RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 ANKRD34AQ69YU3 496 aa7.21□□□□□ -1.26
SQLE-204ENST00000520493 SHKBP1Q8TBC3 707 aa7.21□□□□□ -1.26
SQLE-204ENST00000520493 UBASH3BQ8TF42 649 aa7.21□□□□□ -1.26
SQLE-204ENST00000520493 RNF208Q9H0X6 261 aa7.21□□□□□ -1.26
SQLE-204ENST00000520493 SOX17Q9H6I2 414 aaPredicted RBP7.21□□□□□ -1.26
SQLE-204ENST00000520493 LIN7BQ9HAP6 207 aa7.21□□□□□ -1.26
SQLE-204ENST00000520493 ANGEL1Q9UNK9 670 aaKnown RBP7.21□□□□□ -1.26
SQLE-204ENST00000520493 ADAM11O75078 769 aa7.2□□□□□ -1.26
SQLE-204ENST00000520493 FDX2Q6P4F2 183 aa7.2□□□□□ -1.26
SQLE-204ENST00000520493 KIAA1211Q6ZU35 1233 aa7.2□□□□□ -1.26
SQLE-204ENST00000520493 VN1R5Q7Z5H4 357 aa7.2□□□□□ -1.26
SQLE-204ENST00000520493 UTP4Q969X6 686 aaKnown RBP7.2□□□□□ -1.26
SQLE-204ENST00000520493 RUSC1Q9BVN2 902 aa7.2□□□□□ -1.26
SQLE-204ENST00000520493 DNAJC25Q9H1X3 360 aa7.2□□□□□ -1.26
SQLE-204ENST00000520493 A0A1W2PP55 124 aa7.19□□□□□ -1.26
SQLE-204ENST00000520493 DBX1A6NMT0 343 aa7.19□□□□□ -1.26
SQLE-204ENST00000520493 SOX1O00570 391 aaPredicted RBP7.19□□□□□ -1.26
SQLE-204ENST00000520493 TM4SF5O14894 197 aa7.19□□□□□ -1.26
SQLE-204ENST00000520493 HOXA10P31260 410 aaPredicted RBP7.19□□□□□ -1.26
SQLE-204ENST00000520493 ORC1Q13415 861 aa7.19□□□□□ -1.26
SQLE-204ENST00000520493 CCNJLQ8IV13 435 aa7.19□□□□□ -1.26
SQLE-204ENST00000520493 DDX54Q8TDD1 881 aaKnown RBP7.19□□□□□ -1.26
SQLE-204ENST00000520493 USP26Q9BXU7 913 aa7.19□□□□□ -1.26
SQLE-204ENST00000520493 RBCK1Q9BYM8 510 aa7.19□□□□□ -1.26
SQLE-204ENST00000520493 EHD4Q9H223 541 aa7.19□□□□□ -1.26
SQLE-204ENST00000520493 A0A096LPE4 126 aa7.18□□□□□ -1.26
SQLE-204ENST00000520493 A0A1W2PPZ6 126 aa7.18□□□□□ -1.26
SQLE-204ENST00000520493 ESRRAP11474 423 aaPredicted RBP7.18□□□□□ -1.26
SQLE-204ENST00000520493 KIAA0319Q5VV43 1072 aa7.18□□□□□ -1.26
SQLE-204ENST00000520493 NIF3L1Q9GZT8 377 aa7.18□□□□□ -1.26
SQLE-204ENST00000520493 CLEC4MQ9H2X3 399 aaPredicted RBP7.18□□□□□ -1.26
SQLE-204ENST00000520493 DCTN4Q9UJW0 460 aa7.18□□□□□ -1.26
SQLE-204ENST00000520493 METTL12A8MUP2 240 aa7.17□□□□□ -1.26
SQLE-204ENST00000520493 PATL2C9JE40 543 aaKnown RBP7.17□□□□□ -1.26
SQLE-204ENST00000520493 EIF1AYO14602 144 aaKnown RBP7.17□□□□□ -1.26
SQLE-204ENST00000520493 GAS2O43903 313 aaKnown RBP7.17□□□□□ -1.26
SQLE-204ENST00000520493 GSTM4Q03013 218 aa7.17□□□□□ -1.26
SQLE-204ENST00000520493 PCDH1Q08174 1060 aa7.17□□□□□ -1.26
SQLE-204ENST00000520493 HP1BP3Q5SSJ5 553 aaPredicted RBP7.17□□□□□ -1.26
SQLE-204ENST00000520493 NUTM2GQ5VZR2 741 aa7.17□□□□□ -1.26
SQLE-204ENST00000520493 USPL1Q5W0Q7 1092 aa7.17□□□□□ -1.26
SQLE-204ENST00000520493 CBLL1Q75N03 491 aa7.17□□□□□ -1.26
SQLE-204ENST00000520493 ALKBH8Q96BT7 664 aaKnown RBP7.17□□□□□ -1.26
SQLE-204ENST00000520493 ZFYVE1Q9HBF4 777 aa7.17□□□□□ -1.26
SQLE-204ENST00000520493 CYP4F12Q9HCS2 524 aa7.17□□□□□ -1.26
SQLE-204ENST00000520493 NPHS2Q9NP85 383 aa7.17□□□□□ -1.26
SQLE-204ENST00000520493 TRAK1Q9UPV9 953 aa7.17□□□□□ -1.26
SQLE-204ENST00000520493 WDR64B1ANS9 1081 aa7.16□□□□□ -1.26
SQLE-204ENST00000520493 GPR182O15218 404 aa7.16□□□□□ -1.26
SQLE-204ENST00000520493 GADD45BO75293 160 aaPredicted RBP7.16□□□□□ -1.26
SQLE-204ENST00000520493 KCNA1Q09470 495 aa7.16□□□□□ -1.26
SQLE-204ENST00000520493 TP53INP2Q8IXH6 220 aa7.16□□□□□ -1.26
SQLE-204ENST00000520493 CCDC74AQ96AQ1 378 aa7.16□□□□□ -1.26
SQLE-204ENST00000520493 FAM46AQ96IP4 442 aaKnown RBP7.16□□□□□ -1.26
SQLE-204ENST00000520493 MYRFLQ96LU7 910 aa7.16□□□□□ -1.26
SQLE-204ENST00000520493 TCF12Q99081 682 aa7.16□□□□□ -1.26
SQLE-204ENST00000520493 MEGF11A6BM72 1044 aa7.15□□□□□ -1.26
SQLE-204ENST00000520493 CYP11A1P05108 521 aa7.15□□□□□ -1.26
SQLE-204ENST00000520493 ZNF865P0CJ78 1059 aaPredicted RBP7.15□□□□□ -1.26
SQLE-204ENST00000520493 JUNBP17275 347 aaPredicted RBP7.15□□□□□ -1.26
SQLE-204ENST00000520493 ITGB5P18084 799 aa7.15□□□□□ -1.26
SQLE-204ENST00000520493 MAPK1P28482 360 aa7.15□□□□□ -1.26
SQLE-204ENST00000520493 CSRNP1Q96S65 589 aa7.15□□□□□ -1.26
SQLE-204ENST00000520493 HIF3AQ9Y2N7 669 aa7.15□□□□□ -1.26
SQLE-204ENST00000520493 LOC100289279A0A1B0GTE1 492 aa7.14□□□□□ -1.27
SQLE-204ENST00000520493 GRIA4P48058 902 aa7.14□□□□□ -1.27
SQLE-204ENST00000520493 SPRED3Q2MJR0 410 aa7.14□□□□□ -1.27
SQLE-204ENST00000520493 HGSNATQ68CP4 663 aa7.14□□□□□ -1.27
SQLE-204ENST00000520493 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.14□□□□□ -1.27
SQLE-204ENST00000520493 C12orf50Q8NA57 414 aaPredicted RBP7.14□□□□□ -1.27
SQLE-204ENST00000520493 KCNF1Q9H3M0 494 aa7.14□□□□□ -1.27
SQLE-204ENST00000520493 NLRP2Q9NX02 1062 aa7.14□□□□□ -1.27
SQLE-204ENST00000520493 PPP4R2Q9NY27 417 aa7.14□□□□□ -1.27
SQLE-204ENST00000520493 BMP3P12645 472 aa7.13□□□□□ -1.27
SQLE-204ENST00000520493 PREPP48147 710 aa7.13□□□□□ -1.27
SQLE-204ENST00000520493 TMC7Q7Z402 723 aa7.13□□□□□ -1.27
SQLE-204ENST00000520493 FAM20CQ8IXL6 584 aa7.13□□□□□ -1.27
SQLE-204ENST00000520493 CCDC9Q9Y3X0 531 aaKnown RBP7.13□□□□□ -1.27
SQLE-204ENST00000520493 IVNS1ABPQ9Y6Y0 642 aa7.13□□□□□ -1.27
SQLE-204ENST00000520493 IGHA2P01877 340 aa7.12□□□□□ -1.27
SQLE-204ENST00000520493 ITPKAP23677 461 aa7.12□□□□□ -1.27
SQLE-204ENST00000520493 HNRNPUQ00839 825 aaKnown RBP eCLIP7.12□□□□□ -1.27
SQLE-204ENST00000520493 PTPN12Q05209 780 aaKnown RBP7.12□□□□□ -1.27
SQLE-204ENST00000520493 EXOSC6Q5RKV6 272 aaKnown RBP7.12□□□□□ -1.27
SQLE-204ENST00000520493 PRPF40BQ6NWY9 871 aaKnown RBP7.12□□□□□ -1.27
SQLE-204ENST00000520493 CLEC10AQ8IUN9 316 aa7.12□□□□□ -1.27
SQLE-204ENST00000520493 ZSCAN29Q8IWY8 852 aaPredicted RBP7.12□□□□□ -1.27
SQLE-204ENST00000520493 SMG8Q8ND04 991 aaKnown RBP7.12□□□□□ -1.27
SQLE-204ENST00000520493 FAM83CQ9BQN1 747 aa7.12□□□□□ -1.27
SQLE-204ENST00000520493 CORO1BQ9BR76 489 aa7.12□□□□□ -1.27
SQLE-204ENST00000520493 TMPRSS13Q9BYE2 586 aa7.12□□□□□ -1.27
SQLE-204ENST00000520493 ZNF576Q9H609 170 aa7.12□□□□□ -1.27
SQLE-204ENST00000520493 SUGCTQ9HAC7 445 aa7.12□□□□□ -1.27
SQLE-204ENST00000520493 PIM2Q9P1W9 311 aa7.12□□□□□ -1.27
SQLE-204ENST00000520493 CCDC39Q9UFE4 941 aa7.12□□□□□ -1.27
SQLE-204ENST00000520493 B3GALT4O96024 378 aa7.11□□□□□ -1.27
SQLE-204ENST00000520493 PLCB3Q01970 1234 aa7.11□□□□□ -1.27
SQLE-204ENST00000520493 POU4F3Q15319 338 aa7.11□□□□□ -1.27
SQLE-204ENST00000520493 ZNF423Q2M1K9 1284 aa7.11□□□□□ -1.27
SQLE-204ENST00000520493 BEND4Q6ZU67 534 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms