RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 BRI3BPQ8WY22 251 aa11.08□□□□□ -0.64
TRIM35-202ENST00000519219 OPTNQ96CV9 577 aa11.08□□□□□ -0.64
TRIM35-202ENST00000519219 MS4A4AQ96JQ5 239 aa11.08□□□□□ -0.64
TRIM35-202ENST00000519219 C9orf78Q9NZ63 289 aaPredicted RBP11.08□□□□□ -0.64
TRIM35-202ENST00000519219 BRCA2P51587 3418 aa11.08□□□□□ -0.64
TRIM35-202ENST00000519219 TESPA1A2RU30 521 aaPredicted RBP11.07□□□□□ -0.64
TRIM35-202ENST00000519219 HIBADHP31937 336 aaKnown RBP11.07□□□□□ -0.64
TRIM35-202ENST00000519219 CRKP46108 304 aa11.07□□□□□ -0.64
TRIM35-202ENST00000519219 INHBEP58166 350 aa11.07□□□□□ -0.64
TRIM35-202ENST00000519219 CHAF1AQ13111 956 aaPredicted RBP11.07□□□□□ -0.64
TRIM35-202ENST00000519219 NCBP3Q53F19 620 aaKnown RBP11.07□□□□□ -0.64
TRIM35-202ENST00000519219 ANKRD13AQ8IZ07 590 aa11.07□□□□□ -0.64
TRIM35-202ENST00000519219 ANKRD44Q8N8A2 993 aa11.07□□□□□ -0.64
TRIM35-202ENST00000519219 KLHDC4Q8TBB5 520 aa11.07□□□□□ -0.64
TRIM35-202ENST00000519219 PTPN22Q9Y2R2 807 aa11.07□□□□□ -0.64
TRIM35-202ENST00000519219 RIPOR2Q9Y4F9 1068 aa11.07□□□□□ -0.64
TRIM35-202ENST00000519219 AK9Q5TCS8 1911 aa11.07□□□□□ -0.64
TRIM35-202ENST00000519219 ALDH1L1O75891 902 aa11.06□□□□□ -0.64
TRIM35-202ENST00000519219 EN2P19622 333 aaPredicted RBP11.06□□□□□ -0.64
TRIM35-202ENST00000519219 VGLL4Q14135 290 aa11.06□□□□□ -0.64
TRIM35-202ENST00000519219 UBE4AQ14139 1066 aa11.06□□□□□ -0.64
TRIM35-202ENST00000519219 FAM43AQ8N2R8 423 aa11.06□□□□□ -0.64
TRIM35-202ENST00000519219 SRCIN1Q9C0H9 1055 aa11.06□□□□□ -0.64
TRIM35-202ENST00000519219 BICC1Q9H694 974 aaKnown RBP11.06□□□□□ -0.64
TRIM35-202ENST00000519219 SERPINA10Q9UK55 444 aa11.06□□□□□ -0.64
TRIM35-202ENST00000519219 SP3Q02447 781 aa11.05□□□□□ -0.64
TRIM35-202ENST00000519219 FBXO33Q7Z6M2 555 aa11.05□□□□□ -0.64
TRIM35-202ENST00000519219 VGLL2Q8N8G2 317 aa11.05□□□□□ -0.64
TRIM35-202ENST00000519219 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.05□□□□□ -0.64
TRIM35-202ENST00000519219 OTUD5Q96G74 571 aa11.05□□□□□ -0.64
TRIM35-202ENST00000519219 ERO1AQ96HE7 468 aa11.05□□□□□ -0.64
TRIM35-202ENST00000519219 CCL15-CCL14A0A0B4J2E2 113 aa11.04□□□□□ -0.64
TRIM35-202ENST00000519219 UNCXA6NJT0 531 aa11.04□□□□□ -0.64
TRIM35-202ENST00000519219 ECM2O94769 699 aaPredicted RBP11.04□□□□□ -0.64
TRIM35-202ENST00000519219 BCAMP50895 628 aa11.04□□□□□ -0.64
TRIM35-202ENST00000519219 CCL15Q16663 113 aa11.04□□□□□ -0.64
TRIM35-202ENST00000519219 ARMC5Q96C12 935 aa11.04□□□□□ -0.64
TRIM35-202ENST00000519219 ARHGAP39Q9C0H5 1083 aa11.04□□□□□ -0.64
TRIM35-202ENST00000519219 EFCC1Q9HA90 598 aa11.04□□□□□ -0.64
TRIM35-202ENST00000519219 PTCH2Q9Y6C5 1203 aa11.04□□□□□ -0.64
TRIM35-202ENST00000519219 SNCAIPQ9Y6H5 919 aa11.04□□□□□ -0.64
TRIM35-202ENST00000519219 CEP290O15078 2479 aa11.04□□□□□ -0.64
TRIM35-202ENST00000519219 UTYO14607 1347 aa11.04□□□□□ -0.64
TRIM35-202ENST00000519219 MYCP01106 439 aaPredicted RBP11.03□□□□□ -0.64
TRIM35-202ENST00000519219 MAP3K9P80192 1104 aa11.03□□□□□ -0.64
TRIM35-202ENST00000519219 TNFAIP1Q13829 316 aa11.03□□□□□ -0.64
TRIM35-202ENST00000519219 TAF1CQ15572 869 aaPredicted RBP11.03□□□□□ -0.64
TRIM35-202ENST00000519219 RABL6Q3YEC7 729 aaPredicted RBP11.03□□□□□ -0.64
TRIM35-202ENST00000519219 METTL24Q5JXM2 366 aa11.03□□□□□ -0.64
TRIM35-202ENST00000519219 FAM9BQ8IZU0 186 aa11.03□□□□□ -0.64
TRIM35-202ENST00000519219 ZKSCAN4Q969J2 545 aaPredicted RBP11.03□□□□□ -0.64
TRIM35-202ENST00000519219 MROH5Q6ZUA9 1318 aa11.03□□□□□ -0.64
TRIM35-202ENST00000519219 ZNF521Q96K83 1311 aa11.03□□□□□ -0.64
TRIM35-202ENST00000519219 SPDYE5A6NIY4 337 aa11.02□□□□□ -0.65
TRIM35-202ENST00000519219 OTUD7BQ6GQQ9 843 aa11.02□□□□□ -0.65
TRIM35-202ENST00000519219 APOBEC3HQ6NTF7 200 aaKnown RBP11.02□□□□□ -0.65
TRIM35-202ENST00000519219 MRPL50Q8N5N7 158 aaKnown RBP11.02□□□□□ -0.65
TRIM35-202ENST00000519219 ZNF333Q96JL9 665 aa11.02□□□□□ -0.65
TRIM35-202ENST00000519219 BTBD19C9JJ37 291 aa11.01□□□□□ -0.65
TRIM35-202ENST00000519219 ANP32CO43423 234 aa11.01□□□□□ -0.65
TRIM35-202ENST00000519219 FGFR2P21802 821 aa11.01□□□□□ -0.65
TRIM35-202ENST00000519219 CTGFP29279 349 aa11.01□□□□□ -0.65
TRIM35-202ENST00000519219 GTF2A2P52657 109 aa11.01□□□□□ -0.65
TRIM35-202ENST00000519219 HABP4Q5JVS0 413 aaKnown RBP11.01□□□□□ -0.65
TRIM35-202ENST00000519219 INTS3Q68E01 1043 aaKnown RBP11.01□□□□□ -0.65
TRIM35-202ENST00000519219 VPS37DQ86XT2 251 aa11.01□□□□□ -0.65
TRIM35-202ENST00000519219 TEKT1Q969V4 418 aa11.01□□□□□ -0.65
TRIM35-202ENST00000519219 WRNIP1Q96S55 665 aa11.01□□□□□ -0.65
TRIM35-202ENST00000519219 CSADQ9Y600 493 aa11.01□□□□□ -0.65
TRIM35-202ENST00000519219 MGAMO43451 1857 aa11.01□□□□□ -0.65
TRIM35-202ENST00000519219 MYH2Q9UKX2 1941 aa11.01□□□□□ -0.65
TRIM35-202ENST00000519219 TRIOBPQ9H2D6 2365 aa11.01□□□□□ -0.65
TRIM35-202ENST00000519219 DOCK2Q92608 1830 aa11□□□□□ -0.65
TRIM35-202ENST00000519219 PTPRFP10586 1907 aa11□□□□□ -0.65
TRIM35-202ENST00000519219 IRF6O14896 467 aa11□□□□□ -0.65
TRIM35-202ENST00000519219 FRAT2O75474 233 aaPredicted RBP11□□□□□ -0.65
TRIM35-202ENST00000519219 PDE8BO95263 885 aa11□□□□□ -0.65
TRIM35-202ENST00000519219 INPP5BP32019 993 aa11□□□□□ -0.65
TRIM35-202ENST00000519219 RFX5P48382 616 aaPredicted RBP11□□□□□ -0.65
TRIM35-202ENST00000519219 TNNI2P48788 182 aa11□□□□□ -0.65
TRIM35-202ENST00000519219 MIGA2Q7L4E1 593 aa11□□□□□ -0.65
TRIM35-202ENST00000519219 SH3TC2Q8TF17 1288 aa11□□□□□ -0.65
TRIM35-202ENST00000519219 ZDHHC15Q96MV8 337 aa11□□□□□ -0.65
TRIM35-202ENST00000519219 USP44Q9H0E7 712 aa11□□□□□ -0.65
TRIM35-202ENST00000519219 ZFYVE28Q9HCC9 887 aa11□□□□□ -0.65
TRIM35-202ENST00000519219 HDLBPQ00341 1268 aaKnown RBP10.99□□□□□ -0.65
TRIM35-202ENST00000519219 DIXDC1Q155Q3 683 aa10.99□□□□□ -0.65
TRIM35-202ENST00000519219 SLC9C1Q4G0N8 1177 aa10.99□□□□□ -0.65
TRIM35-202ENST00000519219 CAVIN4Q5BKX8 364 aa10.99□□□□□ -0.65
TRIM35-202ENST00000519219 TBC1D22AQ8WUA7 517 aa10.99□□□□□ -0.65
TRIM35-202ENST00000519219 SSH1Q8WYL5 1049 aa10.99□□□□□ -0.65
TRIM35-202ENST00000519219 DOCK3Q8IZD9 2030 aa10.99□□□□□ -0.65
TRIM35-202ENST00000519219 PHIPQ8WWQ0 1821 aa10.98□□□□□ -0.65
TRIM35-202ENST00000519219 TLR2O60603 784 aa10.98□□□□□ -0.65
TRIM35-202ENST00000519219 SLURP2P0DP57 97 aa10.98□□□□□ -0.65
TRIM35-202ENST00000519219 PRDX5P30044 214 aa10.98□□□□□ -0.65
TRIM35-202ENST00000519219 LACTBP83111 547 aaPredicted RBP10.98□□□□□ -0.65
TRIM35-202ENST00000519219 TCP10Q12799 353 aa10.98□□□□□ -0.65
TRIM35-202ENST00000519219 NFIAQ12857 509 aa10.98□□□□□ -0.65
TRIM35-202ENST00000519219 ATG9AQ7Z3C6 839 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms