RNA–Protein interactions for RNA: ENST00000518794.6

ARFGAP1-209, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 1 (best)

Gene ARFGAP1, Length 2,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-209ENST00000518794 TJP1Q07157 1748 aa21.05■□□□□ 0.96
ARFGAP1-209ENST00000518794 NPHP1O15259 732 aa21.05■□□□□ 0.96
ARFGAP1-209ENST00000518794 WDHD1O75717 1129 aaPredicted RBP21.05■□□□□ 0.96
ARFGAP1-209ENST00000518794 PTPN14Q15678 1187 aa21.05■□□□□ 0.96
ARFGAP1-209ENST00000518794 PHKBQ93100 1093 aa21.05■□□□□ 0.96
ARFGAP1-209ENST00000518794 MROH7-TTC4A0A0A0MT08 1334 aa21.04■□□□□ 0.96
ARFGAP1-209ENST00000518794 ZNF213O14771 459 aa21.04■□□□□ 0.96
ARFGAP1-209ENST00000518794 ZRSR1Q15695 479 aaKnown RBP21.04■□□□□ 0.96
ARFGAP1-209ENST00000518794 CERS3Q8IU89 383 aa21.04■□□□□ 0.96
ARFGAP1-209ENST00000518794 CTNNA3Q9UI47 895 aa21.04■□□□□ 0.96
ARFGAP1-209ENST00000518794 NWD2Q9ULI1 1742 aa21.04■□□□□ 0.96
ARFGAP1-209ENST00000518794 ZNF202O95125 648 aa21.04■□□□□ 0.96
ARFGAP1-209ENST00000518794 APPP05067 770 aa21.04■□□□□ 0.96
ARFGAP1-209ENST00000518794 MCAMP43121 646 aa21.04■□□□□ 0.96
ARFGAP1-209ENST00000518794 RBM6P78332 1123 aaKnown RBP21.04■□□□□ 0.96
ARFGAP1-209ENST00000518794 TMC6Q7Z403 805 aa21.04■□□□□ 0.96
ARFGAP1-209ENST00000518794 MYL10Q9BUA6 226 aa21.04■□□□□ 0.96
ARFGAP1-209ENST00000518794 ZNF215Q9UL58 517 aaPredicted RBP21.04■□□□□ 0.96
ARFGAP1-209ENST00000518794 KIF1AQ12756 1690 aa21.03■□□□□ 0.96
ARFGAP1-209ENST00000518794 TBC1D10CQ8IV04 446 aa21.03■□□□□ 0.96
ARFGAP1-209ENST00000518794 NCOA7Q8NI08 942 aa21.03■□□□□ 0.96
ARFGAP1-209ENST00000518794 APPBP2Q92624 585 aa21.03■□□□□ 0.96
ARFGAP1-209ENST00000518794 PCDH11XQ9BZA7 1347 aa21.03■□□□□ 0.96
ARFGAP1-209ENST00000518794 PCDH11YQ9BZA8 1340 aa21.03■□□□□ 0.96
ARFGAP1-209ENST00000518794 PFKFB1P16118 471 aa21.03■□□□□ 0.96
ARFGAP1-209ENST00000518794 LMOD1P29536 600 aaPredicted RBP21.03■□□□□ 0.96
ARFGAP1-209ENST00000518794 KIF23Q02241 960 aaPredicted RBP21.03■□□□□ 0.96
ARFGAP1-209ENST00000518794 GABPB1Q06547 395 aaPredicted RBP21.03■□□□□ 0.96
ARFGAP1-209ENST00000518794 ATL3Q6DD88 541 aa21.03■□□□□ 0.96
ARFGAP1-209ENST00000518794 SYNE3Q6ZMZ3 975 aa21.03■□□□□ 0.96
ARFGAP1-209ENST00000518794 CYB5R4Q7L1T6 521 aa21.03■□□□□ 0.96
ARFGAP1-209ENST00000518794 ISCA1Q9BUE6 129 aa21.03■□□□□ 0.96
ARFGAP1-209ENST00000518794 SLC3A2P08195 630 aaKnown RBP21.02■□□□□ 0.96
ARFGAP1-209ENST00000518794 EVCP57679 992 aa21.02■□□□□ 0.96
ARFGAP1-209ENST00000518794 TCIRG1Q13488 830 aa21.02■□□□□ 0.96
ARFGAP1-209ENST00000518794 METTL24Q5JXM2 366 aa21.02■□□□□ 0.96
ARFGAP1-209ENST00000518794 NAT10Q9H0A0 1025 aaKnown RBP21.02■□□□□ 0.96
ARFGAP1-209ENST00000518794 PAXBP1Q9Y5B6 917 aa21.02■□□□□ 0.96
ARFGAP1-209ENST00000518794 IDH1O75874 414 aaKnown RBP21.02■□□□□ 0.96
ARFGAP1-209ENST00000518794 IFIT5Q13325 482 aaKnown RBP21.02■□□□□ 0.96
ARFGAP1-209ENST00000518794 ANO1Q5XXA6 986 aa21.02■□□□□ 0.96
ARFGAP1-209ENST00000518794 NYAP1Q6ZVC0 841 aa21.02■□□□□ 0.96
ARFGAP1-209ENST00000518794 DNAJC10Q8IXB1 793 aa21.02■□□□□ 0.96
ARFGAP1-209ENST00000518794 CCAR2Q8N163 923 aaKnown RBP21.02■□□□□ 0.96
ARFGAP1-209ENST00000518794 SPATA31A3Q5VYP0 1347 aa21.02■□□□□ 0.96
ARFGAP1-209ENST00000518794 TNS3Q68CZ2 1445 aa21.02■□□□□ 0.95
ARFGAP1-209ENST00000518794 ATP1A3P13637 1013 aa21.01■□□□□ 0.95
ARFGAP1-209ENST00000518794 AXDND1Q5T1B0 1012 aaPredicted RBP21.01■□□□□ 0.95
ARFGAP1-209ENST00000518794 MICU3Q86XE3 530 aa21.01■□□□□ 0.95
ARFGAP1-209ENST00000518794 KCNG4Q8TDN1 519 aa21.01■□□□□ 0.95
ARFGAP1-209ENST00000518794 GREM2Q9H772 168 aa21.01■□□□□ 0.95
ARFGAP1-209ENST00000518794 A0A1W2PQ27 194 aa21.01■□□□□ 0.95
ARFGAP1-209ENST00000518794 A0A1W2PQ64 194 aa21.01■□□□□ 0.95
ARFGAP1-209ENST00000518794 A0A1W2PQD8 194 aa21.01■□□□□ 0.95
ARFGAP1-209ENST00000518794 SLC9C2Q5TAH2 1124 aa21.01■□□□□ 0.95
ARFGAP1-209ENST00000518794 ARMCX5Q6P1M9 558 aa21.01■□□□□ 0.95
ARFGAP1-209ENST00000518794 CLIC6Q96NY7 704 aa21.01■□□□□ 0.95
ARFGAP1-209ENST00000518794 POLR3EQ9NVU0 708 aa21.01■□□□□ 0.95
ARFGAP1-209ENST00000518794 ASAP1Q9ULH1 1129 aa21.01■□□□□ 0.95
ARFGAP1-209ENST00000518794 HLFQ16534 295 aa21■□□□□ 0.95
ARFGAP1-209ENST00000518794 STK11IPQ8N1F8 1099 aa21■□□□□ 0.95
ARFGAP1-209ENST00000518794 B4E1Z4 1266 aa21■□□□□ 0.95
ARFGAP1-209ENST00000518794 ABCC6O95255 1503 aa21■□□□□ 0.95
ARFGAP1-209ENST00000518794 CDC27P30260 824 aa21■□□□□ 0.95
ARFGAP1-209ENST00000518794 GOLGA8FQ08AF8 430 aa21■□□□□ 0.95
ARFGAP1-209ENST00000518794 GOLGA8DPQ0D2H9 430 aa21■□□□□ 0.95
ARFGAP1-209ENST00000518794 PIH1D3Q9NQM4 214 aaKnown RBP21■□□□□ 0.95
ARFGAP1-209ENST00000518794 AKAP2Q9Y2D5 859 aa21■□□□□ 0.95
ARFGAP1-209ENST00000518794 ADAMTSL3P82987 1691 aa21■□□□□ 0.95
ARFGAP1-209ENST00000518794 SNAP23O00161 211 aa20.99■□□□□ 0.95
ARFGAP1-209ENST00000518794 LDHAL6AQ6ZMR3 332 aa20.99■□□□□ 0.95
ARFGAP1-209ENST00000518794 HELBQ8NG08 1087 aaPredicted RBP20.99■□□□□ 0.95
ARFGAP1-209ENST00000518794 ALG1Q9BT22 464 aa20.99■□□□□ 0.95
ARFGAP1-209ENST00000518794 KCPQ6ZWJ8 1503 aa20.99■□□□□ 0.95
ARFGAP1-209ENST00000518794 ERVV-2B6SEH9 535 aa20.99■□□□□ 0.95
ARFGAP1-209ENST00000518794 HSP90AA4PQ58FG1 418 aa20.99■□□□□ 0.95
ARFGAP1-209ENST00000518794 TIGD1Q96MW7 591 aa20.99■□□□□ 0.95
ARFGAP1-209ENST00000518794 ATG3Q9NT62 314 aa20.99■□□□□ 0.95
ARFGAP1-209ENST00000518794 PKD1L3Q7Z443 1732 aa20.99■□□□□ 0.95
ARFGAP1-209ENST00000518794 LAMB4A4D0S4 1761 aa20.99■□□□□ 0.95
ARFGAP1-209ENST00000518794 NUP188Q5SRE5 1749 aa20.99■□□□□ 0.95
ARFGAP1-209ENST00000518794 DHX16O60231 1041 aaKnown RBP20.98■□□□□ 0.95
ARFGAP1-209ENST00000518794 YEATS4O95619 227 aa20.98■□□□□ 0.95
ARFGAP1-209ENST00000518794 CAPN2P17655 700 aa20.98■□□□□ 0.95
ARFGAP1-209ENST00000518794 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.98■□□□□ 0.95
ARFGAP1-209ENST00000518794 WDR17Q8IZU2 1322 aa20.98■□□□□ 0.95
ARFGAP1-209ENST00000518794 ZFYP08048 801 aaPredicted RBP20.98■□□□□ 0.95
ARFGAP1-209ENST00000518794 ITGA6P23229 1130 aa20.98■□□□□ 0.95
ARFGAP1-209ENST00000518794 NCAPHQ15003 741 aa20.98■□□□□ 0.95
ARFGAP1-209ENST00000518794 SPECC1Q5M775 1068 aa20.98■□□□□ 0.95
ARFGAP1-209ENST00000518794 E4F1Q66K89 784 aaPredicted RBP20.98■□□□□ 0.95
ARFGAP1-209ENST00000518794 LRRN4CLQ8ND94 238 aa20.98■□□□□ 0.95
ARFGAP1-209ENST00000518794 CCDC66A2RUB6 948 aa20.98■□□□□ 0.95
ARFGAP1-209ENST00000518794 NEMFO60524 1076 aa20.98■□□□□ 0.95
ARFGAP1-209ENST00000518794 PNOCQ13519 176 aa20.98■□□□□ 0.95
ARFGAP1-209ENST00000518794 VPS37DQ86XT2 251 aa20.98■□□□□ 0.95
ARFGAP1-209ENST00000518794 ERICH4A6NGS2 130 aa20.97■□□□□ 0.95
ARFGAP1-209ENST00000518794 METAP2P50579 478 aaKnown RBP eCLIP20.97■□□□□ 0.95
ARFGAP1-209ENST00000518794 ELF2Q15723 593 aa20.97■□□□□ 0.95
ARFGAP1-209ENST00000518794 FBXL16Q8N461 479 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms