RNA–Protein interactions for RNA: ENST00000519060.6

MSR1-210, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5

Gene MSR1, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-210ENST00000519060 ZNF408Q9H9D4 720 aa12.2□□□□□ -0.46
MSR1-210ENST00000519060 PCDHGC3Q9UN70 934 aa12.2□□□□□ -0.46
MSR1-210ENST00000519060 FMNL1O95466 1100 aaPredicted RBP12.19□□□□□ -0.46
MSR1-210ENST00000519060 BRICD5Q6PL45 260 aa12.19□□□□□ -0.46
MSR1-210ENST00000519060 THAP11Q96EK4 314 aa12.19□□□□□ -0.46
MSR1-210ENST00000519060 KCNQ5Q9NR82 932 aa12.19□□□□□ -0.46
MSR1-210ENST00000519060 POLR3EQ9NVU0 708 aa12.19□□□□□ -0.46
MSR1-210ENST00000519060 LAMB4A4D0S4 1761 aa12.19□□□□□ -0.46
MSR1-210ENST00000519060 PSMD14O00487 310 aa12.18□□□□□ -0.46
MSR1-210ENST00000519060 CA12O43570 354 aa12.18□□□□□ -0.46
MSR1-210ENST00000519060 WASHC4Q2M389 1173 aa12.18□□□□□ -0.46
MSR1-210ENST00000519060 TMC4Q7Z404 712 aa12.18□□□□□ -0.46
MSR1-210ENST00000519060 NKX2-3Q8TAU0 364 aa12.18□□□□□ -0.46
MSR1-210ENST00000519060 DPF2Q92785 391 aa12.18□□□□□ -0.46
MSR1-210ENST00000519060 FAM89AQ96GI7 184 aa12.18□□□□□ -0.46
MSR1-210ENST00000519060 GOPCQ9HD26 462 aa12.18□□□□□ -0.46
MSR1-210ENST00000519060 LIMD1Q9UGP4 676 aa12.18□□□□□ -0.46
MSR1-210ENST00000519060 POLLQ9UGP5 575 aa12.18□□□□□ -0.46
MSR1-210ENST00000519060 NSFL1CQ9UNZ2 370 aaKnown RBP12.18□□□□□ -0.46
MSR1-210ENST00000519060 CDHR2Q9BYE9 1310 aa12.17□□□□□ -0.46
MSR1-210ENST00000519060 ATP5J2-PTCD1G3V325 749 aa12.17□□□□□ -0.46
MSR1-210ENST00000519060 TLL1O43897 1013 aa12.17□□□□□ -0.46
MSR1-210ENST00000519060 CLK2P49760 499 aaKnown RBP12.17□□□□□ -0.46
MSR1-210ENST00000519060 MLLT1Q03111 559 aaPredicted RBP12.17□□□□□ -0.46
MSR1-210ENST00000519060 SF3B3Q15393 1217 aaKnown RBP12.17□□□□□ -0.46
MSR1-210ENST00000519060 TUSC1Q2TAM9 212 aa12.17□□□□□ -0.46
MSR1-210ENST00000519060 RNF19BQ6ZMZ0 732 aa12.17□□□□□ -0.46
MSR1-210ENST00000519060 PLBD2Q8NHP8 589 aa12.17□□□□□ -0.46
MSR1-210ENST00000519060 CELF1Q92879 486 aaKnown RBP12.17□□□□□ -0.46
MSR1-210ENST00000519060 SPSB2Q99619 263 aa12.17□□□□□ -0.46
MSR1-210ENST00000519060 ISCA1Q9BUE6 129 aa12.17□□□□□ -0.46
MSR1-210ENST00000519060 MCOLN1Q9GZU1 580 aa12.17□□□□□ -0.46
MSR1-210ENST00000519060 CHPF2Q9P2E5 772 aa12.17□□□□□ -0.46
MSR1-210ENST00000519060 LAS1LQ9Y4W2 734 aaKnown RBP12.17□□□□□ -0.46
MSR1-210ENST00000519060 TRPM7Q96QT4 1865 aa12.17□□□□□ -0.46
MSR1-210ENST00000519060 C6orf229H3BNL8 230 aa12.16□□□□□ -0.46
MSR1-210ENST00000519060 ADH1BP00325 375 aa12.16□□□□□ -0.46
MSR1-210ENST00000519060 EGFRP00533 1210 aa12.16□□□□□ -0.46
MSR1-210ENST00000519060 HUNKP57058 714 aa12.16□□□□□ -0.46
MSR1-210ENST00000519060 GPSM2P81274 684 aa12.16□□□□□ -0.46
MSR1-210ENST00000519060 LMOD3Q0VAK6 560 aa12.16□□□□□ -0.46
MSR1-210ENST00000519060 TBC1D10BQ4KMP7 808 aaPredicted RBP12.16□□□□□ -0.46
MSR1-210ENST00000519060 DBNDD1Q9H9R9 158 aa12.16□□□□□ -0.46
MSR1-210ENST00000519060 PCDHB15Q9Y5E8 787 aa12.16□□□□□ -0.46
MSR1-210ENST00000519060 NOGQ13253 232 aa12.15□□□□□ -0.46
MSR1-210ENST00000519060 RALBP1Q15311 655 aa12.15□□□□□ -0.46
MSR1-210ENST00000519060 RTL5Q5HYW3 569 aaPredicted RBP12.15□□□□□ -0.46
MSR1-210ENST00000519060 KRT26Q7Z3Y9 468 aa12.15□□□□□ -0.46
MSR1-210ENST00000519060 CCDC146Q8IYE0 955 aa12.15□□□□□ -0.46
MSR1-210ENST00000519060 CASP8AP2Q9UKL3 1982 aa12.14□□□□□ -0.47
MSR1-210ENST00000519060 RPS8P62241 208 aaKnown RBP12.14□□□□□ -0.47
MSR1-210ENST00000519060 TRIM28Q13263 835 aaKnown RBP12.14□□□□□ -0.47
MSR1-210ENST00000519060 DGKZQ13574 1117 aa12.14□□□□□ -0.47
MSR1-210ENST00000519060 HDGFL1Q5TGJ6 251 aa12.14□□□□□ -0.47
MSR1-210ENST00000519060 SYMPKQ92797 1274 aaKnown RBP12.14□□□□□ -0.47
MSR1-210ENST00000519060 TAF1P21675 1872 aa12.13□□□□□ -0.47
MSR1-210ENST00000519060 FAM155AB1AL88 458 aaPredicted RBP12.13□□□□□ -0.47
MSR1-210ENST00000519060 IRS4O14654 1257 aaPredicted RBP12.13□□□□□ -0.47
MSR1-210ENST00000519060 ECE2O60344 883 aa12.13□□□□□ -0.47
MSR1-210ENST00000519060 VIL1P09327 827 aaKnown RBP12.13□□□□□ -0.47
MSR1-210ENST00000519060 RPS12P25398 132 aaKnown RBP12.13□□□□□ -0.47
MSR1-210ENST00000519060 CSPP1Q1MSJ5 1256 aa12.13□□□□□ -0.47
MSR1-210ENST00000519060 RGMBQ6NW40 437 aa12.13□□□□□ -0.47
MSR1-210ENST00000519060 C2orf69Q8N8R5 385 aa12.13□□□□□ -0.47
MSR1-210ENST00000519060 PROCA1Q8NCQ7 364 aaPredicted RBP12.13□□□□□ -0.47
MSR1-210ENST00000519060 TBC1D16Q8TBP0 767 aa12.13□□□□□ -0.47
MSR1-210ENST00000519060 DCPSQ96C86 337 aaKnown RBP12.13□□□□□ -0.47
MSR1-210ENST00000519060 GBA2Q9HCG7 927 aaPredicted RBP12.13□□□□□ -0.47
MSR1-210ENST00000519060 DBF4Q9UBU7 674 aaPredicted RBP12.13□□□□□ -0.47
MSR1-210ENST00000519060 THSD7BQ9C0I4 1608 aa12.12□□□□□ -0.47
MSR1-210ENST00000519060 ADM5C9JUS6 153 aa12.12□□□□□ -0.47
MSR1-210ENST00000519060 KIF23Q02241 960 aaPredicted RBP12.12□□□□□ -0.47
MSR1-210ENST00000519060 PRPF38BQ5VTL8 546 aaKnown RBP12.12□□□□□ -0.47
MSR1-210ENST00000519060 DUSP27Q5VZP5 1158 aa12.12□□□□□ -0.47
MSR1-210ENST00000519060 RUNDC1Q96C34 613 aa12.12□□□□□ -0.47
MSR1-210ENST00000519060 EYA3Q99504 573 aa12.12□□□□□ -0.47
MSR1-210ENST00000519060 USB1Q9BQ65 265 aaKnown RBP12.12□□□□□ -0.47
MSR1-210ENST00000519060 ZC3H12CQ9C0D7 883 aaKnown RBP12.12□□□□□ -0.47
MSR1-210ENST00000519060 SEC31BQ9NQW1 1179 aa12.12□□□□□ -0.47
MSR1-210ENST00000519060 HYPKQ9NX55 129 aa12.12□□□□□ -0.47
MSR1-210ENST00000519060 RTL9Q8NET4 1388 aa12.12□□□□□ -0.47
MSR1-210ENST00000519060 POLR2AP24928 1970 aaKnown RBP12.11□□□□□ -0.47
MSR1-210ENST00000519060 ANKRD36CQ5JPF3 1778 aa12.11□□□□□ -0.47
MSR1-210ENST00000519060 HOXB7P09629 217 aa12.11□□□□□ -0.47
MSR1-210ENST00000519060 ZNF157P51786 506 aaPredicted RBP12.11□□□□□ -0.47
MSR1-210ENST00000519060 MTMR2Q13614 643 aa12.11□□□□□ -0.47
MSR1-210ENST00000519060 FAM160A2Q8N612 972 aaPredicted RBP12.11□□□□□ -0.47
MSR1-210ENST00000519060 PCMTD1Q96MG8 357 aaPredicted RBP12.11□□□□□ -0.47
MSR1-210ENST00000519060 ADAMTS8Q9UP79 889 aa12.11□□□□□ -0.47
MSR1-210ENST00000519060 ASTN2O75129 1339 aaPredicted RBP12.11□□□□□ -0.47
MSR1-210ENST00000519060 SPDYE5A6NIY4 337 aa12.1□□□□□ -0.47
MSR1-210ENST00000519060 TRPA1O75762 1119 aa12.1□□□□□ -0.47
MSR1-210ENST00000519060 RETREG3Q86VR2 466 aa12.1□□□□□ -0.47
MSR1-210ENST00000519060 ZBTB38Q8NAP3 1195 aaPredicted RBP12.1□□□□□ -0.47
MSR1-210ENST00000519060 JARID2Q92833 1246 aaPredicted RBP12.1□□□□□ -0.47
MSR1-210ENST00000519060 CSRNP1Q96S65 589 aa12.1□□□□□ -0.47
MSR1-210ENST00000519060 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.1□□□□□ -0.47
MSR1-210ENST00000519060 SLC6A16Q9GZN6 736 aa12.1□□□□□ -0.47
MSR1-210ENST00000519060 RNF186Q9NXI6 227 aa12.1□□□□□ -0.47
MSR1-210ENST00000519060 PODXL2Q9NZ53 605 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms