RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 FKBP4Q02790 459 aaKnown RBP eCLIP8.6□□□□□ -1.03
CLK4-207ENST00000520909 ZAR1Q86SH2 424 aa8.6□□□□□ -1.03
CLK4-207ENST00000520909 TP53INP2Q8IXH6 220 aa8.6□□□□□ -1.03
CLK4-207ENST00000520909 SHISA5Q8N114 240 aa8.6□□□□□ -1.03
CLK4-207ENST00000520909 EZH1Q92800 747 aaPredicted RBP8.6□□□□□ -1.03
CLK4-207ENST00000520909 SF3B2Q13435 895 aaKnown RBP8.59□□□□□ -1.03
CLK4-207ENST00000520909 VSIG10LQ86VR7 867 aa8.59□□□□□ -1.03
CLK4-207ENST00000520909 ZFYVE1Q9HBF4 777 aa8.59□□□□□ -1.03
CLK4-207ENST00000520909 BSDC1Q9NW68 430 aaPredicted RBP8.59□□□□□ -1.03
CLK4-207ENST00000520909 PRKAG2Q9UGJ0 569 aa8.59□□□□□ -1.03
CLK4-207ENST00000520909 A0A096LPE4 126 aa8.58□□□□□ -1.04
CLK4-207ENST00000520909 A0A1W2PPZ6 126 aa8.58□□□□□ -1.04
CLK4-207ENST00000520909 TMEM88BA6NKF7 163 aa8.58□□□□□ -1.04
CLK4-207ENST00000520909 METTL12A8MUP2 240 aa8.58□□□□□ -1.04
CLK4-207ENST00000520909 FZD6O60353 706 aa8.58□□□□□ -1.04
CLK4-207ENST00000520909 CYP11A1P05108 521 aa8.58□□□□□ -1.04
CLK4-207ENST00000520909 ADMP35318 185 aa8.58□□□□□ -1.04
CLK4-207ENST00000520909 HP1BP3Q5SSJ5 553 aaPredicted RBP8.58□□□□□ -1.04
CLK4-207ENST00000520909 DUSP27Q5VZP5 1158 aa8.58□□□□□ -1.04
CLK4-207ENST00000520909 CLEC4MQ9H2X3 399 aaPredicted RBP8.58□□□□□ -1.04
CLK4-207ENST00000520909 MAOBP27338 520 aa8.57□□□□□ -1.04
CLK4-207ENST00000520909 PCDH1Q08174 1060 aa8.57□□□□□ -1.04
CLK4-207ENST00000520909 MAP7Q14244 749 aa8.57□□□□□ -1.04
CLK4-207ENST00000520909 GJD3Q8N144 294 aa8.57□□□□□ -1.04
CLK4-207ENST00000520909 CCDC87Q9NVE4 849 aa8.57□□□□□ -1.04
CLK4-207ENST00000520909 ARID3CA6NKF2 412 aa8.56□□□□□ -1.04
CLK4-207ENST00000520909 PPP1R15AO75807 674 aaPredicted RBP8.56□□□□□ -1.04
CLK4-207ENST00000520909 POLR3DP05423 398 aaPredicted RBP8.56□□□□□ -1.04
CLK4-207ENST00000520909 ADH5P11766 374 aa8.56□□□□□ -1.04
CLK4-207ENST00000520909 CYP27A1Q02318 531 aa8.56□□□□□ -1.04
CLK4-207ENST00000520909 POU4F3Q15319 338 aa8.56□□□□□ -1.04
CLK4-207ENST00000520909 ZNF423Q2M1K9 1284 aa8.56□□□□□ -1.04
CLK4-207ENST00000520909 NRSN2Q9GZP1 204 aa8.56□□□□□ -1.04
CLK4-207ENST00000520909 RAD18Q9NS91 495 aa8.56□□□□□ -1.04
CLK4-207ENST00000520909 FAM170BA6NMN3 283 aa8.55□□□□□ -1.04
CLK4-207ENST00000520909 NFICP08651 508 aa8.55□□□□□ -1.04
CLK4-207ENST00000520909 DYMQ7RTS9 669 aa8.55□□□□□ -1.04
CLK4-207ENST00000520909 CCNJLQ8IV13 435 aa8.55□□□□□ -1.04
CLK4-207ENST00000520909 DDX54Q8TDD1 881 aaKnown RBP8.55□□□□□ -1.04
CLK4-207ENST00000520909 ASIC4Q96FT7 647 aa8.55□□□□□ -1.04
CLK4-207ENST00000520909 ACTL7BQ9Y614 415 aa8.55□□□□□ -1.04
CLK4-207ENST00000520909 A0A1W2PP55 124 aa8.54□□□□□ -1.04
CLK4-207ENST00000520909 ABL1P00519 1130 aa8.54□□□□□ -1.04
CLK4-207ENST00000520909 AKAP4Q5JQC9 854 aa8.54□□□□□ -1.04
CLK4-207ENST00000520909 KRTAP4-2Q9BYR5 136 aa8.54□□□□□ -1.04
CLK4-207ENST00000520909 LIN7BQ9HAP6 207 aa8.54□□□□□ -1.04
CLK4-207ENST00000520909 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.54□□□□□ -1.04
CLK4-207ENST00000520909 RAB6AP20340 208 aa8.54□□□□□ -1.04
CLK4-207ENST00000520909 GRIA4P48058 902 aa8.54□□□□□ -1.04
CLK4-207ENST00000520909 JAG1P78504 1218 aa8.54□□□□□ -1.04
CLK4-207ENST00000520909 SPRED3Q2MJR0 410 aa8.54□□□□□ -1.04
CLK4-207ENST00000520909 CBLL1Q75N03 491 aa8.54□□□□□ -1.04
CLK4-207ENST00000520909 GALNT12Q8IXK2 581 aa8.54□□□□□ -1.04
CLK4-207ENST00000520909 AGBL5Q8NDL9 886 aa8.54□□□□□ -1.04
CLK4-207ENST00000520909 GATA6Q92908 595 aa8.54□□□□□ -1.04
CLK4-207ENST00000520909 NFXL1Q6ZNB6 911 aa8.53□□□□□ -1.04
CLK4-207ENST00000520909 FLCNQ8NFG4 579 aa8.53□□□□□ -1.04
CLK4-207ENST00000520909 TCF12Q99081 682 aa8.53□□□□□ -1.04
CLK4-207ENST00000520909 CORO1BQ9BR76 489 aa8.53□□□□□ -1.04
CLK4-207ENST00000520909 SEMA6CQ9H3T2 930 aa8.53□□□□□ -1.04
CLK4-207ENST00000520909 LRRC4CQ9HCJ2 640 aa8.53□□□□□ -1.04
CLK4-207ENST00000520909 ANO2Q9NQ90 1003 aa8.53□□□□□ -1.04
CLK4-207ENST00000520909 NEFLP07196 543 aa8.52□□□□□ -1.05
CLK4-207ENST00000520909 ASPAP45381 313 aa8.52□□□□□ -1.05
CLK4-207ENST00000520909 PHLDB3Q6NSJ2 640 aa8.52□□□□□ -1.05
CLK4-207ENST00000520909 ACSS3Q9H6R3 686 aa8.52□□□□□ -1.05
CLK4-207ENST00000520909 CTSBP07858 339 aa8.51□□□□□ -1.05
CLK4-207ENST00000520909 JUNBP17275 347 aaPredicted RBP8.51□□□□□ -1.05
CLK4-207ENST00000520909 ZNF765Q7L2R6 523 aa8.51□□□□□ -1.05
CLK4-207ENST00000520909 ZC3H7BQ9UGR2 993 aaKnown RBP8.51□□□□□ -1.05
CLK4-207ENST00000520909 ZNF211Q13398 564 aaPredicted RBP8.5□□□□□ -1.05
CLK4-207ENST00000520909 OGFOD2Q6N063 350 aa8.5□□□□□ -1.05
CLK4-207ENST00000520909 FAM105AQ9NUU6 356 aa8.5□□□□□ -1.05
CLK4-207ENST00000520909 AP4E1Q9UPM8 1137 aa8.5□□□□□ -1.05
CLK4-207ENST00000520909 B3GALT4O96024 378 aa8.49□□□□□ -1.05
CLK4-207ENST00000520909 PAK6Q9NQU5 681 aaPredicted RBP8.49□□□□□ -1.05
CLK4-207ENST00000520909 BRPF3Q9ULD4 1205 aa8.49□□□□□ -1.05
CLK4-207ENST00000520909 ITGB5P18084 799 aa8.48□□□□□ -1.05
CLK4-207ENST00000520909 COL19A1Q14993 1142 aa8.48□□□□□ -1.05
CLK4-207ENST00000520909 KIAA0319Q5VV43 1072 aa8.48□□□□□ -1.05
CLK4-207ENST00000520909 OGFOD3Q6PK18 319 aa8.48□□□□□ -1.05
CLK4-207ENST00000520909 CCDC82Q8N4S0 544 aa8.48□□□□□ -1.05
CLK4-207ENST00000520909 TRIM56Q9BRZ2 755 aaKnown RBP8.48□□□□□ -1.05
CLK4-207ENST00000520909 GSX1Q9H4S2 264 aaPredicted RBP8.48□□□□□ -1.05
CLK4-207ENST00000520909 DAGLAQ9Y4D2 1042 aa8.48□□□□□ -1.05
CLK4-207ENST00000520909 AOC2O75106 756 aa8.47□□□□□ -1.05
CLK4-207ENST00000520909 SEZ6L2Q6UXD5 910 aa8.47□□□□□ -1.05
CLK4-207ENST00000520909 EHD4Q9H223 541 aa8.47□□□□□ -1.05
CLK4-207ENST00000520909 C1GALT1Q9NS00 363 aa8.47□□□□□ -1.05
CLK4-207ENST00000520909 SLC5A6Q9Y289 635 aa8.47□□□□□ -1.05
CLK4-207ENST00000520909 ECEL1O95672 775 aa8.46□□□□□ -1.06
CLK4-207ENST00000520909 PDE3AQ14432 1141 aa8.46□□□□□ -1.06
CLK4-207ENST00000520909 CYP27C1Q4G0S4 372 aa8.46□□□□□ -1.06
CLK4-207ENST00000520909 POU5F2Q8N7G0 328 aa8.46□□□□□ -1.06
CLK4-207ENST00000520909 ZNF576Q9H609 170 aa8.46□□□□□ -1.06
CLK4-207ENST00000520909 CARNS1A5YM72 827 aa8.45□□□□□ -1.06
CLK4-207ENST00000520909 ICMTO60725 284 aa8.45□□□□□ -1.06
CLK4-207ENST00000520909 ITPKAP23677 461 aa8.45□□□□□ -1.06
CLK4-207ENST00000520909 AP3B2Q13367 1082 aa8.45□□□□□ -1.06
CLK4-207ENST00000520909 USPL1Q5W0Q7 1092 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms