RNA–Protein interactions for RNA: ENST00000518840.5

R3HCC1-204, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene R3HCC1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-204ENST00000518840 IFNL1Q8IU54 200 aa23.4■■□□□ 1.34
R3HCC1-204ENST00000518840 TRMT2AQ8IZ69 625 aaKnown RBP23.4■■□□□ 1.34
R3HCC1-204ENST00000518840 UNCXA6NJT0 531 aa23.39■■□□□ 1.33
R3HCC1-204ENST00000518840 IGF2BP3O00425 579 aaKnown RBP eCLIP23.39■■□□□ 1.33
R3HCC1-204ENST00000518840 FGFR2P21802 821 aa23.39■■□□□ 1.33
R3HCC1-204ENST00000518840 IREB2P48200 963 aaKnown RBP23.39■■□□□ 1.33
R3HCC1-204ENST00000518840 CAVIN4Q5BKX8 364 aa23.39■■□□□ 1.33
R3HCC1-204ENST00000518840 SMC4Q9NTJ3 1288 aa23.39■■□□□ 1.33
R3HCC1-204ENST00000518840 ARAP2Q8WZ64 1704 aa23.39■■□□□ 1.33
R3HCC1-204ENST00000518840 TCP10L2B9ZVM9 353 aa23.38■■□□□ 1.33
R3HCC1-204ENST00000518840 FKTNO75072 461 aa23.38■■□□□ 1.33
R3HCC1-204ENST00000518840 INHBEP58166 350 aa23.38■■□□□ 1.33
R3HCC1-204ENST00000518840 TNFAIP1Q13829 316 aa23.38■■□□□ 1.33
R3HCC1-204ENST00000518840 PKN2Q16513 984 aaKnown RBP23.38■■□□□ 1.33
R3HCC1-204ENST00000518840 TMEM39BQ9GZU3 492 aa23.38■■□□□ 1.33
R3HCC1-204ENST00000518840 ALDH1A1P00352 501 aa23.37■■□□□ 1.33
R3HCC1-204ENST00000518840 ANKRD13AQ8IZ07 590 aa23.37■■□□□ 1.33
R3HCC1-204ENST00000518840 EYA2O00167 538 aa23.36■■□□□ 1.33
R3HCC1-204ENST00000518840 FRAT2O75474 233 aaPredicted RBP23.36■■□□□ 1.33
R3HCC1-204ENST00000518840 HDLBPQ00341 1268 aaKnown RBP23.36■■□□□ 1.33
R3HCC1-204ENST00000518840 PUM3Q15397 648 aaKnown RBP23.36■■□□□ 1.33
R3HCC1-204ENST00000518840 TBC1D22AQ8WUA7 517 aa23.36■■□□□ 1.33
R3HCC1-204ENST00000518840 CACNB3P54284 484 aa23.35■■□□□ 1.33
R3HCC1-204ENST00000518840 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.35■■□□□ 1.33
R3HCC1-204ENST00000518840 ATG9AQ7Z3C6 839 aa23.35■■□□□ 1.33
R3HCC1-204ENST00000518840 ELP3Q9H9T3 547 aa23.35■■□□□ 1.33
R3HCC1-204ENST00000518840 KIF16BQ96L93 1317 aa23.34■■□□□ 1.33
R3HCC1-204ENST00000518840 IFIT1P09914 478 aaKnown RBP23.34■■□□□ 1.33
R3HCC1-204ENST00000518840 CNKSR2Q8WXI2 1034 aa23.34■■□□□ 1.33
R3HCC1-204ENST00000518840 TEKT1Q969V4 418 aa23.34■■□□□ 1.33
R3HCC1-204ENST00000518840 PTPN18Q99952 460 aa23.34■■□□□ 1.33
R3HCC1-204ENST00000518840 APOBEC3HQ6NTF7 200 aaKnown RBP23.33■■□□□ 1.33
R3HCC1-204ENST00000518840 FBXO46Q6PJ61 603 aaPredicted RBP23.33■■□□□ 1.33
R3HCC1-204ENST00000518840 OPTNQ96CV9 577 aa23.33■■□□□ 1.33
R3HCC1-204ENST00000518840 ZDHHC15Q96MV8 337 aa23.33■■□□□ 1.33
R3HCC1-204ENST00000518840 NOB1Q9ULX3 412 aaKnown RBP23.33■■□□□ 1.33
R3HCC1-204ENST00000518840 TESPA1A2RU30 521 aaPredicted RBP23.32■■□□□ 1.32
R3HCC1-204ENST00000518840 TNNI2P48788 182 aa23.32■■□□□ 1.32
R3HCC1-204ENST00000518840 OTOFQ9HC10 1997 aa23.32■■□□□ 1.32
R3HCC1-204ENST00000518840 LAMB1P07942 1786 aa23.32■■□□□ 1.32
R3HCC1-204ENST00000518840 UBTFL1P0CB47 393 aaPredicted RBP23.31■■□□□ 1.32
R3HCC1-204ENST00000518840 VGLL4Q14135 290 aa23.31■■□□□ 1.32
R3HCC1-204ENST00000518840 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.31■■□□□ 1.32
R3HCC1-204ENST00000518840 LPIN2Q92539 896 aa23.31■■□□□ 1.32
R3HCC1-204ENST00000518840 MS4A4AQ96JQ5 239 aa23.31■■□□□ 1.32
R3HCC1-204ENST00000518840 MRIQ9BWK5 157 aa23.31■■□□□ 1.32
R3HCC1-204ENST00000518840 SLC5A1P13866 664 aa23.3■■□□□ 1.32
R3HCC1-204ENST00000518840 MAP3K9P80192 1104 aa23.3■■□□□ 1.32
R3HCC1-204ENST00000518840 CRHR2Q13324 411 aa23.3■■□□□ 1.32
R3HCC1-204ENST00000518840 SIL1Q9H173 461 aa23.3■■□□□ 1.32
R3HCC1-204ENST00000518840 SUGT1Q9Y2Z0 365 aa23.3■■□□□ 1.32
R3HCC1-204ENST00000518840 CT47B1P0C2W7 299 aaPredicted RBP23.29■■□□□ 1.32
R3HCC1-204ENST00000518840 HHIPL2Q6UWX4 724 aa23.28■■□□□ 1.32
R3HCC1-204ENST00000518840 OTOP1Q7RTM1 612 aa23.28■■□□□ 1.32
R3HCC1-204ENST00000518840 BRI3BPQ8WY22 251 aa23.28■■□□□ 1.32
R3HCC1-204ENST00000518840 TRIM17Q9Y577 477 aa23.28■■□□□ 1.32
R3HCC1-204ENST00000518840 LRRFIP2Q9Y608 721 aaKnown RBP23.28■■□□□ 1.32
R3HCC1-204ENST00000518840 CIAO1O76071 339 aa23.27■■□□□ 1.32
R3HCC1-204ENST00000518840 CAP1Q01518 475 aa23.27■■□□□ 1.32
R3HCC1-204ENST00000518840 FAM83AQ86UY5 434 aa23.27■■□□□ 1.32
R3HCC1-204ENST00000518840 MEIS3Q99687 375 aa23.27■■□□□ 1.32
R3HCC1-204ENST00000518840 API5Q9BZZ5 524 aaKnown RBP23.27■■□□□ 1.32
R3HCC1-204ENST00000518840 PA2G4Q9UQ80 394 aaKnown RBP23.27■■□□□ 1.32
R3HCC1-204ENST00000518840 MAST3O60307 1309 aa23.27■■□□□ 1.32
R3HCC1-204ENST00000518840 ATP2B3Q16720 1220 aa23.26■■□□□ 1.31
R3HCC1-204ENST00000518840 FKBP1CQ5VVH2 108 aa23.26■■□□□ 1.31
R3HCC1-204ENST00000518840 OTUD7BQ6GQQ9 843 aa23.26■■□□□ 1.31
R3HCC1-204ENST00000518840 WDR66Q8TBY9 1149 aa23.26■■□□□ 1.31
R3HCC1-204ENST00000518840 TMOD2Q9NZR1 351 aa23.26■■□□□ 1.31
R3HCC1-204ENST00000518840 FBXO3Q9UK99 471 aa23.26■■□□□ 1.31
R3HCC1-204ENST00000518840 RARSP54136 660 aaKnown RBP23.25■■□□□ 1.31
R3HCC1-204ENST00000518840 DIXDC1Q155Q3 683 aa23.25■■□□□ 1.31
R3HCC1-204ENST00000518840 CD99L2Q8TCZ2 262 aa23.25■■□□□ 1.31
R3HCC1-204ENST00000518840 OTUD5Q96G74 571 aa23.25■■□□□ 1.31
R3HCC1-204ENST00000518840 CEP126Q9P2H0 1117 aa23.25■■□□□ 1.31
R3HCC1-204ENST00000518840 CSADQ9Y600 493 aa23.25■■□□□ 1.31
R3HCC1-204ENST00000518840 SNCAIPQ9Y6H5 919 aa23.25■■□□□ 1.31
R3HCC1-204ENST00000518840 TNRC18O15417 2968 aaPredicted RBP23.24■■□□□ 1.31
R3HCC1-204ENST00000518840 CCER2I3L3R5 266 aa23.24■■□□□ 1.31
R3HCC1-204ENST00000518840 PRDX5P30044 214 aa23.24■■□□□ 1.31
R3HCC1-204ENST00000518840 DAGLAQ9Y4D2 1042 aa23.24■■□□□ 1.31
R3HCC1-204ENST00000518840 CCL15-CCL14A0A0B4J2E2 113 aa23.23■■□□□ 1.31
R3HCC1-204ENST00000518840 SPDYE5A6NIY4 337 aa23.23■■□□□ 1.31
R3HCC1-204ENST00000518840 PHKA1P46020 1223 aa23.23■■□□□ 1.31
R3HCC1-204ENST00000518840 CCL15Q16663 113 aa23.23■■□□□ 1.31
R3HCC1-204ENST00000518840 ZKSCAN4Q969J2 545 aaPredicted RBP23.23■■□□□ 1.31
R3HCC1-204ENST00000518840 ERO1AQ96HE7 468 aa23.23■■□□□ 1.31
R3HCC1-204ENST00000518840 WRNIP1Q96S55 665 aa23.23■■□□□ 1.31
R3HCC1-204ENST00000518840 ADORA1P30542 326 aa23.22■■□□□ 1.31
R3HCC1-204ENST00000518840 IL15P40933 162 aaPredicted RBP23.22■■□□□ 1.31
R3HCC1-204ENST00000518840 GTF2A2P52657 109 aa23.22■■□□□ 1.31
R3HCC1-204ENST00000518840 CDC42EP5Q6NZY7 148 aa23.22■■□□□ 1.31
R3HCC1-204ENST00000518840 FAM43AQ8N2R8 423 aa23.22■■□□□ 1.31
R3HCC1-204ENST00000518840 COPRSQ9NQ92 184 aa23.22■■□□□ 1.31
R3HCC1-204ENST00000518840 RPAP1Q9BWH6 1393 aaPredicted RBP23.22■■□□□ 1.31
R3HCC1-204ENST00000518840 SP3Q02447 781 aa23.21■■□□□ 1.31
R3HCC1-204ENST00000518840 NFIAQ12857 509 aa23.21■■□□□ 1.31
R3HCC1-204ENST00000518840 MIGA2Q7L4E1 593 aa23.21■■□□□ 1.31
R3HCC1-204ENST00000518840 SLC34A2O95436 690 aa23.2■■□□□ 1.3
R3HCC1-204ENST00000518840 INTS3Q68E01 1043 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms