI4K2BQ8TCG2 481 aa15.09■□□□□ 0.01
CLK4-208ENST00000520957 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.09■□□□□ 0.01
CLK4-208ENST00000520957 ZDHHC15Q96MV8 337 aa15.09■□□□□ 0.01
CLK4-208ENST00000520957 MMP14P50281 582 aa15.08■□□□□ 0
CLK4-208ENST00000520957 PDE1AP54750 535 aa15.08■□□□□ 0
CLK4-208ENST00000520957 C1QTNF8P60827 252 aa15.08■□□□□ 0
CLK4-208ENST00000520957 HHIPL2Q6UWX4 724 aa15.08■□□□□ 0
CLK4-208ENST00000520957 KRT26Q7Z3Y9 468 aa15.08■□□□□ 0
CLK4-208ENST00000520957 PAG1Q9NWQ8 432 aa15.08■□□□□ 0
CLK4-208ENST00000520957 PLEKHM2Q8IWE5 1019 aa15.07■□□□□ 0
CLK4-208ENST00000520957 DCPSQ96C86 337 aaKnown RBP15.07■□□□□ 0
CLK4-208ENST00000520957 ZNF70Q9UC06 446 aaPredicted RBP15.07■□□□□ 0
CLK4-208ENST00000520957 STAP2Q9UGK3 403 aa15.07■□□□□ 0
CLK4-208ENST00000520957 CEP350Q5VT06 3117 aa15.07■□□□□ 0
CLK4-208ENST00000520957 CCDC136Q96JN2 1154 aa15.06■□□□□ 0
CLK4-208ENST00000520957 VEZTQ9HBM0 779 aa15.06■□□□□ 0
CLK4-208ENST00000520957 FSTL1Q12841 308 aa15.06■□□□□ 0
CLK4-208ENST00000520957 CDC42EP5Q6NZY7 148 aa15.06■□□□□ 0
CLK4-208ENST00000520957 CDC37L1Q7L3B6 337 aa15.06■□□□□ 0
CLK4-208ENST00000520957 MAGEB6Q8N7X4 407 aa15.06■□□□□ 0
CLK4-208ENST00000520957 FAM163AQ96GL9 167 aaPredicted RBP15.06■□□□□ 0
CLK4-208ENST00000520957 GPATCH3Q96I76 525 aa15.06■□□□□ 0
CLK4-208ENST00000520957 GAKO14976 1311 aa15.05■□□□□ 0
CLK4-208ENST00000520957 MAST3O60307 1309 aa15.05■□□□□ 0
CLK4-208ENST00000520957 TTC41PQ6P2S7 1318 aa15.05■□□□□ 0
CLK4-208ENST00000520957 AKAP11Q9UKA4 1901 aa15.05■□□□□ -0
CLK4-208ENST00000520957 TCP10L2B9ZVM9 353 aa15.05■□□□□ -0
CLK4-208ENST00000520957 HTRA3P83110 453 aa15.05■□□□□ -0
CLK4-208ENST00000520957 SPDYE2Q495Y8 402 aa15.05■□□□□ -0
CLK4-208ENST00000520957 NAA16Q6N069 864 aaPredicted RBP15.05■□□□□ -0
CLK4-208ENST00000520957 SULF1Q8IWU6 871 aa15.05■□□□□ -0
CLK4-208ENST00000520957 USP40Q9NVE5 1235 aa15.05■□□□□ -0
CLK4-208ENST00000520957 ADAMTSL1Q8N6G6 1762 aa15.05■□□□□ -0
CLK4-208ENST00000520957 CYP7A1P22680 504 aa15.04■□□□□ -0
CLK4-208ENST00000520957 BTDP43251 543 aa15.04■□□□□ -0
CLK4-208ENST00000520957 NFIAQ12857 509 aa15.04■□□□□ -0
CLK4-208ENST00000520957 SLC9C2Q5TAH2 1124 aa15.04■□□□□ -0
CLK4-208ENST00000520957 CDAN1Q8IWY9 1227 aa15.04■□□□□ -0
CLK4-208ENST00000520957 DEFB129Q9H1M3 183 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms