RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 LDHAL6AQ6ZMR3 332 aa15.71■□□□□ 0.11
TRAPPC9-204ENST00000518723 CDAN1Q8IWY9 1227 aa15.71■□□□□ 0.11
TRAPPC9-204ENST00000518723 DZIP1LQ8IYY4 767 aaKnown RBP15.71■□□□□ 0.11
TRAPPC9-204ENST00000518723 TTF2Q9UNY4 1162 aaKnown RBP15.71■□□□□ 0.11
TRAPPC9-204ENST00000518723 CSADQ9Y600 493 aa15.71■□□□□ 0.11
TRAPPC9-204ENST00000518723 IL16Q14005 1332 aa15.7■□□□□ 0.1
TRAPPC9-204ENST00000518723 SPDYE5A6NIY4 337 aa15.7■□□□□ 0.1
TRAPPC9-204ENST00000518723 TLR2O60603 784 aa15.7■□□□□ 0.1
TRAPPC9-204ENST00000518723 WDHD1O75717 1129 aaPredicted RBP15.7■□□□□ 0.1
TRAPPC9-204ENST00000518723 GNRH1P01148 92 aa15.7■□□□□ 0.1
TRAPPC9-204ENST00000518723 TNNI2P48788 182 aa15.7■□□□□ 0.1
TRAPPC9-204ENST00000518723 LMBR1LQ6UX01 489 aa15.7■□□□□ 0.1
TRAPPC9-204ENST00000518723 OTUD5Q96G74 571 aa15.7■□□□□ 0.1
TRAPPC9-204ENST00000518723 TMEM39BQ9GZU3 492 aa15.7■□□□□ 0.1
TRAPPC9-204ENST00000518723 CHMP3Q9Y3E7 222 aa15.7■□□□□ 0.1
TRAPPC9-204ENST00000518723 TCP10L2B9ZVM9 353 aa15.69■□□□□ 0.1
TRAPPC9-204ENST00000518723 H0YGN5 161 aa15.69■□□□□ 0.1
TRAPPC9-204ENST00000518723 CRKP46108 304 aa15.69■□□□□ 0.1
TRAPPC9-204ENST00000518723 PRMT2P55345 433 aa15.69■□□□□ 0.1
TRAPPC9-204ENST00000518723 LACTBP83111 547 aaPredicted RBP15.69■□□□□ 0.1
TRAPPC9-204ENST00000518723 UBE4AQ14139 1066 aa15.69■□□□□ 0.1
TRAPPC9-204ENST00000518723 CCDC57Q2TAC2 916 aa15.69■□□□□ 0.1
TRAPPC9-204ENST00000518723 WWC1Q8IX03 1113 aa15.69■□□□□ 0.1
TRAPPC9-204ENST00000518723 CNNM1Q9NRU3 951 aa15.69■□□□□ 0.1
TRAPPC9-204ENST00000518723 PLIN1O60240 522 aa15.68■□□□□ 0.1
TRAPPC9-204ENST00000518723 CETPP11597 493 aa15.68■□□□□ 0.1
TRAPPC9-204ENST00000518723 HIBADHP31937 336 aaKnown RBP15.68■□□□□ 0.1
TRAPPC9-204ENST00000518723 KIF22Q14807 665 aa15.68■□□□□ 0.1
TRAPPC9-204ENST00000518723 TAF7LQ5H9L4 462 aa15.68■□□□□ 0.1
TRAPPC9-204ENST00000518723 EPHA10Q5JZY3 1008 aa15.68■□□□□ 0.1
TRAPPC9-204ENST00000518723 BEND3Q5T5X7 828 aa15.68■□□□□ 0.1
TRAPPC9-204ENST00000518723 SH3TC2Q8TF17 1288 aa15.68■□□□□ 0.1
TRAPPC9-204ENST00000518723 ZNF594Q96JF6 807 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC9-204ENST00000518723 HDLBPQ00341 1268 aaKnown RBP15.67■□□□□ 0.1
TRAPPC9-204ENST00000518723 NCBP3Q53F19 620 aaKnown RBP15.67■□□□□ 0.1
TRAPPC9-204ENST00000518723 ERO1BQ86YB8 467 aa15.67■□□□□ 0.1
TRAPPC9-204ENST00000518723 FAM84BQ96KN1 310 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC9-204ENST00000518723 ARHGAP39Q9C0H5 1083 aa15.67■□□□□ 0.1
TRAPPC9-204ENST00000518723 SNCAIPQ9Y6H5 919 aa15.67■□□□□ 0.1
TRAPPC9-204ENST00000518723 ARAP2Q8WZ64 1704 aa15.67■□□□□ 0.1
TRAPPC9-204ENST00000518723 BTBD19C9JJ37 291 aa15.66■□□□□ 0.1
TRAPPC9-204ENST00000518723 GYG1P46976 350 aa15.66■□□□□ 0.1
TRAPPC9-204ENST00000518723 SNAPC2Q13487 334 aa15.66■□□□□ 0.1
TRAPPC9-204ENST00000518723 GRM8O00222 908 aa15.65■□□□□ 0.1
TRAPPC9-204ENST00000518723 VAMP4O75379 141 aa15.65■□□□□ 0.1
TRAPPC9-204ENST00000518723 MYCP01106 439 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC9-204ENST00000518723 PPIL2Q13356 520 aa15.65■□□□□ 0.1
TRAPPC9-204ENST00000518723 HOOK2Q96ED9 719 aa15.65■□□□□ 0.1
TRAPPC9-204ENST00000518723 FANCIQ9NVI1 1328 aa15.65■□□□□ 0.1
TRAPPC9-204ENST00000518723 F6X3S4 739 aa15.64■□□□□ 0.09
TRAPPC9-204ENST00000518723 IRF6O14896 467 aa15.64■□□□□ 0.09
TRAPPC9-204ENST00000518723 FKBP1CQ5VVH2 108 aa15.64■□□□□ 0.09
TRAPPC9-204ENST00000518723 C17orf99Q6UX52 265 aa15.64■□□□□ 0.09
TRAPPC9-204ENST00000518723 CHRDL2Q6WN34 429 aa15.64■□□□□ 0.09
TRAPPC9-204ENST00000518723 FAM83AQ86UY5 434 aa15.64■□□□□ 0.09
TRAPPC9-204ENST00000518723 TBC1D22AQ8WUA7 517 aa15.64■□□□□ 0.09
TRAPPC9-204ENST00000518723 SHISA4Q96DD7 197 aa15.64■□□□□ 0.09
TRAPPC9-204ENST00000518723 WRNIP1Q96S55 665 aa15.64■□□□□ 0.09
TRAPPC9-204ENST00000518723 MRIQ9BWK5 157 aa15.64■□□□□ 0.09
TRAPPC9-204ENST00000518723 CACNA1FO60840 1977 aa15.64■□□□□ 0.09
TRAPPC9-204ENST00000518723 GRIK5Q16478 980 aa15.63■□□□□ 0.09
TRAPPC9-204ENST00000518723 FBXO33Q7Z6M2 555 aa15.63■□□□□ 0.09
TRAPPC9-204ENST00000518723 UBE2Q1Q7Z7E8 422 aa15.63■□□□□ 0.09
TRAPPC9-204ENST00000518723 NKX2-3Q8TAU0 364 aa15.63■□□□□ 0.09
TRAPPC9-204ENST00000518723 ZKSCAN4Q969J2 545 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC9-204ENST00000518723 TEKT1Q969V4 418 aa15.63■□□□□ 0.09
TRAPPC9-204ENST00000518723 ZDHHC15Q96MV8 337 aa15.63■□□□□ 0.09
TRAPPC9-204ENST00000518723 SRRDQ9UH36 339 aa15.63■□□□□ 0.09
TRAPPC9-204ENST00000518723 RPAP1Q9BWH6 1393 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC9-204ENST00000518723 CACNB3P54284 484 aa15.62■□□□□ 0.09
TRAPPC9-204ENST00000518723 PPATQ06203 517 aa15.62■□□□□ 0.09
TRAPPC9-204ENST00000518723 MTFR1Q15390 333 aa15.62■□□□□ 0.09
TRAPPC9-204ENST00000518723 TMOD2Q9NZR1 351 aa15.62■□□□□ 0.09
TRAPPC9-204ENST00000518723 RBM27Q9P2N5 1060 aaKnown RBP15.62■□□□□ 0.09
TRAPPC9-204ENST00000518723 RIPOR2Q9Y4F9 1068 aa15.62■□□□□ 0.09
TRAPPC9-204ENST00000518723 MROH5Q6ZUA9 1318 aa15.62■□□□□ 0.09
TRAPPC9-204ENST00000518723 HOXD10P28358 340 aa15.61■□□□□ 0.09
TRAPPC9-204ENST00000518723 CTGFP29279 349 aa15.61■□□□□ 0.09
TRAPPC9-204ENST00000518723 DCAF15Q66K64 600 aa15.61■□□□□ 0.09
TRAPPC9-204ENST00000518723 ANKRD23Q86SG2 305 aa15.61■□□□□ 0.09
TRAPPC9-204ENST00000518723 VPS37DQ86XT2 251 aa15.61■□□□□ 0.09
TRAPPC9-204ENST00000518723 TRIM47Q96LD4 638 aa15.61■□□□□ 0.09
TRAPPC9-204ENST00000518723 PUS3Q9BZE2 481 aaKnown RBP15.61■□□□□ 0.09
TRAPPC9-204ENST00000518723 PRO3102Q9H379 93 aa15.61■□□□□ 0.09
TRAPPC9-204ENST00000518723 C9orf78Q9NZ63 289 aaPredicted RBP15.61■□□□□ 0.09
TRAPPC9-204ENST00000518723 SUGT1Q9Y2Z0 365 aa15.61■□□□□ 0.09
TRAPPC9-204ENST00000518723 ADGRA2Q96PE1 1338 aa15.61■□□□□ 0.09
TRAPPC9-204ENST00000518723 ZSWIM8A7E2V4 1837 aa15.61■□□□□ 0.09
TRAPPC9-204ENST00000518723 ALDH1L1O75891 902 aa15.6■□□□□ 0.09
TRAPPC9-204ENST00000518723 GJB1P08034 283 aa15.6■□□□□ 0.09
TRAPPC9-204ENST00000518723 GRK4P32298 578 aa15.6■□□□□ 0.09
TRAPPC9-204ENST00000518723 PSMC4P43686 418 aa15.6■□□□□ 0.09
TRAPPC9-204ENST00000518723 GJA8P48165 433 aa15.6■□□□□ 0.09
TRAPPC9-204ENST00000518723 APOBEC3HQ6NTF7 200 aaKnown RBP15.6■□□□□ 0.09
TRAPPC9-204ENST00000518723 DPF3Q92784 378 aa15.6■□□□□ 0.09
TRAPPC9-204ENST00000518723 ZNF341Q9BYN7 854 aa15.6■□□□□ 0.09
TRAPPC9-204ENST00000518723 MAST3O60307 1309 aa15.6■□□□□ 0.09
TRAPPC9-204ENST00000518723 OSBPP22059 807 aa15.59■□□□□ 0.09
TRAPPC9-204ENST00000518723 EXOSC9Q06265 439 aaKnown RBP15.59■□□□□ 0.09
TRAPPC9-204ENST00000518723 CHAF1AQ13111 956 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms