RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 GJA5P36382 358 aa21.66■■□□□ 1.06
CTNNA1-206ENST00000517980 IREB2P48200 963 aaKnown RBP21.66■■□□□ 1.06
CTNNA1-206ENST00000517980 CACNB3P54284 484 aa21.66■■□□□ 1.06
CTNNA1-206ENST00000517980 TMEM39BQ9GZU3 492 aa21.66■■□□□ 1.06
CTNNA1-206ENST00000517980 SIL1Q9H173 461 aa21.66■■□□□ 1.06
CTNNA1-206ENST00000517980 MANSC4A6NHS7 340 aaPredicted RBP21.65■■□□□ 1.06
CTNNA1-206ENST00000517980 IFIT1P09914 478 aaKnown RBP21.65■■□□□ 1.06
CTNNA1-206ENST00000517980 UBTFL1P0CB47 393 aaPredicted RBP21.65■■□□□ 1.06
CTNNA1-206ENST00000517980 SOX10P56693 466 aa21.65■■□□□ 1.06
CTNNA1-206ENST00000517980 ATG9AQ7Z3C6 839 aa21.65■■□□□ 1.06
CTNNA1-206ENST00000517980 TEPSINQ96N21 525 aa21.65■■□□□ 1.06
CTNNA1-206ENST00000517980 TNFAIP1Q13829 316 aa21.64■■□□□ 1.05
CTNNA1-206ENST00000517980 PUM3Q15397 648 aaKnown RBP21.64■■□□□ 1.05
CTNNA1-206ENST00000517980 IFNL1Q8IU54 200 aa21.64■■□□□ 1.05
CTNNA1-206ENST00000517980 TBC1D22AQ8WUA7 517 aa21.64■■□□□ 1.05
CTNNA1-206ENST00000517980 ELP3Q9H9T3 547 aa21.64■■□□□ 1.05
CTNNA1-206ENST00000517980 IGF2BP3O00425 579 aaKnown RBP eCLIP21.63■■□□□ 1.05
CTNNA1-206ENST00000517980 INHBEP58166 350 aa21.63■■□□□ 1.05
CTNNA1-206ENST00000517980 ANKRD13AQ8IZ07 590 aa21.63■■□□□ 1.05
CTNNA1-206ENST00000517980 HPS5Q9UPZ3 1129 aa21.63■■□□□ 1.05
CTNNA1-206ENST00000517980 FKTNO75072 461 aa21.62■■□□□ 1.05
CTNNA1-206ENST00000517980 ZBTB48P10074 688 aaPredicted RBP21.62■■□□□ 1.05
CTNNA1-206ENST00000517980 SLC5A1P13866 664 aa21.62■■□□□ 1.05
CTNNA1-206ENST00000517980 CNKSR2Q8WXI2 1034 aa21.62■■□□□ 1.05
CTNNA1-206ENST00000517980 LPIN2Q92539 896 aa21.62■■□□□ 1.05
CTNNA1-206ENST00000517980 TEKT1Q969V4 418 aa21.62■■□□□ 1.05
CTNNA1-206ENST00000517980 PA2G4Q9UQ80 394 aaKnown RBP21.62■■□□□ 1.05
CTNNA1-206ENST00000517980 LRRFIP2Q9Y608 721 aaKnown RBP21.62■■□□□ 1.05
CTNNA1-206ENST00000517980 ARAP2Q8WZ64 1704 aa21.62■■□□□ 1.05
CTNNA1-206ENST00000517980 CCER2I3L3R5 266 aa21.61■■□□□ 1.05
CTNNA1-206ENST00000517980 TNNI2P48788 182 aa21.61■■□□□ 1.05
CTNNA1-206ENST00000517980 HDLBPQ00341 1268 aaKnown RBP21.61■■□□□ 1.05
CTNNA1-206ENST00000517980 ALDH1A1P00352 501 aa21.6■■□□□ 1.05
CTNNA1-206ENST00000517980 RARSP54136 660 aaKnown RBP21.6■■□□□ 1.05
CTNNA1-206ENST00000517980 APOBEC3HQ6NTF7 200 aaKnown RBP21.6■■□□□ 1.05
CTNNA1-206ENST00000517980 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.6■■□□□ 1.05
CTNNA1-206ENST00000517980 OPTNQ96CV9 577 aa21.6■■□□□ 1.05
CTNNA1-206ENST00000517980 MEIS3Q99687 375 aa21.6■■□□□ 1.05
CTNNA1-206ENST00000517980 PTPN18Q99952 460 aa21.6■■□□□ 1.05
CTNNA1-206ENST00000517980 CFHR5Q9BXR6 569 aa21.6■■□□□ 1.05
CTNNA1-206ENST00000517980 API5Q9BZZ5 524 aaKnown RBP21.6■■□□□ 1.05
CTNNA1-206ENST00000517980 CEP126Q9P2H0 1117 aa21.6■■□□□ 1.05
CTNNA1-206ENST00000517980 MYH13Q9UKX3 1938 aa21.6■■□□□ 1.05
CTNNA1-206ENST00000517980 UNCXA6NJT0 531 aa21.59■■□□□ 1.05
CTNNA1-206ENST00000517980 CT47B1P0C2W7 299 aaPredicted RBP21.59■■□□□ 1.05
CTNNA1-206ENST00000517980 PKN2Q16513 984 aaKnown RBP21.59■■□□□ 1.05
CTNNA1-206ENST00000517980 NOM1Q5C9Z4 860 aaKnown RBP21.59■■□□□ 1.05
CTNNA1-206ENST00000517980 ZDHHC15Q96MV8 337 aa21.59■■□□□ 1.05
CTNNA1-206ENST00000517980 MRIQ9BWK5 157 aa21.59■■□□□ 1.05
CTNNA1-206ENST00000517980 OTOFQ9HC10 1997 aa21.59■■□□□ 1.05
CTNNA1-206ENST00000517980 AK9Q5TCS8 1911 aa21.59■■□□□ 1.05
CTNNA1-206ENST00000517980 MAP3K9P80192 1104 aa21.58■■□□□ 1.05
CTNNA1-206ENST00000517980 PDE4DIPQ5VU43 2346 aa21.58■■□□□ 1.04
CTNNA1-206ENST00000517980 ATP2B3Q16720 1220 aa21.57■■□□□ 1.04
CTNNA1-206ENST00000517980 WDR66Q8TBY9 1149 aa21.57■■□□□ 1.04
CTNNA1-206ENST00000517980 KIF16BQ96L93 1317 aa21.56■■□□□ 1.04
CTNNA1-206ENST00000517980 VGLL4Q14135 290 aa21.56■■□□□ 1.04
CTNNA1-206ENST00000517980 HHIPL2Q6UWX4 724 aa21.56■■□□□ 1.04
CTNNA1-206ENST00000517980 MS4A4AQ96JQ5 239 aa21.56■■□□□ 1.04
CTNNA1-206ENST00000517980 TMOD2Q9NZR1 351 aa21.56■■□□□ 1.04
CTNNA1-206ENST00000517980 TNNQ9UQP3 1299 aa21.56■■□□□ 1.04
CTNNA1-206ENST00000517980 SUGT1Q9Y2Z0 365 aa21.56■■□□□ 1.04
CTNNA1-206ENST00000517980 TNRC18O15417 2968 aaPredicted RBP21.55■■□□□ 1.04
CTNNA1-206ENST00000517980 CIAO1O76071 339 aa21.55■■□□□ 1.04
CTNNA1-206ENST00000517980 PHKA1P46020 1223 aa21.55■■□□□ 1.04
CTNNA1-206ENST00000517980 CRHR2Q13324 411 aa21.55■■□□□ 1.04
CTNNA1-206ENST00000517980 DIXDC1Q155Q3 683 aa21.55■■□□□ 1.04
CTNNA1-206ENST00000517980 OTUD7BQ6GQQ9 843 aa21.55■■□□□ 1.04
CTNNA1-206ENST00000517980 FBXO46Q6PJ61 603 aaPredicted RBP21.55■■□□□ 1.04
CTNNA1-206ENST00000517980 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.55■■□□□ 1.04
CTNNA1-206ENST00000517980 TESPA1A2RU30 521 aaPredicted RBP21.54■■□□□ 1.04
CTNNA1-206ENST00000517980 PRDX5P30044 214 aa21.54■■□□□ 1.04
CTNNA1-206ENST00000517980 ADORA1P30542 326 aa21.54■■□□□ 1.04
CTNNA1-206ENST00000517980 TIMM10P62072 90 aa21.54■■□□□ 1.04
CTNNA1-206ENST00000517980 MIGA2Q7L4E1 593 aa21.54■■□□□ 1.04
CTNNA1-206ENST00000517980 ZKSCAN4Q969J2 545 aaPredicted RBP21.54■■□□□ 1.04
CTNNA1-206ENST00000517980 OTUD5Q96G74 571 aa21.54■■□□□ 1.04
CTNNA1-206ENST00000517980 FBXO3Q9UK99 471 aa21.54■■□□□ 1.04
CTNNA1-206ENST00000517980 TRIM17Q9Y577 477 aa21.54■■□□□ 1.04
CTNNA1-206ENST00000517980 CSADQ9Y600 493 aa21.54■■□□□ 1.04
CTNNA1-206ENST00000517980 MAST3O60307 1309 aa21.54■■□□□ 1.04
CTNNA1-206ENST00000517980 BCAR3O75815 825 aa21.53■■□□□ 1.04
CTNNA1-206ENST00000517980 IL15P40933 162 aaPredicted RBP21.53■■□□□ 1.04
CTNNA1-206ENST00000517980 TCP10Q12799 353 aa21.53■■□□□ 1.04
CTNNA1-206ENST00000517980 INTS3Q68E01 1043 aaKnown RBP21.53■■□□□ 1.04
CTNNA1-206ENST00000517980 FAM83AQ86UY5 434 aa21.53■■□□□ 1.04
CTNNA1-206ENST00000517980 CD99L2Q8TCZ2 262 aa21.53■■□□□ 1.04
CTNNA1-206ENST00000517980 BRI3BPQ8WY22 251 aa21.53■■□□□ 1.04
CTNNA1-206ENST00000517980 HDAC5Q9UQL6 1122 aa21.53■■□□□ 1.04
CTNNA1-206ENST00000517980 LAMB1P07942 1786 aa21.52■■□□□ 1.04
CTNNA1-206ENST00000517980 CDC42EP5Q6NZY7 148 aa21.52■■□□□ 1.04
CTNNA1-206ENST00000517980 WRNIP1Q96S55 665 aa21.52■■□□□ 1.04
CTNNA1-206ENST00000517980 COPRSQ9NQ92 184 aa21.52■■□□□ 1.04
CTNNA1-206ENST00000517980 GNL3LQ9NVN8 582 aaKnown RBP21.52■■□□□ 1.04
CTNNA1-206ENST00000517980 DAGLAQ9Y4D2 1042 aa21.52■■□□□ 1.04
CTNNA1-206ENST00000517980 CCL15-CCL14A0A0B4J2E2 113 aa21.51■■□□□ 1.03
CTNNA1-206ENST00000517980 LDHBP07195 334 aaKnown RBP21.51■■□□□ 1.03
CTNNA1-206ENST00000517980 CAP1Q01518 475 aa21.51■■□□□ 1.03
CTNNA1-206ENST00000517980 CCL15Q16663 113 aa21.51■■□□□ 1.03
CTNNA1-206ENST00000517980 FKBP1CQ5VVH2 108 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms