RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 AIDAQ96BJ3 306 aa9.1□□□□□ -0.95
CCDC6-203ENST00000518638 NIFKQ9BYG3 293 aaKnown RBP9.1□□□□□ -0.95
CCDC6-203ENST00000518638 STK26Q9P289 416 aa9.1□□□□□ -0.95
CCDC6-203ENST00000518638 YTHDC2Q9H6S0 1430 aaKnown RBP9.1□□□□□ -0.95
CCDC6-203ENST00000518638 PIK3C2GO75747 1445 aa9.09□□□□□ -0.95
CCDC6-203ENST00000518638 LOC105371045A0A1W2PR82 267 aa9.09□□□□□ -0.95
CCDC6-203ENST00000518638 A6NJY4 79 aa9.09□□□□□ -0.95
CCDC6-203ENST00000518638 SFI1A8K8P3 1242 aa9.09□□□□□ -0.95
CCDC6-203ENST00000518638 H2AFB1P0C5Y9 115 aa9.09□□□□□ -0.95
CCDC6-203ENST00000518638 H2AFB2P0C5Z0 115 aa9.09□□□□□ -0.95
CCDC6-203ENST00000518638 EPHA4P54764 986 aa9.09□□□□□ -0.95
CCDC6-203ENST00000518638 SEC13P55735 322 aa9.09□□□□□ -0.95
CCDC6-203ENST00000518638 DPYDQ12882 1025 aa9.09□□□□□ -0.95
CCDC6-203ENST00000518638 PDE3BQ13370 1112 aa9.09□□□□□ -0.95
CCDC6-203ENST00000518638 ARID3AQ99856 593 aa9.09□□□□□ -0.95
CCDC6-203ENST00000518638 PRDM11Q9NQV5 511 aa9.09□□□□□ -0.95
CCDC6-203ENST00000518638 CAMTA1Q9Y6Y1 1673 aa9.09□□□□□ -0.95
CCDC6-203ENST00000518638 PLEKHH1Q9ULM0 1364 aa9.09□□□□□ -0.95
CCDC6-203ENST00000518638 CRYBG1Q9Y4K1 1723 aa9.08□□□□□ -0.96
CCDC6-203ENST00000518638 SPATA31A1Q5TZJ5 1347 aa9.08□□□□□ -0.96
CCDC6-203ENST00000518638 FAM229AH3BQW9 127 aa9.08□□□□□ -0.96
CCDC6-203ENST00000518638 TRIM28Q13263 835 aaKnown RBP9.08□□□□□ -0.96
CCDC6-203ENST00000518638 NBPF1Q3BBV0 1214 aa9.08□□□□□ -0.96
CCDC6-203ENST00000518638 PODXL2Q9NZ53 605 aa9.08□□□□□ -0.96
CCDC6-203ENST00000518638 NOVA2Q9UNW9 492 aaKnown RBP9.08□□□□□ -0.96
CCDC6-203ENST00000518638 NRKQ7Z2Y5 1582 aa9.07□□□□□ -0.96
CCDC6-203ENST00000518638 ITGAEP38570 1179 aa9.07□□□□□ -0.96
CCDC6-203ENST00000518638 MARK1Q9P0L2 795 aa9.07□□□□□ -0.96
CCDC6-203ENST00000518638 ZMIZ1Q9ULJ6 1067 aa9.07□□□□□ -0.96
CCDC6-203ENST00000518638 IQSEC3Q9UPP2 1182 aaPredicted RBP9.07□□□□□ -0.96
CCDC6-203ENST00000518638 GJA3Q9Y6H8 435 aa9.07□□□□□ -0.96
CCDC6-203ENST00000518638 CASZ1Q86V15 1759 aa9.07□□□□□ -0.96
CCDC6-203ENST00000518638 DLC1Q96QB1 1528 aa9.06□□□□□ -0.96
CCDC6-203ENST00000518638 CDK2AP1O14519 115 aa9.06□□□□□ -0.96
CCDC6-203ENST00000518638 HYAL3O43820 417 aaPredicted RBP9.06□□□□□ -0.96
CCDC6-203ENST00000518638 TATP17735 454 aaPredicted RBP9.06□□□□□ -0.96
CCDC6-203ENST00000518638 TSEN2Q8NCE0 465 aaKnown RBP9.06□□□□□ -0.96
CCDC6-203ENST00000518638 SCHIP1Q9P0W5 487 aaPredicted RBP9.06□□□□□ -0.96
CCDC6-203ENST00000518638 DHX57Q6P158 1386 aaKnown RBP9.06□□□□□ -0.96
CCDC6-203ENST00000518638 ADGRF5Q8IZF2 1346 aa9.05□□□□□ -0.96
CCDC6-203ENST00000518638 ATP7BP35670 1465 aa9.05□□□□□ -0.96
CCDC6-203ENST00000518638 M0R082 166 aa9.05□□□□□ -0.96
CCDC6-203ENST00000518638 LAMC2Q13753 1193 aa9.05□□□□□ -0.96
CCDC6-203ENST00000518638 SAMD5Q5TGI4 173 aa9.05□□□□□ -0.96
CCDC6-203ENST00000518638 TNS4Q8IZW8 715 aa9.05□□□□□ -0.96
CCDC6-203ENST00000518638 ZNF295-AS1Q8N0V1 137 aa9.05□□□□□ -0.96
CCDC6-203ENST00000518638 ZNF417Q8TAU3 575 aa9.05□□□□□ -0.96
CCDC6-203ENST00000518638 FAM200AQ8TCP9 573 aa9.05□□□□□ -0.96
CCDC6-203ENST00000518638 ZNF587Q96SQ5 575 aaPredicted RBP9.05□□□□□ -0.96
CCDC6-203ENST00000518638 MDFIQ99750 246 aa9.05□□□□□ -0.96
CCDC6-203ENST00000518638 PRDM6Q9NQX0 595 aa9.05□□□□□ -0.96
CCDC6-203ENST00000518638 ZDHHC3Q9NYG2 299 aa9.05□□□□□ -0.96
CCDC6-203ENST00000518638 THRAP3Q9Y2W1 955 aaKnown RBP9.05□□□□□ -0.96
CCDC6-203ENST00000518638 USP3Q9Y6I4 520 aa9.05□□□□□ -0.96
CCDC6-203ENST00000518638 ITSN1Q15811 1721 aa9.05□□□□□ -0.96
CCDC6-203ENST00000518638 PARP4Q9UKK3 1724 aaKnown RBP9.05□□□□□ -0.96
CCDC6-203ENST00000518638 PHRF1Q9P1Y6 1649 aaKnown RBP9.05□□□□□ -0.96
CCDC6-203ENST00000518638 TULP4Q9NRJ4 1543 aa9.05□□□□□ -0.96
CCDC6-203ENST00000518638 OVOS2A0A0G2JMS6 1433 aa9.05□□□□□ -0.96
CCDC6-203ENST00000518638 OVOS2A0A0J9YW53 1432 aa9.05□□□□□ -0.96
CCDC6-203ENST00000518638 OVOS2Q6IE36 1432 aa9.05□□□□□ -0.96
CCDC6-203ENST00000518638 ACIN1Q9UKV3 1341 aaKnown RBP9.05□□□□□ -0.96
CCDC6-203ENST00000518638 PLSCR1O15162 318 aa9.04□□□□□ -0.96
CCDC6-203ENST00000518638 TMEM132EQ6IEE7 984 aa9.04□□□□□ -0.96
CCDC6-203ENST00000518638 SYT9Q86SS6 491 aa9.04□□□□□ -0.96
CCDC6-203ENST00000518638 PMFBP1Q8TBY8 1022 aa9.04□□□□□ -0.96
CCDC6-203ENST00000518638 SSH2Q76I76 1423 aa9.04□□□□□ -0.96
CCDC6-203ENST00000518638 MYOM1P52179 1685 aa9.04□□□□□ -0.96
CCDC6-203ENST00000518638 KIAA0232Q92628 1395 aa9.03□□□□□ -0.96
CCDC6-203ENST00000518638 EFSO43281 561 aa9.03□□□□□ -0.96
CCDC6-203ENST00000518638 EVA1CP58658 441 aa9.03□□□□□ -0.96
CCDC6-203ENST00000518638 COL9A3Q14050 684 aaPredicted RBP9.03□□□□□ -0.96
CCDC6-203ENST00000518638 GRIK4Q16099 956 aa9.03□□□□□ -0.96
CCDC6-203ENST00000518638 SLC9A9Q8IVB4 645 aa9.03□□□□□ -0.96
CCDC6-203ENST00000518638 TCP11L2Q8N4U5 519 aa9.03□□□□□ -0.96
CCDC6-203ENST00000518638 STK32AQ8WU08 396 aa9.03□□□□□ -0.96
CCDC6-203ENST00000518638 ZIC5Q96T25 663 aa9.03□□□□□ -0.96
CCDC6-203ENST00000518638 STRN4Q9NRL3 753 aa9.03□□□□□ -0.96
CCDC6-203ENST00000518638 SPATA31E1Q6ZUB1 1445 aa9.03□□□□□ -0.96
CCDC6-203ENST00000518638 ADARB2-AS1A8MUL3 147 aa9.02□□□□□ -0.97
CCDC6-203ENST00000518638 C9orf172C9J069 976 aa9.02□□□□□ -0.97
CCDC6-203ENST00000518638 SIN3BO75182 1162 aa9.02□□□□□ -0.97
CCDC6-203ENST00000518638 NGDNQ8NEJ9 315 aaKnown RBP9.02□□□□□ -0.97
CCDC6-203ENST00000518638 POGKQ9P215 609 aa9.02□□□□□ -0.97
CCDC6-203ENST00000518638 SWI5Q1ZZU3 235 aa9.01□□□□□ -0.97
CCDC6-203ENST00000518638 PRAM1Q96QH2 718 aa9.01□□□□□ -0.97
CCDC6-203ENST00000518638 TSPAN10Q9H1Z9 355 aaPredicted RBP9.01□□□□□ -0.97
CCDC6-203ENST00000518638 C14orf93Q9H972 538 aaKnown RBP9.01□□□□□ -0.97
CCDC6-203ENST00000518638 USP35Q9P2H5 1018 aa9.01□□□□□ -0.97
CCDC6-203ENST00000518638 MAP3K5Q99683 1374 aa9□□□□□ -0.97
CCDC6-203ENST00000518638 ALBP02768 609 aa9□□□□□ -0.97
CCDC6-203ENST00000518638 ADGRE1Q14246 886 aa9□□□□□ -0.97
CCDC6-203ENST00000518638 MBTPS1Q14703 1052 aa9□□□□□ -0.97
CCDC6-203ENST00000518638 RGL3Q3MIN7 710 aa9□□□□□ -0.97
CCDC6-203ENST00000518638 TMEM164Q5U3C3 297 aa9□□□□□ -0.97
CCDC6-203ENST00000518638 HINFPQ9BQA5 517 aa9□□□□□ -0.97
CCDC6-203ENST00000518638 SYT17Q9BSW7 474 aa9□□□□□ -0.97
CCDC6-203ENST00000518638 MTFR1LQ9H019 292 aa9□□□□□ -0.97
CCDC6-203ENST00000518638 CABP1Q9NZU7 370 aa9□□□□□ -0.97
CCDC6-203ENST00000518638 SBF2Q86WG5 1849 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms