RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 LRRC69Q6ZNQ3 347 aa10.2□□□□□ -0.78
SHPRH-208ENST00000520752 SRLQ86TD4 932 aa10.2□□□□□ -0.78
SHPRH-208ENST00000520752 ABTB2Q8N961 1025 aa10.2□□□□□ -0.78
SHPRH-208ENST00000520752 ZNF280CQ8ND82 737 aa10.2□□□□□ -0.78
SHPRH-208ENST00000520752 ZBTB9Q96C00 473 aa10.2□□□□□ -0.78
SHPRH-208ENST00000520752 ERO1AQ96HE7 468 aa10.2□□□□□ -0.78
SHPRH-208ENST00000520752 MPHOSPH9Q99550 1183 aa10.2□□□□□ -0.78
SHPRH-208ENST00000520752 PLEKHG2Q9H7P9 1386 aa10.2□□□□□ -0.78
SHPRH-208ENST00000520752 DMGDHQ9UI17 866 aaKnown RBP10.2□□□□□ -0.78
SHPRH-208ENST00000520752 ZNF608Q9ULD9 1512 aaPredicted RBP10.2□□□□□ -0.78
SHPRH-208ENST00000520752 EFCAB5A4FU69 1503 aa10.19□□□□□ -0.78
SHPRH-208ENST00000520752 TCOF1Q13428 1488 aaKnown RBP10.19□□□□□ -0.78
SHPRH-208ENST00000520752 H3BRB1 525 aa10.19□□□□□ -0.78
SHPRH-208ENST00000520752 KIF2AO00139 706 aaPredicted RBP10.19□□□□□ -0.78
SHPRH-208ENST00000520752 MAFGO15525 162 aa10.19□□□□□ -0.78
SHPRH-208ENST00000520752 THBS1P07996 1170 aa10.19□□□□□ -0.78
SHPRH-208ENST00000520752 MAP2K2P36507 400 aa10.19□□□□□ -0.78
SHPRH-208ENST00000520752 ZNF787Q6DD87 383 aa10.19□□□□□ -0.78
SHPRH-208ENST00000520752 MCTP1Q6DN14 999 aa10.19□□□□□ -0.78
SHPRH-208ENST00000520752 SND1Q7KZF4 910 aaKnown RBP eCLIP10.19□□□□□ -0.78
SHPRH-208ENST00000520752 GLYCTKQ8IVS8 523 aa10.19□□□□□ -0.78
SHPRH-208ENST00000520752 ETFBKMTQ8IXQ9 262 aa10.19□□□□□ -0.78
SHPRH-208ENST00000520752 GPATCH11Q8N954 259 aa10.19□□□□□ -0.78
SHPRH-208ENST00000520752 ANKRD20A12PQ8NF67 263 aa10.19□□□□□ -0.78
SHPRH-208ENST00000520752 FAM107BQ9H098 131 aa10.19□□□□□ -0.78
SHPRH-208ENST00000520752 NUCKS1Q9H1E3 243 aaKnown RBP10.19□□□□□ -0.78
SHPRH-208ENST00000520752 TUT1Q9H6E5 874 aaKnown RBP10.19□□□□□ -0.78
SHPRH-208ENST00000520752 CUEDC1Q9NWM3 386 aaPredicted RBP10.19□□□□□ -0.78
SHPRH-208ENST00000520752 PCF11O94913 1555 aaKnown RBP10.18□□□□□ -0.78
SHPRH-208ENST00000520752 TUBB4AP04350 444 aa10.18□□□□□ -0.78
SHPRH-208ENST00000520752 IRX1P78414 480 aaPredicted RBP10.18□□□□□ -0.78
SHPRH-208ENST00000520752 UBAP2LQ14157 1087 aaKnown RBP10.18□□□□□ -0.78
SHPRH-208ENST00000520752 FAM26DQ5JW98 314 aa10.18□□□□□ -0.78
SHPRH-208ENST00000520752 FIGNL1Q6PIW4 674 aa10.18□□□□□ -0.78
SHPRH-208ENST00000520752 SYT10Q6XYQ8 523 aa10.18□□□□□ -0.78
SHPRH-208ENST00000520752 MMS22LQ6ZRQ5 1243 aa10.18□□□□□ -0.78
SHPRH-208ENST00000520752 NPAS3Q8IXF0 933 aa10.18□□□□□ -0.78
SHPRH-208ENST00000520752 STAG1Q8WVM7 1258 aa10.18□□□□□ -0.78
SHPRH-208ENST00000520752 JARID2Q92833 1246 aaPredicted RBP10.18□□□□□ -0.78
SHPRH-208ENST00000520752 SGSM3Q96HU1 749 aa10.18□□□□□ -0.78
SHPRH-208ENST00000520752 HSH2DQ96JZ2 352 aa10.18□□□□□ -0.78
SHPRH-208ENST00000520752 PAIP2Q9BPZ3 127 aaKnown RBP10.18□□□□□ -0.78
SHPRH-208ENST00000520752 GJA3Q9Y6H8 435 aa10.18□□□□□ -0.78
SHPRH-208ENST00000520752 ZBTB39O15060 712 aa10.17□□□□□ -0.78
SHPRH-208ENST00000520752 MICAL2O94851 1124 aa10.17□□□□□ -0.78
SHPRH-208ENST00000520752 MPSTP25325 297 aa10.17□□□□□ -0.78
SHPRH-208ENST00000520752 OS9Q13438 667 aaPredicted RBP10.17□□□□□ -0.78
SHPRH-208ENST00000520752 ZSCAN26Q16670 478 aa10.17□□□□□ -0.78
SHPRH-208ENST00000520752 ALKBH2Q6NS38 261 aa10.17□□□□□ -0.78
SHPRH-208ENST00000520752 NANOS1Q8WY41 292 aaKnown RBP10.17□□□□□ -0.78
SHPRH-208ENST00000520752 ZCCHC2Q9C0B9 1178 aaKnown RBP10.17□□□□□ -0.78
SHPRH-208ENST00000520752 ZNF446Q9NWS9 450 aa10.17□□□□□ -0.78
SHPRH-208ENST00000520752 NXF1Q9UBU9 619 aaKnown RBP10.17□□□□□ -0.78
SHPRH-208ENST00000520752 RRP15Q9Y3B9 282 aaKnown RBP10.17□□□□□ -0.78
SHPRH-208ENST00000520752 MRVI1Q9Y6F6 885 aa10.17□□□□□ -0.78
SHPRH-208ENST00000520752 ABCC2Q92887 1545 aa10.17□□□□□ -0.78
SHPRH-208ENST00000520752 CTAGE5O15320 804 aa10.16□□□□□ -0.78
SHPRH-208ENST00000520752 RPS6KA5O75582 802 aa10.16□□□□□ -0.78
SHPRH-208ENST00000520752 EIF1AXP47813 144 aaKnown RBP10.16□□□□□ -0.78
SHPRH-208ENST00000520752 ARHGAP4P98171 946 aa10.16□□□□□ -0.78
SHPRH-208ENST00000520752 MLECQ14165 292 aa10.16□□□□□ -0.78
SHPRH-208ENST00000520752 KRBA2Q6ZNG9 492 aa10.16□□□□□ -0.78
SHPRH-208ENST00000520752 BTLAQ7Z6A9 289 aa10.16□□□□□ -0.78
SHPRH-208ENST00000520752 TREML1Q86YW5 311 aa10.16□□□□□ -0.78
SHPRH-208ENST00000520752 C10orf67Q8IYJ2 551 aa10.16□□□□□ -0.78
SHPRH-208ENST00000520752 CCDC191Q8NCU4 936 aa10.16□□□□□ -0.78
SHPRH-208ENST00000520752 EXOC4Q96A65 974 aa10.16□□□□□ -0.78
SHPRH-208ENST00000520752 ZNF837Q96EG3 531 aaPredicted RBP10.16□□□□□ -0.78
SHPRH-208ENST00000520752 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.16□□□□□ -0.78
SHPRH-208ENST00000520752 PCDHGC4Q9Y5F7 938 aa10.16□□□□□ -0.78
SHPRH-208ENST00000520752 ARHGEF12Q9NZN5 1544 aa10.16□□□□□ -0.78
SHPRH-208ENST00000520752 CCDC171Q6TFL3 1326 aa10.15□□□□□ -0.78
SHPRH-208ENST00000520752 SYCE3A1L190 88 aa10.15□□□□□ -0.78
SHPRH-208ENST00000520752 ANKRD33BA6NCL7 494 aa10.15□□□□□ -0.78
SHPRH-208ENST00000520752 SGSM2O43147 1006 aa10.15□□□□□ -0.78
SHPRH-208ENST00000520752 ADCY5O95622 1261 aa10.15□□□□□ -0.78
SHPRH-208ENST00000520752 ANAPC15P60006 121 aa10.15□□□□□ -0.78
SHPRH-208ENST00000520752 ZRSR1Q15695 479 aaKnown RBP10.15□□□□□ -0.78
SHPRH-208ENST00000520752 GPT2Q8TD30 523 aa10.15□□□□□ -0.78
SHPRH-208ENST00000520752 DRC1Q96MC2 740 aa10.15□□□□□ -0.78
SHPRH-208ENST00000520752 A1CFQ9NQ94 594 aaKnown RBP10.15□□□□□ -0.78
SHPRH-208ENST00000520752 ARGLU1Q9NWB6 273 aaPredicted RBP10.15□□□□□ -0.78
SHPRH-208ENST00000520752 TMEM63CQ9P1W3 806 aa10.15□□□□□ -0.78
SHPRH-208ENST00000520752 ELP1O95163 1332 aa10.14□□□□□ -0.79
SHPRH-208ENST00000520752 OPLAHO14841 1288 aa10.14□□□□□ -0.79
SHPRH-208ENST00000520752 TPM1P09493 284 aa10.14□□□□□ -0.79
SHPRH-208ENST00000520752 FAM157BP0CG42 384 aa10.14□□□□□ -0.79
SHPRH-208ENST00000520752 INPP5BP32019 993 aa10.14□□□□□ -0.79
SHPRH-208ENST00000520752 RBM6P78332 1123 aaKnown RBP10.14□□□□□ -0.79
SHPRH-208ENST00000520752 HDAC1Q13547 482 aaPredicted RBP10.14□□□□□ -0.79
SHPRH-208ENST00000520752 SETDB1Q15047 1291 aa10.14□□□□□ -0.79
SHPRH-208ENST00000520752 EP400NLQ6ZTU2 488 aa10.14□□□□□ -0.79
SHPRH-208ENST00000520752 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.14□□□□□ -0.79
SHPRH-208ENST00000520752 UTP14AQ9BVJ6 771 aaKnown RBP10.14□□□□□ -0.79
SHPRH-208ENST00000520752 NDFIP2Q9NV92 336 aa10.14□□□□□ -0.79
SHPRH-208ENST00000520752 LRRFIP2Q9Y608 721 aaKnown RBP10.14□□□□□ -0.79
SHPRH-208ENST00000520752 ROCK1Q13464 1354 aa10.14□□□□□ -0.79
SHPRH-208ENST00000520752 PTPRCP08575 1304 aa10.13□□□□□ -0.79
SHPRH-208ENST00000520752 FAM177BA6PVY3 158 aa10.13□□□□□ -0.79
SHPRH-208ENST00000520752 H0YHG0 523 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms