RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 MSX1P28360 303 aa6.23□□□□□ -1.41
SDC2-204ENST00000519914 MAP2K3P46734 347 aa6.23□□□□□ -1.41
SDC2-204ENST00000519914 CEBPAP49715 358 aaPredicted RBP6.23□□□□□ -1.41
SDC2-204ENST00000519914 C4orf17Q53FE4 359 aa6.23□□□□□ -1.41
SDC2-204ENST00000519914 C1orf229Q6ZS94 237 aaPredicted RBP6.23□□□□□ -1.41
SDC2-204ENST00000519914 MCM10Q7L590 875 aa6.23□□□□□ -1.41
SDC2-204ENST00000519914 PGBD3Q8N328 593 aa6.23□□□□□ -1.41
SDC2-204ENST00000519914 RTF1Q92541 710 aaKnown RBP6.23□□□□□ -1.41
SDC2-204ENST00000519914 SPOCK3Q9BQ16 436 aa6.23□□□□□ -1.41
SDC2-204ENST00000519914 CFHR5Q9BXR6 569 aa6.23□□□□□ -1.41
SDC2-204ENST00000519914 C1orf115Q9H7X2 142 aa6.23□□□□□ -1.41
SDC2-204ENST00000519914 TBC1D2BQ9UPU7 963 aa6.23□□□□□ -1.41
SDC2-204ENST00000519914 A0A1B0GTH6 734 aa6.22□□□□□ -1.41
SDC2-204ENST00000519914 GNAT3A8MTJ3 354 aa6.22□□□□□ -1.41
SDC2-204ENST00000519914 ELL2O00472 640 aaPredicted RBP6.22□□□□□ -1.41
SDC2-204ENST00000519914 HMMRO75330 724 aa6.22□□□□□ -1.41
SDC2-204ENST00000519914 ITGB2P05107 769 aa6.22□□□□□ -1.41
SDC2-204ENST00000519914 KCNA6P17658 529 aa6.22□□□□□ -1.41
SDC2-204ENST00000519914 RAB3GAP1Q15042 981 aa6.22□□□□□ -1.41
SDC2-204ENST00000519914 RABEP1Q15276 862 aa6.22□□□□□ -1.41
SDC2-204ENST00000519914 OXLD1Q5BKU9 147 aa6.22□□□□□ -1.41
SDC2-204ENST00000519914 L1TD1Q5T7N2 865 aaKnown RBP6.22□□□□□ -1.41
SDC2-204ENST00000519914 NGDNQ8NEJ9 315 aaKnown RBP6.22□□□□□ -1.41
SDC2-204ENST00000519914 IP6K1Q92551 441 aa6.22□□□□□ -1.41
SDC2-204ENST00000519914 CHMP4AQ9BY43 222 aa6.22□□□□□ -1.41
SDC2-204ENST00000519914 SLKQ9H2G2 1235 aaPredicted RBP6.22□□□□□ -1.41
SDC2-204ENST00000519914 TSPYL4Q9UJ04 414 aa6.22□□□□□ -1.41
SDC2-204ENST00000519914 DOLKQ9UPQ8 538 aa6.22□□□□□ -1.41
SDC2-204ENST00000519914 PHF24Q9UPV7 400 aa6.22□□□□□ -1.41
SDC2-204ENST00000519914 AOX1Q06278 1338 aa6.21□□□□□ -1.41
SDC2-204ENST00000519914 RGPD2P0DJD1 1756 aa6.21□□□□□ -1.42
SDC2-204ENST00000519914 K7ELQ4 463 aaPredicted RBP6.21□□□□□ -1.42
SDC2-204ENST00000519914 APBB1O00213 710 aa6.21□□□□□ -1.42
SDC2-204ENST00000519914 AMPD1P23109 780 aa6.21□□□□□ -1.42
SDC2-204ENST00000519914 AMPHP49418 695 aa6.21□□□□□ -1.42
SDC2-204ENST00000519914 KRT24Q2M2I5 525 aa6.21□□□□□ -1.42
SDC2-204ENST00000519914 ESCO1Q5FWF5 840 aa6.21□□□□□ -1.42
SDC2-204ENST00000519914 CCDC30Q5VVM6 783 aa6.21□□□□□ -1.42
SDC2-204ENST00000519914 EDARADDQ8WWZ3 215 aa6.21□□□□□ -1.42
SDC2-204ENST00000519914 ABHD17AQ96GS6 310 aa6.21□□□□□ -1.42
SDC2-204ENST00000519914 MEIS3Q99687 375 aa6.21□□□□□ -1.42
SDC2-204ENST00000519914 USP26Q9BXU7 913 aa6.21□□□□□ -1.42
SDC2-204ENST00000519914 FHDC1Q9C0D6 1143 aaPredicted RBP6.21□□□□□ -1.42
SDC2-204ENST00000519914 STAP2Q9UGK3 403 aa6.21□□□□□ -1.42
SDC2-204ENST00000519914 HRH3Q9Y5N1 445 aa6.21□□□□□ -1.42
SDC2-204ENST00000519914 FOXO3O43524 673 aa6.2□□□□□ -1.42
SDC2-204ENST00000519914 GNAI2P04899 355 aa6.2□□□□□ -1.42
SDC2-204ENST00000519914 GNAI3P08754 354 aa6.2□□□□□ -1.42
SDC2-204ENST00000519914 BMP4P12644 408 aa6.2□□□□□ -1.42
SDC2-204ENST00000519914 ATP8B2P98198 1209 aa6.2□□□□□ -1.42
SDC2-204ENST00000519914 CTBSQ01459 385 aa6.2□□□□□ -1.42
SDC2-204ENST00000519914 FLIIQ13045 1269 aa6.2□□□□□ -1.42
SDC2-204ENST00000519914 USP4Q13107 963 aa6.2□□□□□ -1.42
SDC2-204ENST00000519914 TLR1Q15399 786 aa6.2□□□□□ -1.42
SDC2-204ENST00000519914 TAF7Q15545 349 aaPredicted RBP6.2□□□□□ -1.42
SDC2-204ENST00000519914 SLFNL1Q499Z3 407 aa6.2□□□□□ -1.42
SDC2-204ENST00000519914 EFHC2Q5JST6 749 aa6.2□□□□□ -1.42
SDC2-204ENST00000519914 RNF135Q8IUD6 432 aa6.2□□□□□ -1.42
SDC2-204ENST00000519914 IL17REQ8NFR9 667 aa6.2□□□□□ -1.42
SDC2-204ENST00000519914 ARXQ96QS3 562 aa6.2□□□□□ -1.42
SDC2-204ENST00000519914 ETNK1Q9HBU6 452 aa6.2□□□□□ -1.42
SDC2-204ENST00000519914 ALS2Q96Q42 1657 aa6.2□□□□□ -1.42
SDC2-204ENST00000519914 AK9Q5TCS8 1911 aa6.19□□□□□ -1.42
SDC2-204ENST00000519914 HEG1Q9ULI3 1381 aa6.19□□□□□ -1.42
SDC2-204ENST00000519914 C2CD2LO14523 706 aa6.19□□□□□ -1.42
SDC2-204ENST00000519914 CYP2E1P05181 493 aaPredicted RBP6.19□□□□□ -1.42
SDC2-204ENST00000519914 SDSP20132 328 aa6.19□□□□□ -1.42
SDC2-204ENST00000519914 PLA2G4AP47712 749 aa6.19□□□□□ -1.42
SDC2-204ENST00000519914 VAC14Q08AM6 782 aa6.19□□□□□ -1.42
SDC2-204ENST00000519914 SKOR2Q2VWA4 1001 aaPredicted RBP6.19□□□□□ -1.42
SDC2-204ENST00000519914 G2E3Q7L622 706 aa6.19□□□□□ -1.42
SDC2-204ENST00000519914 KCNH5Q8NCM2 988 aa6.19□□□□□ -1.42
SDC2-204ENST00000519914 AIDAQ96BJ3 306 aa6.19□□□□□ -1.42
SDC2-204ENST00000519914 STK31Q9BXU1 1019 aa6.19□□□□□ -1.42
SDC2-204ENST00000519914 SRCIN1Q9C0H9 1055 aa6.19□□□□□ -1.42
SDC2-204ENST00000519914 NPHP4O75161 1426 aaPredicted RBP6.18□□□□□ -1.42
SDC2-204ENST00000519914 SCN11AQ9UI33 1791 aa6.18□□□□□ -1.42
SDC2-204ENST00000519914 KRBA1A5PL33 1030 aa6.18□□□□□ -1.42
SDC2-204ENST00000519914 BNIP3LO60238 219 aa6.18□□□□□ -1.42
SDC2-204ENST00000519914 RAB11FIP3O75154 756 aa6.18□□□□□ -1.42
SDC2-204ENST00000519914 REC8O95072 547 aa6.18□□□□□ -1.42
SDC2-204ENST00000519914 FGFR3P22607 806 aa6.18□□□□□ -1.42
SDC2-204ENST00000519914 PDE1AP54750 535 aa6.18□□□□□ -1.42
SDC2-204ENST00000519914 ANAPC15P60006 121 aa6.18□□□□□ -1.42
SDC2-204ENST00000519914 UBAP2LQ14157 1087 aaKnown RBP6.18□□□□□ -1.42
SDC2-204ENST00000519914 CASC1Q6TDU7 716 aa6.18□□□□□ -1.42
SDC2-204ENST00000519914 ANKLE2Q86XL3 938 aa6.18□□□□□ -1.42
SDC2-204ENST00000519914 PHTF2Q8N3S3 785 aa6.18□□□□□ -1.42
SDC2-204ENST00000519914 SSH3Q8TE77 659 aa6.18□□□□□ -1.42
SDC2-204ENST00000519914 RHBDD1Q8TEB9 315 aa6.18□□□□□ -1.42
SDC2-204ENST00000519914 GBP4Q96PP9 640 aa6.18□□□□□ -1.42
SDC2-204ENST00000519914 CWC22Q9HCG8 908 aaKnown RBP6.18□□□□□ -1.42
SDC2-204ENST00000519914 LRRC4BQ9NT99 713 aa6.18□□□□□ -1.42
SDC2-204ENST00000519914 GGA1Q9UJY5 639 aa6.18□□□□□ -1.42
SDC2-204ENST00000519914 MKL2Q9ULH7 1088 aa6.18□□□□□ -1.42
SDC2-204ENST00000519914 USP42Q9H9J4 1324 aaKnown RBP6.18□□□□□ -1.42
SDC2-204ENST00000519914 COL18A1P39060 1754 aa6.17□□□□□ -1.42
SDC2-204ENST00000519914 ERC2O15083 957 aa6.17□□□□□ -1.42
SDC2-204ENST00000519914 ADAM23O75077 832 aa6.17□□□□□ -1.42
SDC2-204ENST00000519914 PROCP04070 461 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms