RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 NECAB3Q96P71 396 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-207ENST00000518569 NOC4LQ9BVI4 516 aaKnown RBP6.23□□□□□ -1.41
VPS13B-207ENST00000518569 BACH2Q9BYV9 841 aa6.23□□□□□ -1.41
VPS13B-207ENST00000518569 TTF2Q9UNY4 1162 aaKnown RBP6.23□□□□□ -1.41
VPS13B-207ENST00000518569 RECKO95980 971 aa6.22□□□□□ -1.41
VPS13B-207ENST00000518569 CD68P34810 354 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-207ENST00000518569 LDLRAD1Q5T700 205 aa6.22□□□□□ -1.41
VPS13B-207ENST00000518569 IGF2-ASQ6U949 168 aa6.22□□□□□ -1.41
VPS13B-207ENST00000518569 GALNT11Q8NCW6 608 aa6.22□□□□□ -1.41
VPS13B-207ENST00000518569 SLC7A3Q8WY07 619 aa6.22□□□□□ -1.41
VPS13B-207ENST00000518569 ZNF428Q96B54 188 aa6.22□□□□□ -1.41
VPS13B-207ENST00000518569 KLHDC7BQ96G42 594 aa6.22□□□□□ -1.41
VPS13B-207ENST00000518569 METTL5Q9NRN9 209 aaKnown RBP6.22□□□□□ -1.41
VPS13B-207ENST00000518569 GPN3Q9UHW5 284 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-207ENST00000518569 E9PSI1 815 aa6.21□□□□□ -1.42
VPS13B-207ENST00000518569 APBA3O96018 575 aa6.21□□□□□ -1.42
VPS13B-207ENST00000518569 RLBP1P12271 317 aa6.21□□□□□ -1.42
VPS13B-207ENST00000518569 GATA4P43694 442 aa6.21□□□□□ -1.42
VPS13B-207ENST00000518569 AP3B2Q13367 1082 aa6.21□□□□□ -1.42
VPS13B-207ENST00000518569 MEI1Q5TIA1 1274 aa6.21□□□□□ -1.42
VPS13B-207ENST00000518569 TPTE2Q6XPS3 522 aa6.21□□□□□ -1.42
VPS13B-207ENST00000518569 Q8N3U1 123 aa6.21□□□□□ -1.42
VPS13B-207ENST00000518569 TMEM87AQ8NBN3 555 aa6.21□□□□□ -1.42
VPS13B-207ENST00000518569 NACC1Q96RE7 527 aa6.21□□□□□ -1.42
VPS13B-207ENST00000518569 CARD10Q9BWT7 1032 aa6.21□□□□□ -1.42
VPS13B-207ENST00000518569 SEMA6BQ9H3T3 888 aa6.21□□□□□ -1.42
VPS13B-207ENST00000518569 SAMM50Q9Y512 469 aa6.21□□□□□ -1.42
VPS13B-207ENST00000518569 ENC1O14682 589 aa6.2□□□□□ -1.42
VPS13B-207ENST00000518569 CYP11A1P05108 521 aa6.2□□□□□ -1.42
VPS13B-207ENST00000518569 NME2P22392 152 aa6.2□□□□□ -1.42
VPS13B-207ENST00000518569 GSTM4Q03013 218 aa6.2□□□□□ -1.42
VPS13B-207ENST00000518569 CCDC85BQ15834 202 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-207ENST00000518569 TSNAXIP1Q2TAA8 658 aa6.2□□□□□ -1.42
VPS13B-207ENST00000518569 FOXD4L6Q3SYB3 417 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-207ENST00000518569 HGSNATQ68CP4 663 aa6.2□□□□□ -1.42
VPS13B-207ENST00000518569 FOXD4L3Q6VB84 417 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-207ENST00000518569 NRSN2Q9GZP1 204 aa6.2□□□□□ -1.42
VPS13B-207ENST00000518569 C9orf172C9J069 976 aa6.19□□□□□ -1.42
VPS13B-207ENST00000518569 FAM229AH3BQW9 127 aa6.19□□□□□ -1.42
VPS13B-207ENST00000518569 SCAMP3O14828 347 aaKnown RBP6.19□□□□□ -1.42
VPS13B-207ENST00000518569 HP1BP3Q5SSJ5 553 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-207ENST00000518569 SCARA3Q6AZY7 606 aa6.19□□□□□ -1.42
VPS13B-207ENST00000518569 TMEM130Q8N3G9 435 aa6.19□□□□□ -1.42
VPS13B-207ENST00000518569 LENG1Q96BZ8 264 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-207ENST00000518569 TRIM56Q9BRZ2 755 aaKnown RBP6.19□□□□□ -1.42
VPS13B-207ENST00000518569 EMILIN2Q9BXX0 1053 aa6.19□□□□□ -1.42
VPS13B-207ENST00000518569 MRPL18Q9H0U6 180 aaKnown RBP6.19□□□□□ -1.42
VPS13B-207ENST00000518569 ADAM11O75078 769 aa6.18□□□□□ -1.42
VPS13B-207ENST00000518569 FBXO24O75426 580 aa6.18□□□□□ -1.42
VPS13B-207ENST00000518569 ARNTP27540 789 aa6.18□□□□□ -1.42
VPS13B-207ENST00000518569 ZNF157P51786 506 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-207ENST00000518569 RPS26P62854 115 aaKnown RBP6.18□□□□□ -1.42
VPS13B-207ENST00000518569 NRG1Q02297 640 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-207ENST00000518569 POU4F3Q15319 338 aa6.18□□□□□ -1.42
VPS13B-207ENST00000518569 SULF2Q8IWU5 870 aa6.18□□□□□ -1.42
VPS13B-207ENST00000518569 RSRP1Q9BUV0 290 aa6.18□□□□□ -1.42
VPS13B-207ENST00000518569 KCNK4Q9NYG8 393 aa6.18□□□□□ -1.42
VPS13B-207ENST00000518569 CYP8B1Q9UNU6 501 aa6.18□□□□□ -1.42
VPS13B-207ENST00000518569 MEGF11A6BM72 1044 aa6.17□□□□□ -1.42
VPS13B-207ENST00000518569 CELA3AP09093 270 aa6.17□□□□□ -1.42
VPS13B-207ENST00000518569 SELPP16109 830 aa6.17□□□□□ -1.42
VPS13B-207ENST00000518569 BMP6P22004 513 aa6.17□□□□□ -1.42
VPS13B-207ENST00000518569 NLRP12P59046 1061 aa6.17□□□□□ -1.42
VPS13B-207ENST00000518569 HNRNPUQ00839 825 aaKnown RBP eCLIP6.17□□□□□ -1.42
VPS13B-207ENST00000518569 PWP1Q13610 501 aa6.17□□□□□ -1.42
VPS13B-207ENST00000518569 LRRC14Q15048 493 aa6.17□□□□□ -1.42
VPS13B-207ENST00000518569 GRIK4Q16099 956 aa6.17□□□□□ -1.42
VPS13B-207ENST00000518569 CORO1BQ9BR76 489 aa6.17□□□□□ -1.42
VPS13B-207ENST00000518569 KRT82Q9NSB4 513 aa6.17□□□□□ -1.42
VPS13B-207ENST00000518569 LOC100289279A0A1B0GTE1 492 aa6.16□□□□□ -1.42
VPS13B-207ENST00000518569 DDX3YO15523 660 aaKnown RBP6.16□□□□□ -1.42
VPS13B-207ENST00000518569 PAGE1O75459 146 aa6.16□□□□□ -1.42
VPS13B-207ENST00000518569 GSTP1P09211 210 aaKnown RBP6.16□□□□□ -1.42
VPS13B-207ENST00000518569 MAOBP27338 520 aa6.16□□□□□ -1.42
VPS13B-207ENST00000518569 ZNF76P36508 570 aa6.16□□□□□ -1.42
VPS13B-207ENST00000518569 FANCCQ00597 558 aa6.16□□□□□ -1.42
VPS13B-207ENST00000518569 ZNF252P-AS1Q0IIN9 211 aa6.16□□□□□ -1.42
VPS13B-207ENST00000518569 DUOXA2Q1HG44 320 aa6.16□□□□□ -1.42
VPS13B-207ENST00000518569 ZMYM1Q5SVZ6 1142 aa6.16□□□□□ -1.42
VPS13B-207ENST00000518569 TTBK2Q6IQ55 1244 aa6.16□□□□□ -1.42
VPS13B-207ENST00000518569 HS2ST1Q7LGA3 356 aa6.16□□□□□ -1.42
VPS13B-207ENST00000518569 ERMP1Q7Z2K6 904 aa6.16□□□□□ -1.42
VPS13B-207ENST00000518569 PDZD3Q86UT5 571 aa6.16□□□□□ -1.42
VPS13B-207ENST00000518569 RNF34Q969K3 372 aa6.16□□□□□ -1.42
VPS13B-207ENST00000518569 CACNA2D2Q9NY47 1150 aa6.16□□□□□ -1.42
VPS13B-207ENST00000518569 SYNGAP1Q96PV0 1343 aa6.16□□□□□ -1.42
VPS13B-207ENST00000518569 SCO2A0A1W2PP80 73 aa6.15□□□□□ -1.42
VPS13B-207ENST00000518569 LIG3P49916 1009 aa6.15□□□□□ -1.42
VPS13B-207ENST00000518569 ADGRE1Q14246 886 aa6.15□□□□□ -1.42
VPS13B-207ENST00000518569 EXOSC6Q5RKV6 272 aaKnown RBP6.15□□□□□ -1.42
VPS13B-207ENST00000518569 PCNX4Q63HM2 1172 aa6.15□□□□□ -1.42
VPS13B-207ENST00000518569 SHISA2Q6UWI4 295 aa6.15□□□□□ -1.42
VPS13B-207ENST00000518569 AGMOQ6ZNB7 445 aa6.15□□□□□ -1.42
VPS13B-207ENST00000518569 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.15□□□□□ -1.42
VPS13B-207ENST00000518569 RELL1Q8IUW5 271 aa6.15□□□□□ -1.42
VPS13B-207ENST00000518569 STK35Q8TDR2 534 aa6.15□□□□□ -1.42
VPS13B-207ENST00000518569 UBASH3BQ8TF42 649 aa6.15□□□□□ -1.42
VPS13B-207ENST00000518569 USP26Q9BXU7 913 aa6.15□□□□□ -1.42
VPS13B-207ENST00000518569 IGSF5Q9NSI5 407 aa6.15□□□□□ -1.42
VPS13B-207ENST00000518569 F8W735 103 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms