RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 BRF1Q92994 677 aa12.7□□□□□ -0.38
SPIDR-204ENST00000517824 LLPHQ9BRT6 129 aaKnown RBP12.7□□□□□ -0.38
SPIDR-204ENST00000517824 BAZ2AQ9UIF9 1905 aaKnown RBP12.7□□□□□ -0.38
SPIDR-204ENST00000517824 TNRC6CQ9HCJ0 1690 aaKnown RBP12.7□□□□□ -0.38
SPIDR-204ENST00000517824 RPS6KA4O75676 772 aa12.69□□□□□ -0.38
SPIDR-204ENST00000517824 PDE6AP16499 860 aa12.69□□□□□ -0.38
SPIDR-204ENST00000517824 KRT85P78386 507 aa12.69□□□□□ -0.38
SPIDR-204ENST00000517824 UBE3CQ15386 1083 aa12.69□□□□□ -0.38
SPIDR-204ENST00000517824 ZSCAN23Q3MJ62 389 aa12.69□□□□□ -0.38
SPIDR-204ENST00000517824 ERFEQ4G0M1 354 aa12.69□□□□□ -0.38
SPIDR-204ENST00000517824 CAVIN4Q5BKX8 364 aa12.69□□□□□ -0.38
SPIDR-204ENST00000517824 PI16Q6UXB8 463 aa12.69□□□□□ -0.38
SPIDR-204ENST00000517824 OSBP2Q969R2 916 aa12.69□□□□□ -0.38
SPIDR-204ENST00000517824 NACAP1Q9BZK3 213 aa12.69□□□□□ -0.38
SPIDR-204ENST00000517824 SEC31BQ9NQW1 1179 aa12.69□□□□□ -0.38
SPIDR-204ENST00000517824 NARFQ9UHQ1 456 aa12.69□□□□□ -0.38
SPIDR-204ENST00000517824 MYH2Q9UKX2 1941 aa12.68□□□□□ -0.38
SPIDR-204ENST00000517824 ZNF532Q9HCE3 1301 aa12.68□□□□□ -0.38
SPIDR-204ENST00000517824 GOLGA6L4A6NEF3 574 aa12.68□□□□□ -0.38
SPIDR-204ENST00000517824 DHX16O60231 1041 aaKnown RBP12.68□□□□□ -0.38
SPIDR-204ENST00000517824 GRIN3BO60391 1043 aa12.68□□□□□ -0.38
SPIDR-204ENST00000517824 CHGBP05060 677 aa12.68□□□□□ -0.38
SPIDR-204ENST00000517824 HMGB2P26583 209 aaKnown RBP12.68□□□□□ -0.38
SPIDR-204ENST00000517824 MCM5P33992 734 aa12.68□□□□□ -0.38
SPIDR-204ENST00000517824 HAND2P61296 217 aa12.68□□□□□ -0.38
SPIDR-204ENST00000517824 CHRNDQ07001 517 aa12.68□□□□□ -0.38
SPIDR-204ENST00000517824 PIH1D3Q9NQM4 214 aaKnown RBP12.68□□□□□ -0.38
SPIDR-204ENST00000517824 LRP2BPQ9P2M1 347 aa12.68□□□□□ -0.38
SPIDR-204ENST00000517824 BRPF3Q9ULD4 1205 aa12.68□□□□□ -0.38
SPIDR-204ENST00000517824 CNPY2Q9Y2B0 182 aa12.68□□□□□ -0.38
SPIDR-204ENST00000517824 DUOX1Q9NRD9 1551 aa12.68□□□□□ -0.38
SPIDR-204ENST00000517824 NAV1Q8NEY1 1877 aa12.68□□□□□ -0.38
SPIDR-204ENST00000517824 GNAT2P19087 354 aa12.67□□□□□ -0.38
SPIDR-204ENST00000517824 FGFR2P21802 821 aa12.67□□□□□ -0.38
SPIDR-204ENST00000517824 RFC4P35249 363 aa12.67□□□□□ -0.38
SPIDR-204ENST00000517824 ZNF445P59923 1031 aa12.67□□□□□ -0.38
SPIDR-204ENST00000517824 SLFNL1Q499Z3 407 aa12.67□□□□□ -0.38
SPIDR-204ENST00000517824 SMIM5Q71RC9 77 aa12.67□□□□□ -0.38
SPIDR-204ENST00000517824 MAGEB6Q8N7X4 407 aa12.67□□□□□ -0.38
SPIDR-204ENST00000517824 TMEM87AQ8NBN3 555 aa12.67□□□□□ -0.38
SPIDR-204ENST00000517824 TRIM44Q96DX7 344 aaPredicted RBP12.67□□□□□ -0.38
SPIDR-204ENST00000517824 NLRP3Q96P20 1036 aa12.67□□□□□ -0.38
SPIDR-204ENST00000517824 LRRC2Q9BYS8 371 aa12.67□□□□□ -0.38
SPIDR-204ENST00000517824 NAPBQ9H115 298 aa12.67□□□□□ -0.38
SPIDR-204ENST00000517824 MTMR6Q9Y217 621 aa12.67□□□□□ -0.38
SPIDR-204ENST00000517824 CD2APQ9Y5K6 639 aa12.67□□□□□ -0.38
SPIDR-204ENST00000517824 TAF6LQ9Y6J9 622 aa12.67□□□□□ -0.38
SPIDR-204ENST00000517824 CARMIL3Q8ND23 1372 aa12.67□□□□□ -0.38
SPIDR-204ENST00000517824 WDR19Q8NEZ3 1342 aa12.66□□□□□ -0.38
SPIDR-204ENST00000517824 GOLGA8BA8MQT2 603 aa12.66□□□□□ -0.38
SPIDR-204ENST00000517824 PRC1O43663 620 aa12.66□□□□□ -0.38
SPIDR-204ENST00000517824 PFKFB2O60825 505 aa12.66□□□□□ -0.38
SPIDR-204ENST00000517824 LETM1O95202 739 aaPredicted RBP12.66□□□□□ -0.38
SPIDR-204ENST00000517824 TDO2P48775 406 aa12.66□□□□□ -0.38
SPIDR-204ENST00000517824 NASPP49321 788 aaPredicted RBP12.66□□□□□ -0.38
SPIDR-204ENST00000517824 UBE2HP62256 183 aa12.66□□□□□ -0.38
SPIDR-204ENST00000517824 CACNB1Q02641 598 aaPredicted RBP12.66□□□□□ -0.38
SPIDR-204ENST00000517824 APOBRQ0VD83 1088 aa12.66□□□□□ -0.38
SPIDR-204ENST00000517824 RASGRF1Q13972 1273 aa12.66□□□□□ -0.38
SPIDR-204ENST00000517824 CPLX2Q6PUV4 134 aaKnown RBP12.66□□□□□ -0.38
SPIDR-204ENST00000517824 TPTE2Q6XPS3 522 aa12.66□□□□□ -0.38
SPIDR-204ENST00000517824 STOX1Q6ZVD7 989 aa12.66□□□□□ -0.38
SPIDR-204ENST00000517824 USP48Q86UV5 1035 aa12.66□□□□□ -0.38
SPIDR-204ENST00000517824 FLAD1Q8NFF5 587 aa12.66□□□□□ -0.38
SPIDR-204ENST00000517824 ANKRD2Q9GZV1 360 aa12.66□□□□□ -0.38
SPIDR-204ENST00000517824 CACNA1SQ13698 1873 aa12.65□□□□□ -0.38
SPIDR-204ENST00000517824 ZMYM6O95789 1325 aa12.65□□□□□ -0.38
SPIDR-204ENST00000517824 CPLX1O14810 134 aa12.65□□□□□ -0.38
SPIDR-204ENST00000517824 MBD4O95243 580 aa12.65□□□□□ -0.38
SPIDR-204ENST00000517824 UBE4AQ14139 1066 aa12.65□□□□□ -0.38
SPIDR-204ENST00000517824 SF3B3Q15393 1217 aaKnown RBP12.65□□□□□ -0.38
SPIDR-204ENST00000517824 TPRNQ4KMQ1 711 aa12.65□□□□□ -0.38
SPIDR-204ENST00000517824 CCDC183Q5T5S1 534 aa12.65□□□□□ -0.38
SPIDR-204ENST00000517824 TBC1D9BQ66K14 1250 aa12.65□□□□□ -0.38
SPIDR-204ENST00000517824 GPT2Q8TD30 523 aa12.65□□□□□ -0.38
SPIDR-204ENST00000517824 PUS7LQ9H0K6 701 aaKnown RBP12.65□□□□□ -0.38
SPIDR-204ENST00000517824 GDPD2Q9HCC8 539 aa12.65□□□□□ -0.38
SPIDR-204ENST00000517824 RAI14Q9P0K7 980 aa12.65□□□□□ -0.38
SPIDR-204ENST00000517824 RBM27Q9P2N5 1060 aaKnown RBP12.65□□□□□ -0.38
SPIDR-204ENST00000517824 WWC3Q9ULE0 1092 aa12.65□□□□□ -0.38
SPIDR-204ENST00000517824 DLEC1Q9Y238 1755 aa12.65□□□□□ -0.38
SPIDR-204ENST00000517824 PTPDC1A2A3K4 754 aa12.64□□□□□ -0.39
SPIDR-204ENST00000517824 CDKL5O76039 1030 aa12.64□□□□□ -0.39
SPIDR-204ENST00000517824 FGAP02671 866 aa12.64□□□□□ -0.39
SPIDR-204ENST00000517824 XRCC6P12956 609 aaKnown RBP eCLIP12.64□□□□□ -0.39
SPIDR-204ENST00000517824 ST3GAL1Q11201 340 aa12.64□□□□□ -0.39
SPIDR-204ENST00000517824 SART3Q15020 963 aaKnown RBP12.64□□□□□ -0.39
SPIDR-204ENST00000517824 TRAPPC3LQ5T215 181 aa12.64□□□□□ -0.39
SPIDR-204ENST00000517824 TTLL5Q6EMB2 1281 aa12.64□□□□□ -0.39
SPIDR-204ENST00000517824 NFXL1Q6ZNB6 911 aa12.64□□□□□ -0.39
SPIDR-204ENST00000517824 CDC37L1Q7L3B6 337 aa12.64□□□□□ -0.39
SPIDR-204ENST00000517824 DDX11Q96FC9 970 aa12.64□□□□□ -0.39
SPIDR-204ENST00000517824 ZNF274Q96GC6 653 aaPredicted RBP12.64□□□□□ -0.39
SPIDR-204ENST00000517824 SCAND2PQ9GZW5 306 aaPredicted RBP12.64□□□□□ -0.39
SPIDR-204ENST00000517824 TSPY26PQ9H489 355 aa12.64□□□□□ -0.39
SPIDR-204ENST00000517824 ZSCAN16Q9H4T2 348 aaPredicted RBP12.64□□□□□ -0.39
SPIDR-204ENST00000517824 CNNM2Q9H8M5 875 aa12.64□□□□□ -0.39
SPIDR-204ENST00000517824 BSDC1Q9NW68 430 aaPredicted RBP12.64□□□□□ -0.39
SPIDR-204ENST00000517824 SRP68Q9UHB9 627 aaKnown RBP12.64□□□□□ -0.39
SPIDR-204ENST00000517824 DENND2AQ9ULE3 1009 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms