RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 TRIM52Q96A61 297 aa9.37□□□□□ -0.91
CLK4-202ENST00000519132 XAGE2Q96GT9 111 aa9.37□□□□□ -0.91
CLK4-202ENST00000519132 HS3ST6Q96QI5 342 aa9.37□□□□□ -0.91
CLK4-202ENST00000519132 ELP3Q9H9T3 547 aa9.37□□□□□ -0.91
CLK4-202ENST00000519132 CHMP3Q9Y3E7 222 aa9.37□□□□□ -0.91
CLK4-202ENST00000519132 NUP155O75694 1391 aa9.37□□□□□ -0.91
CLK4-202ENST00000519132 LMTK2Q8IWU2 1503 aa9.37□□□□□ -0.91
CLK4-202ENST00000519132 PLA2G4AP47712 749 aa9.37□□□□□ -0.91
CLK4-202ENST00000519132 SOX9P48436 509 aa9.37□□□□□ -0.91
CLK4-202ENST00000519132 PEAR1Q5VY43 1037 aaPredicted RBP9.37□□□□□ -0.91
CLK4-202ENST00000519132 KCTD12Q96CX2 325 aaKnown RBP9.37□□□□□ -0.91
CLK4-202ENST00000519132 MAP4K5Q9Y4K4 846 aa9.37□□□□□ -0.91
CLK4-202ENST00000519132 PF4P02776 101 aa9.36□□□□□ -0.91
CLK4-202ENST00000519132 TEAD4Q15561 434 aa9.36□□□□□ -0.91
CLK4-202ENST00000519132 C1orf53Q5VUE5 145 aa9.36□□□□□ -0.91
CLK4-202ENST00000519132 PRPF40BQ6NWY9 871 aaKnown RBP9.36□□□□□ -0.91
CLK4-202ENST00000519132 SPOCK3Q9BQ16 436 aa9.36□□□□□ -0.91
CLK4-202ENST00000519132 CHMP4BQ9H444 224 aaKnown RBP9.36□□□□□ -0.91
CLK4-202ENST00000519132 SIRPGQ9P1W8 387 aa9.36□□□□□ -0.91
CLK4-202ENST00000519132 AKAP2Q9Y2D5 859 aa9.36□□□□□ -0.91
CLK4-202ENST00000519132 METTL12A8MUP2 240 aa9.36□□□□□ -0.91
CLK4-202ENST00000519132 PTPN5P54829 565 aa9.36□□□□□ -0.91
CLK4-202ENST00000519132 RELBQ01201 579 aa9.36□□□□□ -0.91
CLK4-202ENST00000519132 TMEM74Q96NL1 305 aa9.36□□□□□ -0.91
CLK4-202ENST00000519132 RTCBQ9Y3I0 505 aaKnown RBP9.36□□□□□ -0.91
CLK4-202ENST00000519132 PAGE1O75459 146 aa9.36□□□□□ -0.91
CLK4-202ENST00000519132 WNT7BP56706 349 aa9.36□□□□□ -0.91
CLK4-202ENST00000519132 MAPK8IP1Q9UQF2 711 aa9.36□□□□□ -0.91
CLK4-202ENST00000519132 UBAP1LF5GYI3 381 aa9.35□□□□□ -0.91
CLK4-202ENST00000519132 SNPHO15079 494 aa9.35□□□□□ -0.91
CLK4-202ENST00000519132 PCSK2P16519 638 aa9.35□□□□□ -0.91
CLK4-202ENST00000519132 GARTP22102 1010 aa9.35□□□□□ -0.91
CLK4-202ENST00000519132 HIRAP54198 1017 aaPredicted RBP9.35□□□□□ -0.91
CLK4-202ENST00000519132 CBX2Q14781 532 aaPredicted RBP9.35□□□□□ -0.91
CLK4-202ENST00000519132 SEZ6Q53EL9 994 aa9.35□□□□□ -0.91
CLK4-202ENST00000519132 LARP1BQ659C4 914 aaKnown RBP9.35□□□□□ -0.91
CLK4-202ENST00000519132 EID1Q9Y6B2 187 aa9.35□□□□□ -0.91
CLK4-202ENST00000519132 E9PCH4 1651 aa9.35□□□□□ -0.91
CLK4-202ENST00000519132 APOBRQ0VD83 1088 aa9.35□□□□□ -0.91
CLK4-202ENST00000519132 HSP90AB2PQ58FF8 381 aa9.35□□□□□ -0.91
CLK4-202ENST00000519132 NBPF6Q5VWK0 638 aa9.35□□□□□ -0.91
CLK4-202ENST00000519132 THSD4Q6ZMP0 1018 aa9.35□□□□□ -0.91
CLK4-202ENST00000519132 SNX29Q8TEQ0 813 aa9.35□□□□□ -0.91
CLK4-202ENST00000519132 APPBP2Q92624 585 aa9.35□□□□□ -0.91
CLK4-202ENST00000519132 RHOVQ96L33 236 aa9.35□□□□□ -0.91
CLK4-202ENST00000519132 NBPF4Q96M43 638 aa9.35□□□□□ -0.91
CLK4-202ENST00000519132 ESCO1Q5FWF5 840 aa9.34□□□□□ -0.91
CLK4-202ENST00000519132 RUFY4Q6ZNE9 571 aa9.34□□□□□ -0.91
CLK4-202ENST00000519132 CEP152O94986 1710 aa9.34□□□□□ -0.91
CLK4-202ENST00000519132 ANKRD30BQ9BXX2 1392 aa9.34□□□□□ -0.91
CLK4-202ENST00000519132 SIGLEC1Q9BZZ2 1709 aa9.34□□□□□ -0.91
CLK4-202ENST00000519132 VARSP26640 1264 aaKnown RBP9.34□□□□□ -0.91
CLK4-202ENST00000519132 MAP9Q49MG5 647 aa9.34□□□□□ -0.91
CLK4-202ENST00000519132 BNC2Q6ZN30 1099 aaPredicted RBP9.34□□□□□ -0.91
CLK4-202ENST00000519132 PRKAG3Q9UGI9 489 aa9.34□□□□□ -0.91
CLK4-202ENST00000519132 PCNX4Q63HM2 1172 aa9.34□□□□□ -0.92
CLK4-202ENST00000519132 OTUD5Q96G74 571 aa9.34□□□□□ -0.92
CLK4-202ENST00000519132 KANK1Q14678 1352 aa9.33□□□□□ -0.92
CLK4-202ENST00000519132 RASIP1Q5U651 963 aa9.33□□□□□ -0.92
CLK4-202ENST00000519132 APBB1IPQ7Z5R6 666 aaPredicted RBP9.33□□□□□ -0.92
CLK4-202ENST00000519132 MSRB2Q9Y3D2 182 aa9.33□□□□□ -0.92
CLK4-202ENST00000519132 EFCAB6Q5THR3 1501 aa9.33□□□□□ -0.92
CLK4-202ENST00000519132 IRS4O14654 1257 aaPredicted RBP9.33□□□□□ -0.92
CLK4-202ENST00000519132 KIF3BO15066 747 aa9.33□□□□□ -0.92
CLK4-202ENST00000519132 DDR2Q16832 855 aa9.33□□□□□ -0.92
CLK4-202ENST00000519132 PHC3Q8NDX5 983 aa9.33□□□□□ -0.92
CLK4-202ENST00000519132 SUSD3Q96L08 255 aa9.33□□□□□ -0.92
CLK4-202ENST00000519132 CHST12Q9NRB3 414 aa9.33□□□□□ -0.92
CLK4-202ENST00000519132 ANKIB1Q9P2G1 1089 aa9.33□□□□□ -0.92
CLK4-202ENST00000519132 SPHKAPQ2M3C7 1700 aa9.32□□□□□ -0.92
CLK4-202ENST00000519132 RNF223E7ERA6 249 aa9.32□□□□□ -0.92
CLK4-202ENST00000519132 CLN3Q13286 438 aa9.32□□□□□ -0.92
CLK4-202ENST00000519132 HHIPQ96QV1 700 aa9.32□□□□□ -0.92
CLK4-202ENST00000519132 CAMSAP1Q5T5Y3 1602 aa9.32□□□□□ -0.92
CLK4-202ENST00000519132 ZNF157P51786 506 aaPredicted RBP9.32□□□□□ -0.92
CLK4-202ENST00000519132 RC3H1Q5TC82 1133 aaKnown RBP9.32□□□□□ -0.92
CLK4-202ENST00000519132 BRINP2Q9C0B6 783 aa9.32□□□□□ -0.92
CLK4-202ENST00000519132 RPRD2Q5VT52 1461 aaKnown RBP9.32□□□□□ -0.92
CLK4-202ENST00000519132 ASMTLO95671 621 aa9.31□□□□□ -0.92
CLK4-202ENST00000519132 ITPKCQ96DU7 683 aa9.31□□□□□ -0.92
CLK4-202ENST00000519132 FRMD6Q96NE9 622 aa9.31□□□□□ -0.92
CLK4-202ENST00000519132 SRRTQ9BXP5 876 aaKnown RBP9.31□□□□□ -0.92
CLK4-202ENST00000519132 ABCC3O15438 1527 aa9.31□□□□□ -0.92
CLK4-202ENST00000519132 CCDC181Q5TID7 509 aa9.31□□□□□ -0.92
CLK4-202ENST00000519132 FTSJ3Q8IY81 847 aaKnown RBP9.31□□□□□ -0.92
CLK4-202ENST00000519132 MKL1Q969V6 931 aa9.31□□□□□ -0.92
CLK4-202ENST00000519132 CDK15Q96Q40 435 aa9.31□□□□□ -0.92
CLK4-202ENST00000519132 TMEM260Q9NX78 707 aa9.31□□□□□ -0.92
CLK4-202ENST00000519132 BRDTQ58F21 947 aaPredicted RBP9.31□□□□□ -0.92
CLK4-202ENST00000519132 R3HCC1Q9Y3T6 440 aaKnown RBP9.31□□□□□ -0.92
CLK4-202ENST00000519132 ADH1CP00326 375 aa9.3□□□□□ -0.92
CLK4-202ENST00000519132 INPP5BP32019 993 aa9.3□□□□□ -0.92
CLK4-202ENST00000519132 RHBDL3P58872 404 aa9.3□□□□□ -0.92
CLK4-202ENST00000519132 AXDND1Q5T1B0 1012 aaPredicted RBP9.3□□□□□ -0.92
CLK4-202ENST00000519132 RHPN1Q8TCX5 695 aa9.3□□□□□ -0.92
CLK4-202ENST00000519132 STAC3Q96MF2 364 aa9.3□□□□□ -0.92
CLK4-202ENST00000519132 PLCD4Q9BRC7 762 aa9.3□□□□□ -0.92
CLK4-202ENST00000519132 PTCH2Q9Y6C5 1203 aa9.3□□□□□ -0.92
CLK4-202ENST00000519132 TRPM2O94759 1503 aa9.3□□□□□ -0.92
CLK4-202ENST00000519132 TGFBR3LH3BV60 316 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms